A citation-based method for searching scientific literature

Cameron S Cowan, Magdalena Renner, Martina De Gennaro, Brigitte Gross-Scherf, David Goldblum, Yanyan Hou, Martin Munz, Tiago M Rodrigues, Jacek Krol, Tamas Szikra, Rachel Cuttat, Annick Waldt, Panagiotis Papasaikas, Roland Diggelmann, Claudia P Patino-Alvarez, Patricia Galliker, Stefan E Spirig, Dinko Pavlinic, Nadine Gerber-Hollbach, Sven Schuierer, Aldin Srdanovic, Marton Balogh, Riccardo Panero, Akos Kusnyerik, Arnold Szabo, Michael B Stadler, Selim Orgül, Simone Picelli, Pascal W Hasler, Andreas Hierlemann, Hendrik P N Scholl, Guglielmo Roma, Florian Nigsch, Botond Roska. Cell 2020
Times Cited: 116







List of co-cited articles
1345 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


cGMP production of patient-specific iPSCs and photoreceptor precursor cells to treat retinal degenerative blindness.
Luke A Wiley, Erin R Burnight, Adam P DeLuca, Kristin R Anfinson, Cathryn M Cranston, Emily E Kaalberg, Jessica A Penticoff, Louisa M Affatigato, Robert F Mullins, Edwin M Stone,[...]. Sci Rep 2016
69
8

Photoreceptor precursors derived from three-dimensional embryonic stem cell cultures integrate and mature within adult degenerate retina.
Anai Gonzalez-Cordero, Emma L West, Rachael A Pearson, Yanai Duran, Livia S Carvalho, Colin J Chu, Arifa Naeem, Samuel J I Blackford, Anastasios Georgiadis, Jorn Lakowski,[...]. Nat Biotechnol 2013
245
6

Single-Cell RNA Sequencing in Human Retinal Degeneration Reveals Distinct Glial Cell Populations.
Andrew P Voigt, Elaine Binkley, Miles J Flamme-Wiese, Shemin Zeng, Adam P DeLuca, Todd E Scheetz, Budd A Tucker, Robert F Mullins, Edwin M Stone. Cells 2020
17
35

Structural and Functional Characterization of Human Stem-Cell-Derived Retinal Organoids by Live Imaging.
Andrew W Browne, Cosimo Arnesano, Narine Harutyunyan, Thien Khuu, Juan Carlos Martinez, Harvey A Pollack, David S Koos, Thomas C Lee, Scott E Fraser, Rex A Moats,[...]. Invest Ophthalmol Vis Sci 2017
37
16

Generation of retinal cells from mouse and human induced pluripotent stem cells.
Yasuhiko Hirami, Fumitaka Osakada, Kazutoshi Takahashi, Keisuke Okita, Shinya Yamanaka, Hanako Ikeda, Nagahisa Yoshimura, Masayo Takahashi. Neurosci Lett 2009
282
6

The dynamics and regulators of cell fate decisions are revealed by pseudotemporal ordering of single cells.
Cole Trapnell, Davide Cacchiarelli, Jonna Grimsby, Prapti Pokharel, Shuqiang Li, Michael Morse, Niall J Lennon, Kenneth J Livak, Tarjei S Mikkelsen, John L Rinn. Nat Biotechnol 2014
6

Individual brain organoids reproducibly form cell diversity of the human cerebral cortex.
Silvia Velasco, Amanda J Kedaigle, Sean K Simmons, Allison Nash, Marina Rocha, Giorgia Quadrato, Bruna Paulsen, Lan Nguyen, Xian Adiconis, Aviv Regev,[...]. Nature 2019
317
6

Isolation and Comparative Transcriptome Analysis of Human Fetal and iPSC-Derived Cone Photoreceptor Cells.
Emily Welby, Jorn Lakowski, Valentina Di Foggia, Dimitri Budinger, Anai Gonzalez-Cordero, Aaron T L Lun, Michael Epstein, Aara Patel, Elisa Cuevas, Kamil Kruczek,[...]. Stem Cell Reports 2017
57
10

iPSC-Derived Retina Transplants Improve Vision in rd1 End-Stage Retinal-Degeneration Mice.
Michiko Mandai, Momo Fujii, Tomoyo Hashiguchi, Genshiro A Sunagawa, Shin-ichiro Ito, Jianan Sun, Jun Kaneko, Junki Sho, Chikako Yamada, Masayo Takahashi. Stem Cell Reports 2017
81
7

