A citation-based method for searching scientific literature

Sarah S Gabriel, Carlson Tsui, David Chisanga, Flora Weber, Manuela Llano-León, Patrick M Gubser, Laurent Bartholin, Fernando Souza-Fonseca-Guimaraes, Nicholas D Huntington, Wei Shi, Daniel T Utzschneider, Axel Kallies. Immunity 2021
Times Cited: 18







List of co-cited articles
158 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Potentiating the antitumour response of CD8(+) T cells by modulating cholesterol metabolism.
Wei Yang, Yibing Bai, Ying Xiong, Jin Zhang, Shuokai Chen, Xiaojun Zheng, Xiangbo Meng, Lunyi Li, Jing Wang, Chenguang Xu,[...]. Nature 2016
407
11

Navigating metabolic pathways to enhance antitumour immunity and immunotherapy.
Xiaoyun Li, Mathias Wenes, Pedro Romero, Stanley Ching-Cheng Huang, Sarah-Maria Fendt, Ping-Chih Ho. Nat Rev Clin Oncol 2019
236
11

Phosphoenolpyruvate Is a Metabolic Checkpoint of Anti-tumor T Cell Responses.
Ping-Chih Ho, Jessica Dauz Bihuniak, Andrew N Macintyre, Matthew Staron, Xiaojing Liu, Robert Amezquita, Yao-Chen Tsui, Guoliang Cui, Goran Micevic, Jose C Perales,[...]. Cell 2015
733
11

Metabolic programs define dysfunctional immune responses in severe COVID-19 patients.
Elizabeth A Thompson, Katherine Cascino, Alvaro A Ordonez, Weiqiang Zhou, Ajay Vaghasia, Anne Hamacher-Brady, Nathan R Brady, Im-Hong Sun, Rulin Wang, Avi Z Rosenberg,[...]. Cell Rep 2021
47
11

T cell exit from quiescence and differentiation into Th2 cells depend on Raptor-mTORC1-mediated metabolic reprogramming.
Kai Yang, Sharad Shrestha, Hu Zeng, Peer W F Karmaus, Geoffrey Neale, Peter Vogel, David A Guertin, Richard F Lamb, Hongbo Chi. Immunity 2013
237
11

The Bone Marrow Protects and Optimizes Immunological Memory during Dietary Restriction.
Nicholas Collins, Seong-Ji Han, Michel Enamorado, Verena M Link, Bonnie Huang, E Ashley Moseman, Rigel J Kishton, John P Shannon, Dhaval Dixit, Susan R Schwab,[...]. Cell 2019
98
11

IRE1α-XBP1 controls T cell function in ovarian cancer by regulating mitochondrial activity.
Minkyung Song, Tito A Sandoval, Chang-Suk Chae, Sahil Chopra, Chen Tan, Melanie R Rutkowski, Mahesh Raundhal, Ricardo A Chaurio, Kyle K Payne, Csaba Konrad,[...]. Nature 2018
148
11

Sterol regulatory element-binding proteins are essential for the metabolic programming of effector T cells and adaptive immunity.
Yoko Kidani, Heidi Elsaesser, M Benjamin Hock, Laurent Vergnes, Kevin J Williams, Joseph P Argus, Beth N Marbois, Evangelia Komisopoulou, Elizabeth B Wilson, Timothy F Osborne,[...]. Nat Immunol 2013
278
11

Metabolic Defects of Peripheral T Cells in COVID-19 Patients.
Xiaoju Liu, Juanjuan Zhao, Haiyan Wang, Wan Wang, Xu Su, Xuejiao Liao, Shuye Zhang, Jian Sun, Zheng Zhang. J Immunol 2021
8
25

Memory CD8(+) T Cells Require Increased Concentrations of Acetate Induced by Stress for Optimal Function.
Maria L Balmer, Eric H Ma, Glenn R Bantug, Jasmin Grählert, Simona Pfister, Timo Glatter, Annaïse Jauch, Sarah Dimeloe, Emma Slack, Philippe Dehio,[...]. Immunity 2016
179
11

Dendritic Cell Metabolism and Function in Tumors.
Paolo Giovanelli, Tito A Sandoval, Juan R Cubillos-Ruiz. Trends Immunol 2019
57
11

Dietary Fiber Confers Protection against Flu by Shaping Ly6c- Patrolling Monocyte Hematopoiesis and CD8+ T Cell Metabolism.
Aurélien Trompette, Eva S Gollwitzer, Céline Pattaroni, Isabel C Lopez-Mejia, Erika Riva, Julie Pernot, Niki Ubags, Lluis Fajas, Laurent P Nicod, Benjamin J Marsland. Immunity 2018
254
11

Distinct Regulation of Th17 and Th1 Cell Differentiation by Glutaminase-Dependent Metabolism.
Marc O Johnson, Melissa M Wolf, Matthew Z Madden, Gabriela Andrejeva, Ayaka Sugiura, Diana C Contreras, Damian Maseda, Maria V Liberti, Katelyn Paz, Rigel J Kishton,[...]. Cell 2018
245
11

