A citation-based method for searching scientific literature

Kah Wai Lim, Samir Amrane, Serge Bouaziz, Weixin Xu, Yuguang Mu, Dinshaw J Patel, Kim Ngoc Luu, Anh Tuân Phan. J Am Chem Soc 2009
Times Cited: 341







List of co-cited articles
988 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity



Telomeric repeat containing RNA and RNA surveillance factors at mammalian chromosome ends.
Claus M Azzalin, Patrick Reichenbach, Lela Khoriauli, Elena Giulotto, Joachim Lingner. Science 2007
882
7



Guanines are a quartet's best friend: impact of base substitutions on the kinetics and stability of tetramolecular quadruplexes.
Julien Gros, Frédéric Rosu, Samir Amrane, Anne De Cian, Valérie Gabelica, Laurent Lacroix, Jean-Louis Mergny. Nucleic Acids Res 2007
144
7

The Xplor-NIH NMR molecular structure determination package.
Charles D Schwieters, John J Kuszewski, Nico Tjandra, G Marius Clore. J Magn Reson 2003
7

Refinement of the Sugar-Phosphate Backbone Torsion Beta for AMBER Force Fields Improves the Description of Z- and B-DNA.
Marie Zgarbová, Jiří Šponer, Michal Otyepka, Thomas E Cheatham, Rodrigo Galindo-Murillo, Petr Jurečka. J Chem Theory Comput 2015
249
7

G-quadruplex formation in telomeres enhances POT1/TPP1 protection against RPA binding.
Sujay Ray, Jigar N Bandaria, Mohammad H Qureshi, Ahmet Yildiz, Hamza Balci. Proc Natl Acad Sci U S A 2014
97
7

An intramolecular G-quadruplex structure with mixed parallel/antiparallel G-strands formed in the human BCL-2 promoter region in solution.
Jixun Dai, Thomas S Dexheimer, Ding Chen, Megan Carver, Attila Ambrus, Roger A Jones, Danzhou Yang. J Am Chem Soc 2006
306
7

A single-molecule platform for investigation of interactions between G-quadruplexes and small-molecule ligands.
Deepak Koirala, Soma Dhakal, Beth Ashbridge, Yuta Sannohe, Raphaël Rodriguez, Hiroshi Sugiyama, Shankar Balasubramanian, Hanbin Mao. Nat Chem 2011
144
7

Normal human chromosomes have long G-rich telomeric overhangs at one end.
W E Wright, V M Tesmer, K E Huffman, S D Levene, J W Shay. Genes Dev 1997
546
7

Loop permutation affects the topology and stability of G-quadruplexes.
Mingpan Cheng, Yu Cheng, Jingya Hao, Guoqing Jia, Jun Zhou, Jean-Louis Mergny, Can Li. Nucleic Acids Res 2018
42
16

Telomeric overhang length determines structural dynamics and accessibility to telomerase and ALT-associated proteins.
Helen Hwang, Alex Kreig, Jacob Calvert, Justin Lormand, Yongho Kwon, James M Daley, Patrick Sung, Patricia L Opresko, Sua Myong. Structure 2014
47
14

The crystal structure of an antiparallel chair-type G-quadruplex formed by Bromo-substituted human telomeric DNA.
Yanyan Geng, Changdong Liu, Bo Zhou, Qixu Cai, Haitao Miao, Xiao Shi, Naining Xu, Yingying You, Chun Po Fung, Rahman Ud Din,[...]. Nucleic Acids Res 2019
17
41

A Minimal Sequence for Left-Handed G-Quadruplex Formation.
Blaž Bakalar, Brahim Heddi, Emmanuelle Schmitt, Yves Mechulam, Anh Tuân Phan. Angew Chem Int Ed Engl 2019
25
28

G-quadruplex structure of an anti-proliferative DNA sequence.
Ngoc Quang Do, Wan Jun Chung, Thi Hong Anh Truong, Brahim Heddi, Anh Tuân Phan. Nucleic Acids Res 2017
50
14

