A citation-based method for searching scientific literature

Gregory M Williams, Vasileios Paschalis, Janice Ortega, Frederick W Muskett, James T Hodgkinson, Guo-Min Li, John W R Schwabe, Robert S Lahue. Proc Natl Acad Sci U S A 2020
Times Cited: 9







List of co-cited articles
132 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Isolated short CTG/CAG DNA slip-outs are repaired efficiently by hMutSbeta, but clustered slip-outs are poorly repaired.
Gagan B Panigrahi, Meghan M Slean, Jodie P Simard, Opher Gileadi, Christopher E Pearson. Proc Natl Acad Sci U S A 2010
66
22

Repeat instability: mechanisms of dynamic mutations.
Christopher E Pearson, Kerrie Nichol Edamura, John D Cleary. Nat Rev Genet 2005
621
22

Human mismatch repair protein hMutLα is required to repair short slipped-DNAs of trinucleotide repeats.
Gagan B Panigrahi, Meghan M Slean, Jodie P Simard, Christopher E Pearson. J Biol Chem 2012
24
22

Selectable system for monitoring the instability of CTG/CAG triplet repeats in mammalian cells.
Vera Gorbunova, Andrei Seluanov, Vincent Dion, Zoltan Sandor, James L Meservy, John H Wilson. Mol Cell Biol 2003
30
22

GFP Reporters to Monitor Instability and Expression of Expanded CAG/CTG Repeats.
Cinzia Cinesi, Bin Yang, Vincent Dion. Methods Mol Biol 2020
2
100

A polymorphism in the MSH3 mismatch repair gene is associated with the levels of somatic instability of the expanded CTG repeat in the blood DNA of myotonic dystrophy type 1 patients.
Fernando Morales, Melissa Vásquez, Carolina Santamaría, Patricia Cuenca, Eyleen Corrales, Darren G Monckton. DNA Repair (Amst) 2016
53
22

Unravelling the myotonic dystrophy type 1 clinical spectrum: A systematic registry-based study with implications for disease classification.
M De Antonio, C Dogan, D Hamroun, M Mati, S Zerrouki, B Eymard, S Katsahian, G Bassez. Rev Neurol (Paris) 2016
112
22

Bidirectional transcription stimulates expansion and contraction of expanded (CTG)*(CAG) repeats.
Masayuki Nakamori, Christopher E Pearson, Charles A Thornton. Hum Mol Genet 2011
67
22

Somatic expansion behaviour of the (CTG)n repeat in myotonic dystrophy knock-in mice is differentially affected by Msh3 and Msh6 mismatch-repair proteins.
Walther J A A van den Broek, Marcel R Nelen, Derick G Wansink, Marga M Coerwinkel, Hein te Riele, Patricia J T A Groenen, Bé Wieringa. Hum Mol Genet 2002
211
22

Unstable DNA sequence in myotonic dystrophy.
H G Harley, S A Rundle, W Reardon, J Myring, S Crow, J D Brook, P S Harper, D J Shaw. Lancet 1992
183
22

Cloning of the essential myotonic dystrophy region and mapping of the putative defect.
C Aslanidis, G Jansen, C Amemiya, G Shutler, M Mahadevan, C Tsilfidis, C Chen, J Alleman, N G Wormskamp, M Vooijs. Nature 1992
459
22


A modifier of Huntington's disease onset at the MLH1 locus.
Jong-Min Lee, Michael J Chao, Denise Harold, Kawther Abu Elneel, Tammy Gillis, Peter Holmans, Lesley Jones, Michael Orth, Richard H Myers, Seung Kwak,[...]. Hum Mol Genet 2017
53
22

CTG repeat instability and size variation timing in DNA repair-deficient mice.
Cédric Savouret, Edith Brisson, Jeroen Essers, Roland Kanaar, Albert Pastink, Hein te Riele, Claudine Junien, Geneviève Gourdon. EMBO J 2003
149
22

GFP-based fluorescence assay for CAG repeat instability in cultured human cells.
Beatriz A Santillan, Christopher Moye, David Mittelman, John H Wilson. PLoS One 2014
14
22

