A citation-based method for searching scientific literature

Alix Kerrest, Ranjith P Anand, Rangapriya Sundararajan, Rodrigo Bermejo, Giordano Liberi, Bernard Dujon, Catherine H Freudenreich, Guy-Franck Richard. Nat Struct Mol Biol 2009
Times Cited: 75







List of co-cited articles
1314 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Sae2, Exo1 and Sgs1 collaborate in DNA double-strand break processing.
Eleni P Mimitou, Lorraine S Symington. Nature 2008
708
9

Recombination proteins in yeast.
Berit Olsen Krogh, Lorraine S Symington. Annu Rev Genet 2004
581
9

Sgs1 helicase and two nucleases Dna2 and Exo1 resect DNA double-strand break ends.
Zhu Zhu, Woo-Hyun Chung, Eun Yong Shim, Sang Eun Lee, Grzegorz Ira. Cell 2008
729
9

DNA polymerase stabilization at stalled replication forks requires Mec1 and the RecQ helicase Sgs1.
Jennifer A Cobb, Lotte Bjergbaek, Kenji Shimada, Christian Frei, Susan M Gasser. EMBO J 2003
272
9

SUMOylation regulates Rad18-mediated template switch.
Dana Branzei, Fabio Vanoli, Marco Foiani. Nature 2008
200
9

Yeast Rad5 protein required for postreplication repair has a DNA helicase activity specific for replication fork regression.
András Blastyák, Lajos Pintér, Ildiko Unk, Louise Prakash, Satya Prakash, Lajos Haracska. Mol Cell 2007
210
9


Srs2 disassembles Rad51 filaments by a protein-protein interaction triggering ATP turnover and dissociation of Rad51 from DNA.
Edwin Antony, Eric J Tomko, Qi Xiao, Lumir Krejci, Timothy M Lohman, Tom Ellenberger. Mol Cell 2009
107
9

Stoichiometry of base excision repair proteins correlates with increased somatic CAG instability in striatum over cerebellum in Huntington's disease transgenic mice.
Agathi-Vassiliki Goula, Brian R Berquist, David M Wilson, Vanessa C Wheeler, Yvon Trottier, Karine Merienne. PLoS Genet 2009
102
9

Coordination between polymerase beta and FEN1 can modulate CAG repeat expansion.
Yuan Liu, Rajendra Prasad, William A Beard, Esther W Hou, Julie K Horton, Cynthia T McMurray, Samuel H Wilson. J Biol Chem 2009
86
9

Mismatch recognition protein MutSbeta does not hijack (CAG)n hairpin repair in vitro.
Lei Tian, Caixia Hou, Keli Tian, Nathaniel C Holcomb, Liya Gu, Guo-Min Li. J Biol Chem 2009
39
17

Human MSH2 binds to trinucleotide repeat DNA structures associated with neurodegenerative diseases.
C E Pearson, A Ewel, S Acharya, R A Fishel, R R Sinden. Hum Mol Genet 1997
118
9


Unpaired structures in SCA10 (ATTCT)n.(AGAAT)n repeats.
Vladimir N Potaman, John J Bissler, Vera I Hashem, Elena A Oussatcheva, Lu Lu, Luda S Shlyakhtenko, Yuri L Lyubchenko, Tohru Matsuura, Tetsuo Ashizawa, Michael Leffak,[...]. J Mol Biol 2003
67
10

Srs2 removes deadly recombination intermediates independently of its interaction with SUMO-modified PCNA.
Cyrille Le Breton, Pauline Dupaigne, Thomas Robert, Eric Le Cam, Serge Gangloff, Francis Fabre, Xavier Veaute. Nucleic Acids Res 2008
30
23

Convergent transcription through a long CAG tract destabilizes repeats and induces apoptosis.
Yunfu Lin, Mei Leng, Ma Wan, John H Wilson. Mol Cell Biol 2010
42
16

The yeast Pif1 helicase prevents genomic instability caused by G-quadruplex-forming CEB1 sequences in vivo.
Cyril Ribeyre, Judith Lopes, Jean-Baptiste Boulé, Aurèle Piazza, Aurore Guédin, Virginia A Zakian, Jean-Louis Mergny, Alain Nicolas. PLoS Genet 2009
246
9

Break-induced replication is highly inaccurate.
Angela Deem, Andrea Keszthelyi, Tiffany Blackgrove, Alexandra Vayl, Barbara Coffey, Ruchi Mathur, Andrei Chabes, Anna Malkova. PLoS Biol 2011
186
9


Short Inverted Repeats Are Hotspots for Genetic Instability: Relevance to Cancer Genomes.
Steve Lu, Guliang Wang, Albino Bacolla, Junhua Zhao, Scott Spitser, Karen M Vasquez. Cell Rep 2015
61
11

Disease-associated repeat instability and mismatch repair.
Monika H M Schmidt, Christopher E Pearson. DNA Repair (Amst) 2016
117
9