A crystallographic and modelling study of a human telomeric RNA (TERRA) quadruplex.
Gavin W Collie, Shozeb M Haider, Stephen Neidle, Gary N Parkinson. Nucleic Acids Res 2010
162
7

G-quadruplex formation by human telomeric repeats-containing RNA in Na+ solution.
Yan Xu, Kuniyuki Kaminaga, Makoto Komiyama. J Am Chem Soc 2008
134
7

Coexistence of two distinct G-quadruplex conformations in the hTERT promoter.
Kah Wai Lim, Laurent Lacroix, Doris Jia En Yue, Joefina Kim Cheow Lim, Jocelyn Mei Wen Lim, Anh Tuân Phan. J Am Chem Soc 2010
113
7


The regulation and functions of DNA and RNA G-quadruplexes.
Dhaval Varshney, Jochen Spiegel, Katherine Zyner, David Tannahill, Shankar Balasubramanian. Nat Rev Mol Cell Biol 2020
333
7

Measured and calculated CD spectra of G-quartets stacked with the same or opposite polarities.
Donald M Gray, Jin-Der Wen, Carla W Gray, Rudolf Repges, Charlotte Repges, Gerhard Raabe, Jörg Fleischhauer. Chirality 2008
157
6


Hairpins participating in folding of human telomeric sequence quadruplexes studied by standard and T-REMD simulations.
Petr Stadlbauer, Petra Kührová, Pavel Banáš, Jaroslav Koča, Giovanni Bussi, Lukáš Trantírek, Michal Otyepka, Jiří Šponer. Nucleic Acids Res 2015
36
16

Thioflavin T as an efficient inducer and selective fluorescent sensor for the human telomeric G-quadruplex DNA.
Jyotirmayee Mohanty, Nilotpal Barooah, V Dhamodharan, S Harikrishna, P I Pradeepkumar, Achikanath C Bhasikuttan. J Am Chem Soc 2013
358
6

DNA and RNA quadruplex-binding proteins.
Václav Brázda, Lucia Hároníková, Jack C C Liao, Miroslav Fojta. Int J Mol Sci 2014
169
6

rG4-seq reveals widespread formation of G-quadruplex structures in the human transcriptome.
Chun Kit Kwok, Giovanni Marsico, Aleksandr B Sahakyan, Vicki S Chambers, Shankar Balasubramanian. Nat Methods 2016
210
6

Folding dynamics and conformational heterogeneity of human telomeric G-quadruplex structures in Na+ solutions by single molecule FRET microscopy.
Sofie L Noer, Søren Preus, Daniel Gudnason, Mikayel Aznauryan, Jean-Louis Mergny, Victoria Birkedal. Nucleic Acids Res 2016
45
13

Atomistic picture for the folding pathway of a hybrid-1 type human telomeric DNA G-quadruplex.
Yunqiang Bian, Cheng Tan, Jun Wang, Yuebiao Sheng, Jian Zhang, Wei Wang. PLoS Comput Biol 2014
40
15

Structure of a Stable G-Hairpin.
Martin Gajarský, Martina Lenarčič Živković, Petr Stadlbauer, Bruno Pagano, Radovan Fiala, Jussara Amato, L'ubomír Tomáška, Jiří Šponer, Janez Plavec, Lukáš Trantírek. J Am Chem Soc 2017
28
21

Visualization and selective chemical targeting of RNA G-quadruplex structures in the cytoplasm of human cells.
Giulia Biffi, Marco Di Antonio, David Tannahill, Shankar Balasubramanian. Nat Chem 2014
380
6

Structure of a human telomeric DNA sequence stabilized by 8-bromoguanosine substitutions, as determined by NMR in a K+ solution.
Akimasa Matsugami, Yan Xu, Yuuki Noguchi, Hiroshi Sugiyama, Masato Katahira. FEBS J 2007
73
8

