A citation-based method for searching scientific literature

Minsoo Kim, Jillian R Haney, Pan Zhang, Leanna M Hernandez, Lee-Kai Wang, Laura Perez-Cano, Loes M Olde Loohuis, Luis de la Torre-Ubieta, Michael J Gandal. Nat Neurosci 2021
Times Cited: 3







List of co-cited articles
5 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


The complement system: an unexpected role in synaptic pruning during development and disease.
Alexander H Stephan, Ben A Barres, Beth Stevens. Annu Rev Neurosci 2012
532
66

The classical complement cascade mediates CNS synapse elimination.
Beth Stevens, Nicola J Allen, Luis E Vazquez, Gareth R Howell, Karen S Christopherson, Navid Nouri, Kristina D Micheva, Adrienne K Mehalow, Andrew D Huberman, Benjamin Stafford,[...]. Cell 2007
66


Schizophrenia risk from complex variation of complement component 4.
Aswin Sekar, Allison R Bialas, Heather de Rivera, Avery Davis, Timothy R Hammond, Nolan Kamitaki, Katherine Tooley, Jessy Presumey, Matthew Baum, Vanessa Van Doren,[...]. Nature 2016
66

Microglia sculpt postnatal neural circuits in an activity and complement-dependent manner.
Dorothy P Schafer, Emily K Lehrman, Amanda G Kautzman, Ryuta Koyama, Alan R Mardinly, Ryo Yamasaki, Richard M Ransohoff, Michael E Greenberg, Ben A Barres, Beth Stevens. Neuron 2012
66

Interactions between ALS-linked FUS and nucleoporins are associated with defects in the nucleocytoplasmic transport pathway.
Yen-Chen Lin, Meenakshi Sundaram Kumar, Nandini Ramesh, Eric N Anderson, Aivi T Nguyen, Boram Kim, Simon Cheung, Justin A McDonough, William C Skarnes, Rodrigo Lopez-Gonzalez,[...]. Nat Neurosci 2021
2
50

CNV analysis in a large schizophrenia sample implicates deletions at 16p12.1 and SLC1A1 and duplications at 1p36.33 and CGNL1.
Elliott Rees, James T R Walters, Kimberly D Chambert, Colm O'Dushlaine, Jin Szatkiewicz, Alexander L Richards, Lyudmila Georgieva, Gerwyn Mahoney-Davies, Sophie E Legge, Jennifer L Moran,[...]. Hum Mol Genet 2014
56
33

Different distribution patterns of lymphocytes and microglia in the hippocampus of patients with residual versus paranoid schizophrenia: further evidence for disease course-related immune alterations?
Stefan Busse, Mandy Busse, Kolja Schiltz, Hendrik Bielau, Tomasz Gos, Ralf Brisch, Christian Mawrin, Andrea Schmitt, Wolfgang Jordan, Ulf J Müller,[...]. Brain Behav Immun 2012
103
33

Spatial and temporal mapping of de novo mutations in schizophrenia to a fetal prefrontal cortical network.
Suleyman Gulsuner, Tom Walsh, Amanda C Watts, Ming K Lee, Anne M Thornton, Silvia Casadei, Caitlin Rippey, Hashem Shahin, Vishwajit L Nimgaonkar, Rodney C P Go,[...]. Cell 2013
341
33

De novo mutations in schizophrenia implicate chromatin remodeling and support a genetic overlap with autism and intellectual disability.
S E McCarthy, J Gillis, M Kramer, J Lihm, S Yoon, Y Berstein, M Mistry, P Pavlidis, R Solomon, E Ghiban,[...]. Mol Psychiatry 2014
229
33

Gene ontology analysis for RNA-seq: accounting for selection bias.
Matthew D Young, Matthew J Wakefield, Gordon K Smyth, Alicia Oshlack. Genome Biol 2010
33



Transcriptome sequencing and genome-wide association analyses reveal lysosomal function and actin cytoskeleton remodeling in schizophrenia and bipolar disorder.
Zhongming Zhao, Jiabao Xu, Jingchun Chen, Sanghyeon Kim, Mark Reimers, Silviu-Alin Bacanu, Hui Yu, Chunyu Liu, Jingchun Sun, Quan Wang,[...]. Mol Psychiatry 2015
90
33


Complement activation in the central nervous system following blood-brain barrier damage in man.
P J Lindsberg, J Ohman, T Lehto, M L Karjalainen-Lindsberg, A Paetau, T Wuorimaa, O Carpén, M Kaste, S Meri. Ann Neurol 1996
116
33

