A citation-based method for searching scientific literature


List of co-cited articles
69 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity



Density functionals with broad applicability in chemistry.
Yan Zhao, Donald G Truhlar. Acc Chem Res 2008
16



Exploring the Multidimensional Free Energy Surface of Phosphoester Hydrolysis with Constrained QM/MM Dynamics.
Wenjin Li, Till Rudack, Klaus Gerwert, Frauke Gräter, Jürgen Schlitter. J Chem Theory Comput 2012
17
16

The pentacovalent phosphorus intermediate of a phosphoryl transfer reaction.
Sushmita D Lahiri, Guofeng Zhang, Debra Dunaway-Mariano, Karen N Allen. Science 2003
240
16


Hydrolysis of cyclic phosphates by ribonuclease A: a computational study using a simplified ab initio quantum model.
Brian D Wladkowski, Paul Ostazeski, Sarah Chenoweth, Steven J Broadwater, Morris Krauss. J Comput Chem 2003
4
25



Addressing open questions about phosphate hydrolysis pathways by careful free energy mapping.
B Ram Prasad, Nikolay V Plotnikov, Arieh Warshel. J Phys Chem B 2013
39
16





Why have mutagenesis studies not located the general base in ras p21.
T Schweins, R Langen, A Warshel. Nat Struct Biol 1994
107
16





Engineering ribonuclease A: production, purification and characterization of wild-type enzyme and mutants at Gln11.
S B delCardayré, M Ribó, E M Yokel, D J Quirk, W J Rutter, R T Raines. Protein Eng 1995
135
16


The rates of hydrolysis of esters of cyclic phosphinic acids.
E A Dennis, F H Westheimer. J Am Chem Soc 1966
17
16

Catalysis by the nucleolytic ribozymes.
David M J Lilley. Biochem Soc Trans 2011
29
16





Quantifying the mechanism of phosphate monoester hydrolysis in aqueous solution by evaluating the relevant ab initio QM/MM free-energy surfaces.
Nikolay V Plotnikov, B Ram Prasad, Suman Chakrabarty, Zhen T Chu, Arieh Warshel. J Phys Chem B 2013
32
16


Hybrid approach for free energy calculations with high-level methods: application to the SN2 reaction of CHCl3 and OH- in water.
Marat Valiev, Bruce C Garrett, Ming-Kang Tsai, Karol Kowalski, Shawn M Kathmann, Gregory K Schenter, Michel Dupuis. J Chem Phys 2007
49
16

Mechanism of triphosphate hydrolysis in aqueous solution: QM/MM simulations in water clusters.
Bella L Grigorenko, Alexander V Rogov, Alexander V Nemukhin. J Phys Chem B 2006
41
16

The catalytic diversity of RNAs.
Martha J Fedor, James R Williamson. Nat Rev Mol Cell Biol 2005
214
16



The structures of RNase A complexed with 3'-CMP and d(CpA): active site conformation and conserved water molecules.
I Zegers, D Maes, M H Dao-Thi, F Poortmans, R Palmer, L Wyns. Protein Sci 1994
161
16

Ribonuclease a: revealing structure-function relationships with semisynthesis.
J M Messmore, D N Fuchs, R T Raines. J Am Chem Soc 1995
89
16

Kinetics and mechanism in RNA cleavage.
R Breslow. Proc Natl Acad Sci U S A 1993
19
16

Site-directed mutagenesis of bovine pancreatic ribonuclease: lysine-41 and aspartate-121.
K Trautwein, P Holliger, J Stackhouse, S A Benner. FEBS Lett 1991
42
16

A genomewide search for ribozymes reveals an HDV-like sequence in the human CPEB3 gene.
Kourosh Salehi-Ashtiani, Andrej Lupták, Alexander Litovchick, Jack W Szostak. Science 2006
194
16

Phosphorylation reaction in cAPK protein kinase-free energy quantum mechanical/molecular mechanics simulations.
Marat Valiev, Jie Yang, Joseph A Adams, Susan S Taylor, John H Weare. J Phys Chem B 2007
80
16

On the mechanism of guanosine triphosphate hydrolysis in ras p21 proteins.
R Langen, T Schweins, A Warshel. Biochemistry 1992
95
16


Mechanisms of phosphoryl and acyl transfer.
W W Cleland, A C Hengge. FASEB J 1995
88
16

X-ray structure of a ribonuclease A-uridine vanadate complex at 1.3 A resolution.
J E Ladner, B D Wladkowski, L A Svensson, L Sjölin, G L Gilliland. Acta Crystallogr D Biol Crystallogr 1997
41
16

Water as a hydrogen bonding bridge between a phenol and imidazole. A simple model for water binding in enzymes.
Josefin E Utas, Mikael Kritikos, Dick Sandström, Björn Akermark. Biochim Biophys Acta 2006
3
33



The catalytic mechanisms of binuclear metallohydrolases.
Natasa Mitić, Sarah J Smith, Ademir Neves, Luke W Guddat, Lawrence R Gahan, Gerhard Schenk. Chem Rev 2006
246
16



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.