Somatic instability of the myotonic dystrophy (CTG)n repeat during human fetal development.
L Martorell, K Johnson, C A Boucher, M Baiget. Hum Mol Genet 1997
58
22

Somatic heterogeneity of the CTG repeat in myotonic dystrophy is age and size dependent.
L J Wong, T Ashizawa, D G Monckton, C T Caskey, C S Richards. Am J Hum Genet 1995
172
22

CpG Methylation, a Parent-of-Origin Effect for Maternal-Biased Transmission of Congenital Myotonic Dystrophy.
Lise Barbé, Stella Lanni, Arturo López-Castel, Silvie Franck, Claudia Spits, Kathelijn Keymolen, Sara Seneca, Stephanie Tomé, Ioana Miron, Julie Letourneau,[...]. Am J Hum Genet 2017
46
22

Transgenic mice carrying large human genomic sequences with expanded CTG repeat mimic closely the DM CTG repeat intergenerational and somatic instability.
H Seznec, A S Lia-Baldini, C Duros, C Fouquet, C Lacroix, H Hofmann-Radvanyi, C Junien, G Gourdon. Hum Mol Genet 2000
127
22

Myotonic dystrophy mutation: an unstable CTG repeat in the 3' untranslated region of the gene.
M Mahadevan, C Tsilfidis, L Sabourin, G Shutler, C Amemiya, G Jansen, C Neville, M Narang, J Barceló, K O'Hoy. Science 1992
22



Transcription promotes contraction of CAG repeat tracts in human cells.
Yunfu Lin, Vincent Dion, John H Wilson. Nat Struct Mol Biol 2006
122
22

Intriguing association between disease associated unstable trinucleotide repeat and CpG island.
G Gourdon, P Dessen, A S Lia, C Junien, H Hofmann-Radvanyi. Ann Genet 1997
19
22

Antisense transcription and heterochromatin at the DM1 CTG repeats are constrained by CTCF.
Diane H Cho, Cortlandt P Thienes, Sarah E Mahoney, Erwin Analau, Galina N Filippova, Stephen J Tapscott. Mol Cell 2005
214
22

CTCF-binding sites flank CTG/CAG repeats and form a methylation-sensitive insulator at the DM1 locus.
G N Filippova, C P Thienes, B H Penn, D H Cho, Y J Hu, J M Moore, T R Klesert, V V Lobanenkov, S J Tapscott. Nat Genet 2001
244
22

Transcriptionally Repressive Chromatin Remodelling and CpG Methylation in the Presence of Expanded CTG-Repeats at the DM1 Locus.
Judith Rixt Brouwer, Aline Huguet, Annie Nicole, Arnold Munnich, Geneviève Gourdon. J Nucleic Acids 2013
36
22

HDAC3-selective inhibitor enhances extinction of cocaine-seeking behavior in a persistent manner.
Melissa Malvaez, Susan C McQuown, George A Rogge, Mariam Astarabadi, Vincent Jacques, Samantha Carreiro, James R Rusche, Marcelo A Wood. Proc Natl Acad Sci U S A 2013
262
22

DNA triplet repeats mediate heterochromatin-protein-1-sensitive variegated gene silencing.
Alexander Saveliev, Christopher Everett, Tammy Sharpe, Zoë Webster, Richard Festenstein. Nature 2003
196
22


Histone deacetylases and their inhibitors in cancer, neurological diseases and immune disorders.
Katrina J Falkenberg, Ricky W Johnstone. Nat Rev Drug Discov 2014
978
22

Therapeutic potential of selective histone deacetylase 3 inhibition.
Lihui Zhang, Yiming Chen, Qixiao Jiang, Weiguo Song, Lei Zhang. Eur J Med Chem 2019
20
22

Genomic targets, and histone acetylation and gene expression profiling of neural HDAC inhibition.
Jose P Lopez-Atalaya, Satomi Ito, Luis M Valor, Eva Benito, Angel Barco. Nucleic Acids Res 2013
70
11


edgeR: a Bioconductor package for differential expression analysis of digital gene expression data.
Mark D Robinson, Davis J McCarthy, Gordon K Smyth. Bioinformatics 2010
11