Quantitative analysis of T cell proteomes and environmental sensors during T cell differentiation.
Andrew J M Howden, Jens L Hukelmann, Alejandro Brenes, Laura Spinelli, Linda V Sinclair, Angus I Lamond, Doreen A Cantrell. Nat Immunol 2019
74
11

S-2-hydroxyglutarate regulates CD8+ T-lymphocyte fate.
Petros A Tyrakis, Asis Palazon, David Macias, Kian L Lee, Anthony T Phan, Pedro Veliça, Jia You, Grace S Chia, Jingwei Sim, Andrew Doedens,[...]. Nature 2016
220
11

Cancer SLC43A2 alters T cell methionine metabolism and histone methylation.
Yingjie Bian, Wei Li, Daniel M Kremer, Peter Sajjakulnukit, Shasha Li, Joel Crespo, Zeribe C Nwosu, Li Zhang, Arkadiusz Czerwonka, Anna Pawłowska,[...]. Nature 2020
104
11

T cell stemness and dysfunction in tumors are triggered by a common mechanism.
Suman Kumar Vodnala, Robert Eil, Rigel J Kishton, Madhusudhanan Sukumar, Tori N Yamamoto, Ngoc-Han Ha, Ping-Hsien Lee, MinHwa Shin, Shashank J Patel, Zhiya Yu,[...]. Science 2019
198
11

Trimmomatic: a flexible trimmer for Illumina sequence data.
Anthony M Bolger, Marc Lohse, Bjoern Usadel. Bioinformatics 2014
11

Transforming Growth Factor-β Signaling in Immunity and Cancer.
Eduard Batlle, Joan Massagué. Immunity 2019
698
11

Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles.
Aravind Subramanian, Pablo Tamayo, Vamsi K Mootha, Sayan Mukherjee, Benjamin L Ebert, Michael A Gillette, Amanda Paulovich, Scott L Pomeroy, Todd R Golub, Eric S Lander,[...]. Proc Natl Acad Sci U S A 2005
11

Molecular signatures database (MSigDB) 3.0.
Arthur Liberzon, Aravind Subramanian, Reid Pinchback, Helga Thorvaldsdóttir, Pablo Tamayo, Jill P Mesirov. Bioinformatics 2011
11

NIH Image to ImageJ: 25 years of image analysis.
Caroline A Schneider, Wayne S Rasband, Kevin W Eliceiri. Nat Methods 2012
11

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2.
Michael I Love, Wolfgang Huber, Simon Anders. Genome Biol 2014
11

HTSeq--a Python framework to work with high-throughput sequencing data.
Simon Anders, Paul Theodor Pyl, Wolfgang Huber. Bioinformatics 2015
11

Tcf1+ cells are required to maintain the inflationary T cell pool upon MCMV infection.
Suzanne P M Welten, Alexander Yermanos, Nicolas S Baumann, Franziska Wagen, Nathalie Oetiker, Ioana Sandu, Alessandro Pedrioli, Jennifer D Oduro, Sai T Reddy, Luka Cicin-Sain,[...]. Nat Commun 2020
19
11

Hepatitis D Virus-Specific CD8+ T Cells Have a Memory-Like Phenotype Associated With Viral Immune Escape in Patients With Chronic Hepatitis D Virus Infection.
Helenie Kefalakes, Christopher Koh, John Sidney, Georgios Amanakis, Alessandro Sette, Theo Heller, Barbara Rehermann. Gastroenterology 2019
26
11

TCF1+ hepatitis C virus-specific CD8+ T cells are maintained after cessation of chronic antigen stimulation.
Dominik Wieland, Janine Kemming, Anita Schuch, Florian Emmerich, Percy Knolle, Christoph Neumann-Haefelin, Werner Held, Dietmar Zehn, Maike Hofmann, Robert Thimme. Nat Commun 2017
133
11

CXCR3 enables recruitment and site-specific bystander activation of memory CD8+ T cells.
Nicholas J Maurice, M Juliana McElrath, Erica Andersen-Nissen, Nicole Frahm, Martin Prlic. Nat Commun 2019
34
11

Conventional type I dendritic cells maintain a reservoir of proliferative tumor-antigen specific TCF-1+ CD8+ T cells in tumor-draining lymph nodes.
Jason M Schenkel, Rebecca H Herbst, David Canner, Amy Li, Michelle Hillman, Sean-Luc Shanahan, Grace Gibbons, Olivia C Smith, Jonathan Y Kim, Peter Westcott,[...]. Immunity 2021
22
11

Molecular regulation of effector and memory T cell differentiation.
John T Chang, E John Wherry, Ananda W Goldrath. Nat Immunol 2014
321
11


Genome-wide analysis of histone methylation reveals chromatin state-based regulation of gene transcription and function of memory CD8+ T cells.
Yasuto Araki, Zhibin Wang, Chongzhi Zang, William H Wood, Dustin Schones, Kairong Cui, Tae-Young Roh, Brad Lhotsky, Robert P Wersto, Weiqun Peng,[...]. Immunity 2009
203
11