The role of break-induced replication in large-scale expansions of (CAG)n/(CTG)n repeats.
Jane C Kim, Samantha T Harris, Teresa Dinter, Kartik A Shah, Sergei M Mirkin. Nat Struct Mol Biol 2017
48
14

Z-DNA-forming sequences generate large-scale deletions in mammalian cells.
Guliang Wang, Laura A Christensen, Karen M Vasquez. Proc Natl Acad Sci U S A 2006
117
8


Non-B DNA structure-induced genetic instability.
Guliang Wang, Karen M Vasquez. Mutat Res 2006
139
8

Pms2 is a genetic enhancer of trinucleotide CAG.CTG repeat somatic mosaicism: implications for the mechanism of triplet repeat expansion.
Mário Gomes-Pereira, M Teresa Fortune, Laura Ingram, John P McAbney, Darren G Monckton. Hum Mol Genet 2004
129
8


Initial sequencing and analysis of the human genome.
E S Lander, L M Linton, B Birren, C Nusbaum, M C Zody, J Baldwin, K Devon, K Dewar, M Doyle, W FitzHugh,[...]. Nature 2001
8


Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae.
M S Longtine, A McKenzie, D J Demarini, N G Shah, A Wach, A Brachat, P Philippsen, J R Pringle. Yeast 1998
8


The pattern of gene amplification is determined by the chromosomal location of hairpin-capped breaks.
Vidhya Narayanan, Piotr A Mieczkowski, Hyun-Min Kim, Thomas D Petes, Kirill S Lobachev. Cell 2006
120
8

The Saccharomyces cerevisiae helicase Rrm3p facilitates replication past nonhistone protein-DNA complexes.
Andreas S Ivessa, Brian A Lenzmeier, Jessica B Bessler, Lara K Goudsouzian, Sandra L Schnakenberg, Virginia A Zakian. Mol Cell 2003
304
8

Recovery from checkpoint-mediated arrest after repair of a double-strand break requires Srs2 helicase.
Moreshwar B Vaze, Achille Pellicioli, Sang Eun Lee, Grzegorz Ira, Giordano Liberi, Ayelet Arbel-Eden, Marco Foiani, James E Haber. Mol Cell 2002
255
8

The Srs2 helicase activity is stimulated by Rad51 filaments on dsDNA: implications for crossover incidence during mitotic recombination.
Pauline Dupaigne, Cyrille Le Breton, Francis Fabre, Serge Gangloff, Eric Le Cam, Xavier Veaute. Mol Cell 2008
97
8



Role of ATP hydrolysis in the antirecombinase function of Saccharomyces cerevisiae Srs2 protein.
Lumir Krejci, Margaret Macris, Ying Li, Stephen Van Komen, Jana Villemain, Thomas Ellenberger, Hannah Klein, Patrick Sung. J Biol Chem 2004
60
10

Checkpoint responses to unusual structures formed by DNA repeats.
Irina Voineagu, Catherine H Freudenreich, Sergei M Mirkin. Mol Carcinog 2009
32
18


CTCF cis-regulates trinucleotide repeat instability in an epigenetic manner: a novel basis for mutational hot spot determination.
Randell T Libby, Katharine A Hagerman, Victor V Pineda, Rachel Lau, Diane H Cho, Sandy L Baccam, Michelle M Axford, John D Cleary, James M Moore, Bryce L Sopher,[...]. PLoS Genet 2008
98
8

Isolated short CTG/CAG DNA slip-outs are repaired efficiently by hMutSbeta, but clustered slip-outs are poorly repaired.
Gagan B Panigrahi, Meghan M Slean, Jodie P Simard, Opher Gileadi, Christopher E Pearson. Proc Natl Acad Sci U S A 2010
63
9

Large expansion of the ATTCT pentanucleotide repeat in spinocerebellar ataxia type 10.
T Matsuura, T Yamagata, D L Burgess, A Rasmussen, R P Grewal, K Watase, M Khajavi, A E McCall, C F Davis, L Zu,[...]. Nat Genet 2000
344
8



Srs2: the "Odd-Job Man" in DNA repair.
Victoria Marini, Lumir Krejci. DNA Repair (Amst) 2010
57
10

Intracellular transcription of G-rich DNAs induces formation of G-loops, novel structures containing G4 DNA.
Michelle L Duquette, Priya Handa, Jack A Vincent, Andrew F Taylor, Nancy Maizels. Genes Dev 2004
368
8

Repeat expansion--all in a flap?
D A Gordenin, T A Kunkel, M A Resnick. Nat Genet 1997
176
8

DNA tandem repeat instability in the Escherichia coli chromosome is stimulated by mismatch repair at an adjacent CAG·CTG trinucleotide repeat.
John K Blackwood, Ewa A Okely, Rabaab Zahra, John K Eykelenboom, David R F Leach. Proc Natl Acad Sci U S A 2010
11
54



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.