Mouse Retinal Cell Atlas: Molecular Identification of over Sixty Amacrine Cell Types.
Wenjun Yan, Mallory A Laboulaye, Nicholas M Tran, Irene E Whitney, Inbal Benhar, Joshua R Sanes. J Neurosci 2020
62
9

Engineering of human brain organoids with a functional vascular-like system.
Bilal Cakir, Yangfei Xiang, Yoshiaki Tanaka, Mehmet H Kural, Maxime Parent, Young-Jin Kang, Kayley Chapeton, Benjamin Patterson, Yifan Yuan, Chang-Shun He,[...]. Nat Methods 2019
261
6

Specification of positional identity in forebrain organoids.
Gustav Y Cederquist, James J Asciolla, Jason Tchieu, Ryan M Walsh, Daniela Cornacchia, Marilyn D Resh, Lorenz Studer. Nat Biotechnol 2019
120
6

In Vitro Modeling Using Ciliopathy-Patient-Derived Cells Reveals Distinct Cilia Dysfunctions Caused by CEP290 Mutations.
Hiroko Shimada, Quanlong Lu, Christine Insinna-Kettenhofen, Kunio Nagashima, Milton A English, Elizabeth M Semler, Jacklyn Mahgerefteh, Artur V Cideciyan, Tiansen Li, Brian P Brooks,[...]. Cell Rep 2017
73
8

Topography of ganglion cells in human retina.
C A Curcio, K A Allen. J Comp Neurol 1990
6

Cellular and Circuit Mechanisms Shaping the Perceptual Properties of the Primate Fovea.
Raunak Sinha, Mrinalini Hoon, Jacob Baudin, Haruhisa Okawa, Rachel O L Wong, Fred Rieke. Cell 2017
77
7


Pharmacologic fibroblast reprogramming into photoreceptors restores vision.
Biraj Mahato, Koray Dogan Kaya, Yan Fan, Nathalie Sumien, Ritu A Shetty, Wei Zhang, Delaney Davis, Thomas Mock, Subrata Batabyal, Aiguo Ni,[...]. Nature 2020
37
16

Stem cell-based retina models.
Kevin Achberger, Jasmin C Haderspeck, Alexander Kleger, Stefan Liebau. Adv Drug Deliv Rev 2019
33
18

Characterization of Three-Dimensional Retinal Tissue Derived from Human Embryonic Stem Cells in Adherent Monolayer Cultures.
Ratnesh K Singh, Ramya K Mallela, Pamela K Cornuet, Aaron N Reifler, Andrew P Chervenak, Michael D West, Kwoon Y Wong, Igor O Nasonkin. Stem Cells Dev 2015
35
17

Generation of cerebral organoids from human pluripotent stem cells.
Madeline A Lancaster, Juergen A Knoblich. Nat Protoc 2014
624
6

Assembly of functionally integrated human forebrain spheroids.
Fikri Birey, Jimena Andersen, Christopher D Makinson, Saiful Islam, Wu Wei, Nina Huber, H Christina Fan, Kimberly R Cordes Metzler, Georgia Panagiotakos, Nicholas Thom,[...]. Nature 2017
527
6

Cell diversity and network dynamics in photosensitive human brain organoids.
Giorgia Quadrato, Tuan Nguyen, Evan Z Macosko, John L Sherwood, Sung Min Yang, Daniel R Berger, Natalie Maria, Jorg Scholvin, Melissa Goldman, Justin P Kinney,[...]. Nature 2017
543
6

Disrupted alternative splicing for genes implicated in splicing and ciliogenesis causes PRPF31 retinitis pigmentosa.
Adriana Buskin, Lili Zhu, Valeria Chichagova, Basudha Basu, Sina Mozaffari-Jovin, David Dolan, Alastair Droop, Joseph Collin, Revital Bronstein, Sudeep Mehrotra,[...]. Nat Commun 2018
85
7