RNA-Seq and human complex diseases: recent accomplishments and future perspectives.
Valerio Costa, Marianna Aprile, Roberta Esposito, Alfredo Ciccodicola. Eur J Hum Genet 2013
115
33

Heritability estimates for psychotic disorders: the Maudsley twin psychosis series.
A G Cardno, E J Marshall, B Coid, A M Macdonald, T R Ribchester, N J Davies, P Venturi, L A Jones, S W Lewis, P C Sham,[...]. Arch Gen Psychiatry 1999
515
33


CellMix: a comprehensive toolbox for gene expression deconvolution.
Renaud Gaujoux, Cathal Seoighe. Bioinformatics 2013
117
33

Complement System Part II: Role in Immunity.
Nicolas S Merle, Remi Noe, Lise Halbwachs-Mecarelli, Veronique Fremeaux-Bacchi, Lubka T Roumenina. Front Immunol 2015
404
33

Increased Macrophages and C1qA, C3, C4 Transcripts in the Midbrain of People With Schizophrenia.
Tertia D Purves-Tyson, Kate Robinson, Amelia M Brown, Danny Boerrigter, Helen Q Cai, Christin Weissleder, Samantha J Owens, Debora A Rothmond, Cynthia Shannon Weickert. Front Immunol 2020
11
33

Immune involvement in the pathogenesis of schizophrenia: a meta-analysis on postmortem brain studies.
C F M G van Kesteren, H Gremmels, L D de Witte, E M Hol, A R Van Gool, P G Falkai, R S Kahn, I E C Sommer. Transl Psychiatry 2017
137
33

Increased inflammatory markers identified in the dorsolateral prefrontal cortex of individuals with schizophrenia.
S G Fillman, N Cloonan, V S Catts, L C Miller, J Wong, T McCrossin, M Cairns, C S Weickert. Mol Psychiatry 2013
335
33

Molecular evidence for increased expression of genes related to immune and chaperone function in the prefrontal cortex in schizophrenia.
Dominique Arion, Travis Unger, David A Lewis, Pat Levitt, Károly Mirnics. Biol Psychiatry 2007
237
33

Complement and microglia mediate early synapse loss in Alzheimer mouse models.
Soyon Hong, Victoria F Beja-Glasser, Bianca M Nfonoyim, Arnaud Frouin, Shaomin Li, Saranya Ramakrishnan, Katherine M Merry, Qiaoqiao Shi, Arnon Rosenthal, Ben A Barres,[...]. Science 2016
33


The cerebral microvasculature in schizophrenia: a laser capture microdissection study.
Laura W Harris, Matthew Wayland, Martin Lan, Margaret Ryan, Thomas Giger, Helen Lockstone, Irene Wuethrich, Michael Mimmack, Lan Wang, Mark Kotter,[...]. PLoS One 2008
65
33

STAR: ultrafast universal RNA-seq aligner.
Alexander Dobin, Carrie A Davis, Felix Schlesinger, Jorg Drenkow, Chris Zaleski, Sonali Jha, Philippe Batut, Mark Chaisson, Thomas R Gingeras. Bioinformatics 2013
33

Robust enumeration of cell subsets from tissue expression profiles.
Aaron M Newman, Chih Long Liu, Michael R Green, Andrew J Gentles, Weiguo Feng, Yue Xu, Chuong D Hoang, Maximilian Diehn, Ash A Alizadeh. Nat Methods 2015
33

Complement activation, regulation, and molecular basis for complement-related diseases.
Goran Bajic, Søren E Degn, Steffen Thiel, Gregers R Andersen. EMBO J 2015
152
33

The penetrance of copy number variations for schizophrenia and developmental delay.
George Kirov, Elliott Rees, James T R Walters, Valentina Escott-Price, Lyudmila Georgieva, Alexander L Richards, Kimberly D Chambert, Gerwyn Davies, Sophie E Legge, Jennifer L Moran,[...]. Biol Psychiatry 2014
201
33

Increased exonic de novo mutation rate in individuals with schizophrenia.
Simon L Girard, Julie Gauthier, Anne Noreau, Lan Xiong, Sirui Zhou, Loubna Jouan, Alexandre Dionne-Laporte, Dan Spiegelman, Edouard Henrion, Ousmane Diallo,[...]. Nat Genet 2011
272
33

Inflammation-related genes up-regulated in schizophrenia brains.
Peter Saetre, Lina Emilsson, Elin Axelsson, Johan Kreuger, Eva Lindholm, Elena Jazin. BMC Psychiatry 2007
186
33

