A citation-based method for searching scientific literature

Maria Lisa Dentici, Sabina Barresi, Marta Nardella, Emanuele Bellacchio, Paolo Alfieri, Alessandro Bruselles, Francesca Pantaleoni, Alberto Danieli, Giancarlo Iarossi, Marco Cappa, Enrico Bertini, Marco Tartaglia, Ginevra Zanni. Gene 2017
Times Cited: 16







List of co-cited articles
169 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Arrhythmogenic right ventricular dysplasia.
Palaniappan Muthappan, Hugh Calkins. Prog Cardiovasc Dis 2008
31
6


Flexible architecture of IP3R1 by Cryo-EM.
Steven J Ludtke, Thao P Tran, Que T Ngo, Vera Yu Moiseenkova-Bell, Wah Chiu, Irina I Serysheva. Structure 2011
67
6

Characterization of a cytosolic and a luminal Ca2+ binding site in the type I inositol 1,4,5-trisphosphate receptor.
I Sienaert, H De Smedt, J B Parys, L Missiaen, S Vanlingen, H Sipma, R Casteels. J Biol Chem 1996
95
6

Calsequestrin is an inhibitor of skeletal muscle ryanodine receptor calcium release channels.
Nicole A Beard, Magdalena M Sakowska, Angela F Dulhunty, Derek R Laver. Biophys J 2002
123
6

Regulation of inositol 1,4,5-trisphosphate receptor type 1 function during oocyte maturation by MPM-2 phosphorylation.
Veerle Vanderheyden, Takuya Wakai, Geert Bultynck, Humbert De Smedt, Jan B Parys, Rafael A Fissore. Cell Calcium 2009
29
6


Ca2+-mediated activation of the skeletal-muscle ryanodine receptor ion channel.
Le Xu, Venkat R Chirasani, Jordan S Carter, Daniel A Pasek, Nikolay V Dokholyan, Naohiro Yamaguchi, Gerhard Meissner. J Biol Chem 2018
9
11

ER-luminal [Ca2+] regulation of InsP3 receptor gating mediated by an ER-luminal peripheral Ca2+-binding protein.
Horia Vais, Min Wang, Karthik Mallilankaraman, Riley Payne, Chris McKennan, Jeffrey T Lock, Lynn A Spruce, Carly Fiest, Matthew Yan-Lok Chan, Ian Parker,[...]. Elife 2020
8
12

Complex of calmodulin with a ryanodine receptor target reveals a novel, flexible binding mode.
Adina A Maximciuc, John A Putkey, Yousif Shamoo, Kevin R Mackenzie. Structure 2006
93
6

Force Triggers YAP Nuclear Entry by Regulating Transport across Nuclear Pores.
Alberto Elosegui-Artola, Ion Andreu, Amy E M Beedle, Ainhoa Lezamiz, Marina Uroz, Anita J Kosmalska, Roger Oria, Jenny Z Kechagia, Palma Rico-Lastres, Anabel-Lise Le Roux,[...]. Cell 2017
404
6

Origins of avian ocular and periocular tissues.
M C Johnston, D M Noden, R D Hazelton, J L Coulombre, A J Coulombre. Exp Eye Res 1979
397
6

ERK signaling promotes cell motility by inducing the localization of myosin 1E to lamellipodial tips.
Susumu Tanimura, Junya Hashizume, Naoya Arichika, Kazushi Watanabe, Kaname Ohyama, Kohsuke Takeda, Michiaki Kohno. J Cell Biol 2016
17
6

Tumor invasion in the absence of epithelial-mesenchymal transition: podoplanin-mediated remodeling of the actin cytoskeleton.
Andreas Wicki, François Lehembre, Nikolaus Wick, Brigitte Hantusch, Dontscho Kerjaschki, Gerhard Christofori. Cancer Cell 2006
425
6

Targeting miR-223 in neutrophils enhances the clearance of Staphylococcus aureus in infected wounds.
Maiko de Kerckhove, Katsuya Tanaka, Takahiro Umehara, Momoko Okamoto, Sotaro Kanematsu, Hiroko Hayashi, Hiroki Yano, Soushi Nishiura, Shiho Tooyama, Yutaka Matsubayashi,[...]. EMBO Mol Med 2018
16
6


Regulation of intracellular calcium by a signalling complex of IRAG, IP3 receptor and cGMP kinase Ibeta.
J Schlossmann, A Ammendola, K Ashman, X Zong, A Huber, G Neubauer, G X Wang, H D Allescher, M Korth, M Wilm,[...]. Nature 2000
338
6