Effector CD8 T cells dedifferentiate into long-lived memory cells.
Ben Youngblood, J Scott Hale, Haydn T Kissick, Eunseon Ahn, Xiaojin Xu, Andreas Wieland, Koichi Araki, Erin E West, Hazem E Ghoneim, Yiping Fan,[...]. Nature 2017
245
11

Distinct epigenetic signatures delineate transcriptional programs during virus-specific CD8(+) T cell differentiation.
Brendan E Russ, Moshe Olshanksy, Heather S Smallwood, Jasmine Li, Alice E Denton, Julia E Prier, Angus T Stock, Hayley A Croom, Jolie G Cullen, Michelle L T Nguyen,[...]. Immunity 2014
144
11

Metabolic and epigenetic regulation of T-cell exhaustion.
Fabien Franco, Alison Jaccard, Pedro Romero, Yi-Ru Yu, Ping-Chih Ho. Nat Metab 2020
56
11

Genome-wide analysis identifies NR4A1 as a key mediator of T cell dysfunction.
Xindong Liu, Yun Wang, Huiping Lu, Jing Li, Xiaowei Yan, Minglu Xiao, Jing Hao, Andrei Alekseev, Hiep Khong, Tenghui Chen,[...]. Nature 2019
155
11

Molecular and cellular insights into T cell exhaustion.
E John Wherry, Makoto Kurachi. Nat Rev Immunol 2015
11

Targeting a CAR to the TRAC locus with CRISPR/Cas9 enhances tumour rejection.
Justin Eyquem, Jorge Mansilla-Soto, Theodoros Giavridis, Sjoukje J C van der Stegen, Mohamad Hamieh, Kristen M Cunanan, Ashlesha Odak, Mithat Gönen, Michel Sadelain. Nature 2017
828
11

Canonical TGF-β Signaling Pathway Represses Human NK Cell Metabolism.
Vanessa Zaiatz-Bittencourt, David K Finlay, Clair M Gardiner. J Immunol 2018
81
11

Tumor-derived TGF-β inhibits mitochondrial respiration to suppress IFN-γ production by human CD4+ T cells.
Sarah Dimeloe, Patrick Gubser, Jordan Loeliger, Corina Frick, Leyla Develioglu, Marco Fischer, Florian Marquardsen, Glenn R Bantug, Daniela Thommen, Yannic Lecoultre,[...]. Sci Signal 2019
40
11

TGF-β activation and function in immunity.
Mark A Travis, Dean Sheppard. Annu Rev Immunol 2014
454
11

CD8+ T cell exhaustion.
Makoto Kurachi. Semin Immunopathol 2019
74
11

T cell differentiation in chronic infection and cancer: functional adaptation or exhaustion?
Daniel E Speiser, Daniel T Utzschneider, Susanne G Oberle, Christian Münz, Pedro Romero, Dietmar Zehn. Nat Rev Immunol 2014
191
11

Molecular signature of CD8+ T cell exhaustion during chronic viral infection.
E John Wherry, Sang-Jun Ha, Susan M Kaech, W Nicholas Haining, Surojit Sarkar, Vandana Kalia, Shruti Subramaniam, Joseph N Blattman, Daniel L Barber, Rafi Ahmed. Immunity 2007
11

A role for the transcriptional repressor Blimp-1 in CD8(+) T cell exhaustion during chronic viral infection.
Haina Shin, Shawn D Blackburn, Andrew M Intlekofer, Charlly Kao, Jill M Angelosanto, Steven L Reiner, E John Wherry. Immunity 2009
323
11

Progressive loss of memory T cell potential and commitment to exhaustion during chronic viral infection.
Jill M Angelosanto, Shawn D Blackburn, Alison Crawford, E John Wherry. J Virol 2012
164
11

Transcription factor T-bet represses expression of the inhibitory receptor PD-1 and sustains virus-specific CD8+ T cell responses during chronic infection.
Charlly Kao, Kenneth J Oestreich, Michael A Paley, Alison Crawford, Jill M Angelosanto, Mohammed-Alkhatim A Ali, Andrew M Intlekofer, Jeremy M Boss, Steven L Reiner, Amy S Weinmann,[...]. Nat Immunol 2011
327
11


A human memory T cell subset with stem cell-like properties.
Luca Gattinoni, Enrico Lugli, Yun Ji, Zoltan Pos, Chrystal M Paulos, Máire F Quigley, Jorge R Almeida, Emma Gostick, Zhiya Yu, Carmine Carpenito,[...]. Nat Med 2011
11

Origin and differentiation of human memory CD8 T cells after vaccination.
Rama S Akondy, Mark Fitch, Srilatha Edupuganti, Shu Yang, Haydn T Kissick, Kelvin W Li, Ben A Youngblood, Hossam A Abdelsamed, Donald J McGuire, Kristen W Cohen,[...]. Nature 2017
254
11


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.