Transplantation of Human Embryonic Stem Cell-Derived Retinal Tissue in the Subretinal Space of the Cat Eye.
Ratnesh K Singh, Laurence M Occelli, Francois Binette, Simon M Petersen-Jones, Igor O Nasonkin. Stem Cells Dev 2019
24
25

Three-dimensional automated reporter quantification (3D-ARQ) technology enables quantitative screening in retinal organoids.
M Natalia Vergara, Miguel Flores-Bellver, Silvia Aparicio-Domingo, Minda McNally, Karl J Wahlin, Meera T Saxena, Jeff S Mumm, M Valeria Canto-Soler. Development 2017
40
15

Stepwise Differentiation of Retinal Ganglion Cells from Human Pluripotent Stem Cells Enables Analysis of Glaucomatous Neurodegeneration.
Sarah K Ohlemacher, Akshayalakshmi Sridhar, Yucheng Xiao, Alexandra E Hochstetler, Mansoor Sarfarazi, Theodore R Cummins, Jason S Meyer. Stem Cells 2016
76
7

Transcriptional regulation of photoreceptor development and homeostasis in the mammalian retina.
Anand Swaroop, Douglas Kim, Douglas Forrest. Nat Rev Neurosci 2010
344
6

Retinal Organoids derived from hiPSCs of an AIPL1-LCA Patient Maintain Cytoarchitecture despite Reduced levels of Mutant AIPL1.
Dunja Lukovic, Ana Artero Castro, Koray Dogan Kaya, Daniella Munezero, Linn Gieser, Carlota Davó-Martínez, Marta Corton, Nicolás Cuenca, Anand Swaroop, Visvanathan Ramamurthy,[...]. Sci Rep 2020
17
35

Human iPSC-Derived Retinas Recapitulate the Fetal CRB1 CRB2 Complex Formation and Demonstrate that Photoreceptors and Müller Glia Are Targets of AAV5.
Peter M Quinn, Thilo M Buck, Aat A Mulder, Charlotte Ohonin, C Henrique Alves, Rogier M Vos, Monika Bialecka, Tessa van Herwaarden, Elon H C van Dijk, Mays Talib,[...]. Stem Cell Reports 2019
38
15

A simple and efficient method for generating human retinal organoids.
Florian Regent, Holly Y Chen, Ryan A Kelley, Zepeng Qu, Anand Swaroop, Tiansen Li. Mol Vis 2020
17
35

Accelerated and Improved Differentiation of Retinal Organoids from Pluripotent Stem Cells in Rotating-Wall Vessel Bioreactors.
Tyler DiStefano, Holly Yu Chen, Christopher Panebianco, Koray Dogan Kaya, Matthew J Brooks, Linn Gieser, Nicole Y Morgan, Tom Pohida, Anand Swaroop. Stem Cell Reports 2018
91
6

Retinal cells integrate into the outer nuclear layer and differentiate into mature photoreceptors after subretinal transplantation into adult mice.
Udo Bartsch, Wasi Oriyakhel, Paul F Kenna, Stephan Linke, Gisbert Richard, Bettina Petrowitz, Pete Humphries, G Jane Farrar, Marius Ader. Exp Eye Res 2008
118
6

Transplantation of embryonic and induced pluripotent stem cell-derived 3D retinal sheets into retinal degenerative mice.
Juthaporn Assawachananont, Michiko Mandai, Satoshi Okamoto, Chikako Yamada, Mototsugu Eiraku, Shigenobu Yonemura, Yoshiki Sasai, Masayo Takahashi. Stem Cell Reports 2014
191
6

Comprehensive analysis of gene expression in human retina and supporting tissues.
Mingyao Li, Cheng Jia, Krista L Kazmierkiewicz, Anita S Bowman, Lifeng Tian, Yichuan Liu, Neel A Gupta, Harini V Gudiseva, Stephanie S Yee, Mijin Kim,[...]. Hum Mol Genet 2014
84
5

DYNC2H1 hypomorphic or retina-predominant variants cause nonsyndromic retinal degeneration.
Anjali Vig, James A Poulter, Daniele Ottaviani, Erika Tavares, Katerina Toropova, Anna Maria Tracewska, Antonio Mollica, Jasmine Kang, Oshini Kehelwathugoda, Tara Paton,[...]. Genet Med 2020
18
27