Neural crest derivatives in ocular and periocular structures.
Sophie Creuzet, Christine Vincent, Gérard Couly. Int J Dev Biol 2005
88
6

Characterization of p75 neurotrophin receptor expression in human dental pulp stem cells.
Wenru Pan, Karlea L Kremer, Xenia Kaidonis, Victoria E Ludlow, Mary-Louise Rogers, Jianling Xie, Christopher G Proud, Simon A Koblar. Int J Dev Neurosci 2016
11
9


JASPAR: an open-access database for eukaryotic transcription factor binding profiles.
Albin Sandelin, Wynand Alkema, Pär Engström, Wyeth W Wasserman, Boris Lenhard. Nucleic Acids Res 2004
6

Proteomics. Tissue-based map of the human proteome.
Mathias Uhlén, Linn Fagerberg, Björn M Hallström, Cecilia Lindskog, Per Oksvold, Adil Mardinoglu, Åsa Sivertsson, Caroline Kampf, Evelina Sjöstedt, Anna Asplund,[...]. Science 2015
6

Expression of podoplanin and other lymphatic markers in the human anterior eye segment.
Kerstin Birke, Elke Lütjen-Drecoll, Dontscho Kerjaschki, Marco T Birke. Invest Ophthalmol Vis Sci 2010
43
6

Role of YAP/TAZ in mechanotransduction.
Sirio Dupont, Leonardo Morsut, Mariaceleste Aragona, Elena Enzo, Stefano Giulitti, Michelangelo Cordenonsi, Francesca Zanconato, Jimmy Le Digabel, Mattia Forcato, Silvio Bicciato,[...]. Nature 2011
6

Discovery of molecular markers to discriminate corneal endothelial cells in the human body.
Masahito Yoshihara, Hiroko Ohmiya, Susumu Hara, Satoshi Kawasaki, Yoshihide Hayashizaki, Masayoshi Itoh, Hideya Kawaji, Motokazu Tsujikawa, Kohji Nishida. PLoS One 2015
19
6

Myosin 6 is required for iris development and normal function of the outer retina.
Ivy S Samuels, Brent A Bell, Gwen Sturgill-Short, Lindsey A Ebke, Mary Rayborn, Lanying Shi, Patsy M Nishina, Neal S Peachey. Invest Ophthalmol Vis Sci 2013
9
11

Basic local alignment search tool.
S F Altschul, W Gish, W Miller, E W Myers, D J Lipman. J Mol Biol 1990
6

Transcript-level expression analysis of RNA-seq experiments with HISAT, StringTie and Ballgown.
Mihaela Pertea, Daehwan Kim, Geo M Pertea, Jeffrey T Leek, Steven L Salzberg. Nat Protoc 2016
6

Eye development and retinogenesis.
Whitney Heavner, Larysa Pevny. Cold Spring Harb Perspect Biol 2012
108
6

De novo mutations in the actin genes ACTB and ACTG1 cause Baraitser-Winter syndrome.
Jean-Baptiste Rivière, Bregje W M van Bon, Alexander Hoischen, Stanislav S Kholmanskikh, Brian J O'Roak, Christian Gilissen, Sabine Gijsen, Christopher T Sullivan, Susan L Christian, Omar A Abdul-Rahman,[...]. Nat Genet 2012
166
6

Detection of de novo single nucleotide variants in offspring of atomic-bomb survivors close to the hypocenter by whole-genome sequencing.
Makiko Horai, Hiroyuki Mishima, Chisa Hayashida, Akira Kinoshita, Yoshibumi Nakane, Tatsuki Matsuo, Kazuto Tsuruda, Katsunori Yanagihara, Shinya Sato, Daisuke Imanishi,[...]. J Hum Genet 2018
9
11

Topography of Lymphatic Markers in Human Iris and Ciliary Body.
Alexandra Kaser-Eichberger, Falk Schrödl, Andrea Trost, Clemens Strohmaier, Barbara Bogner, Christian Runge, Karolina Motloch, Daniela Bruckner, Martin Laimer, Simona L Schlereth,[...]. Invest Ophthalmol Vis Sci 2015
13
7