Histone deacetylases 1 and 2 redundantly regulate cardiac morphogenesis, growth, and contractility.
Rusty L Montgomery, Christopher A Davis, Matthew J Potthoff, Michael Haberland, Jens Fielitz, Xiaoxia Qi, Joseph A Hill, James A Richardson, Eric N Olson. Genes Dev 2007
509
11

HDAC2 negatively regulates memory formation and synaptic plasticity.
Ji-Song Guan, Stephen J Haggarty, Emanuela Giacometti, Jan-Hermen Dannenberg, Nadine Joseph, Jun Gao, Thomas J F Nieland, Ying Zhou, Xinyu Wang, Ralph Mazitschek,[...]. Nature 2009
11

The Effects of Pharmacological Inhibition of Histone Deacetylase 3 (HDAC3) in Huntington's Disease Mice.
Haiqun Jia, Ying Wang, Charles D Morris, Vincent Jacques, Joel M Gottesfeld, James R Rusche, Elizabeth A Thomas. PLoS One 2016
50
11

Human HDAC1 and HDAC2 function in the DNA-damage response to promote DNA nonhomologous end-joining.
Kyle M Miller, Jorrit V Tjeertes, Julia Coates, Gaëlle Legube, Sophie E Polo, Sébastien Britton, Stephen P Jackson. Nat Struct Mol Biol 2010
437
11

Genomic context drives SCA7 CAG repeat instability, while expressed SCA7 cDNAs are intergenerationally and somatically stable in transgenic mice.
Randell T Libby, Darren G Monckton, Ying-Hui Fu, Refugio A Martinez, John P McAbney, R Lau, David D Einum, K Nichol, Carol B Ware, Louis J Ptacek,[...]. Hum Mol Genet 2003
55
11

Neuroprotective effects of phenylbutyrate in the N171-82Q transgenic mouse model of Huntington's disease.
Gabriella Gardian, Susan E Browne, Dong-Kug Choi, Peter Klivenyi, Jason Gregorio, James K Kubilus, Hoon Ryu, Brett Langley, Rajiv R Ratan, Robert J Ferrante,[...]. J Biol Chem 2005
336
11

The sva package for removing batch effects and other unwanted variation in high-throughput experiments.
Jeffrey T Leek, W Evan Johnson, Hilary S Parker, Andrew E Jaffe, John D Storey. Bioinformatics 2012
11


Genetic knock-down of HDAC7 does not ameliorate disease pathogenesis in the R6/2 mouse model of Huntington's disease.
Caroline L Benn, Rachel Butler, Lydia Mariner, Jude Nixon, Hilary Moffitt, Michal Mielcarek, Ben Woodman, Gillian P Bates. PLoS One 2009
55
11

Hdac3 is essential for the maintenance of chromatin structure and genome stability.
Srividya Bhaskara, Sarah K Knutson, Guochun Jiang, Mahesh B Chandrasekharan, Andrew J Wilson, Siyuan Zheng, Ashwini Yenamandra, Kimberly Locke, Jia-Ling Yuan, Alyssa R Bonine-Summers,[...]. Cancer Cell 2010
251
11

RSeQC: quality control of RNA-seq experiments.
Liguo Wang, Shengqin Wang, Wei Li. Bioinformatics 2012
11


The HDAC inhibitor 4b ameliorates the disease phenotype and transcriptional abnormalities in Huntington's disease transgenic mice.
Elizabeth A Thomas, Giovanni Coppola, Paula A Desplats, Bin Tang, Elisabetta Soragni, Ryan Burnett, Fuying Gao, Kelsey M Fitzgerald, Jenna F Borok, David Herman,[...]. Proc Natl Acad Sci U S A 2008
211
11

Distribution of histone deacetylases 1-11 in the rat brain.
Ron S Broide, Jeff M Redwine, Najla Aftahi, Warren Young, Floyd E Bloom, Christopher J Winrow. J Mol Neurosci 2007
247
11



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.