Reprogramming of Adult Retinal Müller Glial Cells into Human-Induced Pluripotent Stem Cells as an Efficient Source of Retinal Cells.
Amélie Slembrouck-Brec, Amélie Rodrigues, Oriane Rabesandratana, Giuliana Gagliardi, Céline Nanteau, Stéphane Fouquet, Gilles Thuret, Sacha Reichman, Gael Orieux, Olivier Goureau. Stem Cells Int 2019
13
38

Detailed Phenotyping and Therapeutic Strategies for Intronic ABCA4 Variants in Stargardt Disease.
Mubeen Khan, Gavin Arno, Ana Fakin, David A Parfitt, Patty P A Dhooge, Silvia Albert, Nathalie M Bax, Lonneke Duijkers, Michael Niblock, Kwan L Hau,[...]. Mol Ther Nucleic Acids 2020
18
27

Single-cell RNA counting at allele and isoform resolution using Smart-seq3.
Michael Hagemann-Jensen, Christoph Ziegenhain, Ping Chen, Daniel Ramsköld, Gert-Jan Hendriks, Anton J M Larsson, Omid R Faridani, Rickard Sandberg. Nat Biotechnol 2020
125
5

Embryonic stem cell lines derived from human blastocysts.
J A Thomson, J Itskovitz-Eldor, S S Shapiro, M A Waknitz, J J Swiergiel, V S Marshall, J M Jones. Science 1998
5

A Novel Approach to Single Cell RNA-Sequence Analysis Facilitates In Silico Gene Reporting of Human Pluripotent Stem Cell-Derived Retinal Cell Types.
M Joseph Phillips, Peng Jiang, Sara Howden, Patrick Barney, Jee Min, Nathaniel W York, Li-Fang Chu, Elizabeth E Capowski, Abigail Cash, Shivani Jain,[...]. Stem Cells 2018
33
15

Stemming retinal regeneration with pluripotent stem cells.
Zi-Bing Jin, Mei-Ling Gao, Wen-Li Deng, Kun-Chao Wu, Sunao Sugita, Michiko Mandai, Masayo Takahashi. Prog Retin Eye Res 2019
73
6

Mitochondrial dysfunction as a cause of optic neuropathies.
Valerio Carelli, Fred N Ross-Cisneros, Alfredo A Sadun. Prog Retin Eye Res 2004
541
5

Mitochondrial optic neuropathies - disease mechanisms and therapeutic strategies.
Patrick Yu-Wai-Man, Philip G Griffiths, Patrick F Chinnery. Prog Retin Eye Res 2011
367
5

Progress and potential in organoid research.
Giuliana Rossi, Andrea Manfrin, Matthias P Lutolf. Nat Rev Genet 2018
307
5

Targeting neuronal and glial cell types with synthetic promoter AAVs in mice, non-human primates and humans.
Josephine Jüttner, Arnold Szabo, Brigitte Gross-Scherf, Rei K Morikawa, Santiago B Rompani, Peter Hantz, Tamas Szikra, Federico Esposti, Cameron S Cowan, Arjun Bharioke,[...]. Nat Neurosci 2019
75
6

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2.
Michael I Love, Wolfgang Huber, Simon Anders. Genome Biol 2014
5

Massively parallel digital transcriptional profiling of single cells.
Grace X Y Zheng, Jessica M Terry, Phillip Belgrader, Paul Ryvkin, Zachary W Bent, Ryan Wilson, Solongo B Ziraldo, Tobias D Wheeler, Geoff P McDermott, Junjie Zhu,[...]. Nat Commun 2017
5

Cell fate determination in the vertebrate retina.
C L Cepko, C P Austin, X Yang, M Alexiades, D Ezzeddine. Proc Natl Acad Sci U S A 1996
768
5

Parallel processing in the mammalian retina.
Heinz Wässle. Nat Rev Neurosci 2004
687
5

Retinal bipolar cells: elementary building blocks of vision.
Thomas Euler, Silke Haverkamp, Timm Schubert, Tom Baden. Nat Rev Neurosci 2014
207
5


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.