A C1976Y missense mutation in the mouse Ip3r1 gene leads to short-term mydriasis and unfolded protein response in the iris constrictor muscles.
Bing Chen, Chong-Yang Qi, Li Chen, Meng-Jun Dai, Ya-You Miao, Rui Chen, Wan-E Wei, Shun Yang, Hong-Ling Wang, Xiao-Ge Duan,[...]. Exp Anim 2020
1
100

DBTSS/DBKERO for integrated analysis of transcriptional regulation.
Ayako Suzuki, Shin Kawano, Toutai Mitsuyama, Mikita Suyama, Yae Kanai, Katsuhiko Shirahige, Hiroyuki Sasaki, Katsushi Tokunaga, Katsuya Tsuchihara, Sumio Sugano,[...]. Nucleic Acids Res 2018
26
6


The incidence of PAX6 mutation in patients with simple aniridia: an evaluation of mutation detection in 12 cases.
R Axton, I Hanson, S Danes, G Sellar, V van Heyningen, J Prosser. J Med Genet 1997
43
6

Fate maps of neural crest and mesoderm in the mammalian eye.
Philip J Gage, William Rhoades, Sandra K Prucka, Tord Hjalt. Invest Ophthalmol Vis Sci 2005
236
6

Absence of transcription factor c-maf causes abnormal terminal differentiation of hypertrophic chondrocytes during endochondral bone development.
Helen E MacLean, James I Kim, Melvin J Glimcher, Jinxi Wang, Henry M Kronenberg, Laurie H Glimcher. Dev Biol 2003
67
6

A novel splice site variant in ITPR1 gene underlying recessive Gillespie syndrome.
Leda Paganini, Chiara Pesenti, Donatella Milani, Laura Fontana, Silvia Motta, Silvia Maria Sirchia, Giulietta Scuvera, Paola Marchisio, Susanna Esposito, Claudia Maria Cinnante,[...]. Am J Med Genet A 2018
3
33

Ensembl 2020.
Andrew D Yates, Premanand Achuthan, Wasiu Akanni, James Allen, Jamie Allen, Jorge Alvarez-Jarreta, M Ridwan Amode, Irina M Armean, Andrey G Azov, Ruth Bennett,[...]. Nucleic Acids Res 2020
462
6

Requirement for the c-Maf transcription factor in crystallin gene regulation and lens development.
J I Kim, T Li, I C Ho, M J Grusby, L H Glimcher. Proc Natl Acad Sci U S A 1999
180
6

A new MAFia in cancer.
Alain Eychène, Nathalie Rocques, Celio Pouponnot. Nat Rev Cancer 2008
133
6

Abnormal migration and distribution of neural crest cells in Pax6 heterozygous mutant eye, a model for human eye diseases.
Sachiko Kanakubo, Tadashi Nomura, Ken-ichi Yamamura, Jun-ichi Miyazaki, Makoto Tamai, Noriko Osumi. Genes Cells 2006
54
6

Yap and Taz play a crucial role in neural crest-derived craniofacial development.
Jun Wang, Yang Xiao, Chih-Wei Hsu, Idaliz M Martinez-Traverso, Min Zhang, Yan Bai, Mamoru Ishii, Robert E Maxson, Eric N Olson, Mary E Dickinson,[...]. Development 2016
49
6


VISTA : visualizing global DNA sequence alignments of arbitrary length.
C Mayor, M Brudno, J R Schwartz, A Poliakov, E M Rubin, K A Frazer, L S Pachter, I Dubchak. Bioinformatics 2000
672
6

Integrative genomics viewer.
James T Robinson, Helga Thorvaldsdóttir, Wendy Winckler, Mitchell Guttman, Eric S Lander, Gad Getz, Jill P Mesirov. Nat Biotechnol 2011
6

Neural crest-derived multipotent cells in the adult mouse iris stroma.
Miki Kikuchi, Ryuhei Hayashi, Sachiko Kanakubo, Ayumi Ogasawara, Masayuki Yamato, Noriko Osumi, Kohji Nishida. Genes Cells 2011
26
6

The Sequence Alignment/Map format and SAMtools.
Heng Li, Bob Handsaker, Alec Wysoker, Tim Fennell, Jue Ruan, Nils Homer, Gabor Marth, Goncalo Abecasis, Richard Durbin. Bioinformatics 2009
6

The Genome Analysis Toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data.
Aaron McKenna, Matthew Hanna, Eric Banks, Andrey Sivachenko, Kristian Cibulskis, Andrew Kernytsky, Kiran Garimella, David Altshuler, Stacey Gabriel, Mark Daly,[...]. Genome Res 2010
6


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.