Immune attack: the role of inflammation in Alzheimer disease.
Frank L Heppner, Richard M Ransohoff, Burkhard Becher. Nat Rev Neurosci 2015
33

Increased densities of T and B lymphocytes indicate neuroinflammation in subgroups of schizophrenia and mood disorder patients.
Konstantin Schlaaff, Henrik Dobrowolny, Thomas Frodl, Christian Mawrin, Tomasz Gos, Johann Steiner, Bernhard Bogerts. Brain Behav Immun 2020
6
33

Quantitative analysis of focused a-to-I RNA editing sites by ultra-high-throughput sequencing in psychiatric disorders.
Hu Zhu, Daniel J Urban, Jared Blashka, Matthew T McPheeters, Wesley K Kroeze, Piotr Mieczkowski, James C Overholser, George J Jurjus, Lesa Dieter, Gouri J Mahajan,[...]. PLoS One 2012
30
33

Gene expression elucidates functional impact of polygenic risk for schizophrenia.
Menachem Fromer, Panos Roussos, Solveig K Sieberts, Jessica S Johnson, David H Kavanagh, Thanneer M Perumal, Douglas M Ruderfer, Edwin C Oh, Aaron Topol, Hardik R Shah,[...]. Nat Neurosci 2016
456
33

Gene expression analysis in schizophrenia: reproducible up-regulation of several members of the apolipoprotein L family located in a high-susceptibility locus for schizophrenia on chromosome 22.
Michael L Mimmack, Margaret Ryan, Hajime Baba, Juani Navarro-Ruiz, Shuji Iritani, Richard L M Faull, Peter J McKenna, Peter B Jones, Heii Arai, Michael Starkey,[...]. Proc Natl Acad Sci U S A 2002
132
33


Transcription and pathway analysis of the superior temporal cortex and anterior prefrontal cortex in schizophrenia.
Michael R Barnes, Julie Huxley-Jones, Peter R Maycox, Mark Lennon, Amy Thornber, Fiona Kelly, Stewart Bates, Adam Taylor, Juliet Reid, Neil Jones,[...]. J Neurosci Res 2011
46
33

De novo gene mutations highlight patterns of genetic and neural complexity in schizophrenia.
Bin Xu, Iuliana Ionita-Laza, J Louw Roos, Braden Boone, Scarlet Woodrick, Yan Sun, Shawn Levy, Joseph A Gogos, Maria Karayiorgou. Nat Genet 2012
289
33

De novo mutations in schizophrenia implicate synaptic networks.
Menachem Fromer, Andrew J Pocklington, David H Kavanagh, Hywel J Williams, Sarah Dwyer, Padhraig Gormley, Lyudmila Georgieva, Elliott Rees, Priit Palta, Douglas M Ruderfer,[...]. Nature 2014
969
33

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2.
Michael I Love, Wolfgang Huber, Simon Anders. Genome Biol 2014
33

Copy number variation in schizophrenia in Sweden.
J P Szatkiewicz, C O'Dushlaine, G Chen, K Chambert, J L Moran, B M Neale, M Fromer, D Ruderfer, S Akterin, S E Bergen,[...]. Mol Psychiatry 2014
161
33

Transcriptome-wide isoform-level dysregulation in ASD, schizophrenia, and bipolar disorder.
Michael J Gandal, Pan Zhang, Evi Hadjimichael, Rebecca L Walker, Chao Chen, Shuang Liu, Hyejung Won, Harm van Bakel, Merina Varghese, Yongjun Wang,[...]. Science 2018
311
33

E-selectin and intercellular adhesion molecule-1 are released by activated human endothelial cells in vitro.
J F Leeuwenberg, E F Smeets, J J Neefjes, M A Shaffer, T Cinek, T M Jeunhomme, T J Ahern, W A Buurman. Immunology 1992
443
33

HTSeq--a Python framework to work with high-throughput sequencing data.
Simon Anders, Paul Theodor Pyl, Wolfgang Huber. Bioinformatics 2015
33

WGCNA: an R package for weighted correlation network analysis.
Peter Langfelder, Steve Horvath. BMC Bioinformatics 2008
33

Complement 3 and factor h in human cerebrospinal fluid in Parkinson's disease, Alzheimer's disease, and multiple-system atrophy.
Yu Wang, Aneeka M Hancock, Joshua Bradner, Kathryn A Chung, Joseph F Quinn, Elaine R Peskind, Douglas Galasko, Joseph Jankovic, Cyrus P Zabetian, Hojoong M Kim,[...]. Am J Pathol 2011
68
33


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.