Oxidative DNA damage is epigenetic by regulating gene transcription via base excision repair.
Aaron M Fleming, Yun Ding, Cynthia J Burrows. Proc Natl Acad Sci U S A 2017
197
6


Thermal difference spectra: a specific signature for nucleic acid structures.
Jean-Louis Mergny, Jing Li, Laurent Lacroix, Samir Amrane, Jonathan B Chaires. Nucleic Acids Res 2005
306
6

Telomestatin, a potent telomerase inhibitor that interacts quite specifically with the human telomeric intramolecular g-quadruplex.
Mu-Yong Kim, Hariprasad Vankayalapati, Kazuo Shin-Ya, Konstanty Wierzba, Laurence H Hurley. J Am Chem Soc 2002
383
6


VMD: visual molecular dynamics.
W Humphrey, A Dalke, K Schulten. J Mol Graph 1996
6

A conserved quadruplex motif located in a transcription activation site of the human c-kit oncogene.
Himesh Fernando, Anthony P Reszka, Julian Huppert, Sylvain Ladame, Sarah Rankin, Ashok R Venkitaraman, Stephen Neidle, Shankar Balasubramanian. Biochemistry 2006
306
6

Design of a G-quadruplex topology through glycosidic bond angles.
Mateus Webba da Silva, Marko Trajkovski, Yuta Sannohe, Nason Ma'ani Hessari, Hiroshi Sugiyama, Janez Plavec. Angew Chem Int Ed Engl 2009
50
12

Following G-quartet formation by UV-spectroscopy.
J L Mergny, A T Phan, L Lacroix. FEBS Lett 1998
544
6

Selective and Cooperative Ligand Binding to Antiparallel Human Telomeric DNA G-Quadruplexes.
Adrien Marchand, Dominika Strzelecka, Valerie Gabelica. Chemistry 2016
21
28

5'-UTR RNA G-quadruplexes: translation regulation and targeting.
Anthony Bugaut, Shankar Balasubramanian. Nucleic Acids Res 2012
425
6

The G-quadruplex-interactive molecule BRACO-19 inhibits tumor growth, consistent with telomere targeting and interference with telomerase function.
Angelika M Burger, Fangping Dai, Christoph M Schultes, Anthony P Reszka, Michael J Moore, John A Double, Stephen Neidle. Cancer Res 2005
397
6

Molecular Recognition of the Hybrid-2 Human Telomeric G-Quadruplex by Epiberberine: Insights into Conversion of Telomeric G-Quadruplex Structures.
Clement Lin, Guanhui Wu, Kaibo Wang, Buket Onel, Saburo Sakai, Yong Shao, Danzhou Yang. Angew Chem Int Ed Engl 2018
43
13

Telomeric G-quadruplexes are a substrate and site of localization for human telomerase.
Aaron L Moye, Karina C Porter, Scott B Cohen, Tram Phan, Katherine G Zyner, Natsuki Sasaki, George O Lovrecz, Jennifer L Beck, Tracy M Bryan. Nat Commun 2015
147
6

Small-molecule-induced DNA damage identifies alternative DNA structures in human genes.
Raphaël Rodriguez, Kyle M Miller, Josep V Forment, Charles R Bradshaw, Mehran Nikan, Sébastien Britton, Tobias Oelschlaegel, Blerta Xhemalce, Shankar Balasubramanian, Stephen P Jackson. Nat Chem Biol 2012
438
6

G-quadruplexes: Emerging roles in neurodegenerative diseases and the non-coding transcriptome.
Roberto Simone, Pietro Fratta, Stephen Neidle, Gary N Parkinson, Adrian M Isaacs. FEBS Lett 2015
136
6

Structural basis of DNA quadruplex recognition by an acridine drug.
Nancy H Campbell, Gary N Parkinson, Anthony P Reszka, Stephen Neidle. J Am Chem Soc 2008
233
6

The application of DNA and RNA G-quadruplexes to therapeutic medicines.
Gavin W Collie, Gary N Parkinson. Chem Soc Rev 2011
395
6


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.