A citation-based method for searching scientific literature

Jan Vrbsky, Svetlana Akimcheva, J Matthew Watson, Thomas L Turner, Lucia Daxinger, Boris Vyskot, Werner Aufsatz, Karel Riha. PLoS Genet 2010
Times Cited: 89







List of co-cited articles
1271 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


ERCC1/XPF protects short telomeres from homologous recombination in Arabidopsis thaliana.
Jean-Baptiste Vannier, Annie Depeiges, Charles White, Maria Eugenia Gallego. PLoS Genet 2009
31
16

RAD50 function is essential for telomere maintenance in Arabidopsis.
M E Gallego, C I White. Proc Natl Acad Sci U S A 2001
86
5


Dyskerin is a component of the Arabidopsis telomerase RNP required for telomere maintenance.
Kalpana Kannan, Andrew D L Nelson, Dorothy E Shippen. Mol Cell Biol 2008
42
11

Developmental control of telomere lengths and telomerase activity in plants.
K Riha, J Fajkus, J Siroky, B Vyskot. Plant Cell 1998
92
5


On the chromatin structure of eukaryotic telomeres.
María I Vaquero-Sedas, Miguel A Vega-Palas. Epigenetics 2011
11
45

Two RNA subunits and POT1a are components of Arabidopsis telomerase.
Catherine Cifuentes-Rojas, Kalpana Kannan, Lin Tseng, Dorothy E Shippen. Proc Natl Acad Sci U S A 2011
56
8

Differential regulation of strand-specific transcripts from Arabidopsis centromeric satellite repeats.
Bruce P May, Zachary B Lippman, Yuda Fang, David L Spector, Robert A Martienssen. PLoS Genet 2005
128
5



53BP1 promotes non-homologous end joining of telomeres by increasing chromatin mobility.
Nadya Dimitrova, Yi-Chun M Chen, David L Spector, Titia de Lange. Nature 2008
400
5

SIRT6 is required for maintenance of telomere position effect in human cells.
Ruth I Tennen, Dennis J Bua, Woodring E Wright, Katrin F Chua. Nat Commun 2011
84
5

Origin of concatemeric T7 DNA.
J D Watson. Nat New Biol 1972
5

Drosophila telomeres: an exception providing new insights.
James M Mason, Radmila Capkova Frydrychova, Harald Biessmann. Bioessays 2008
92
5

Telomere elongation is under the control of the RNAi-based mechanism in the Drosophila germline.
Mikhail Savitsky, Dmitry Kwon, Pavel Georgiev, Alla Kalmykova, Vladimir Gvozdev. Genes Dev 2006
122
5

The heterochromatin protein 1 prevents telomere fusions in Drosophila.
L Fanti, G Giovinazzo, M Berloco, S Pimpinelli. Mol Cell 1998
237
5

The human CST complex is a terminator of telomerase activity.
Liuh-Yow Chen, Sophie Redon, Joachim Lingner. Nature 2012
191
5

Conserved nucleoprotein structure at the ends of vertebrate and invertebrate chromosomes.
S Lejnine, V L Makarov, J P Langmore. Proc Natl Acad Sci U S A 1995
135
5


T-loops and the origin of telomeres.
Titia de Lange. Nat Rev Mol Cell Biol 2004
293
5

Nucleosomal organization of telomere-specific chromatin in rat.
V L Makarov, S Lejnine, J Bedoyan, J P Langmore. Cell 1993
142
5


Loss of ATRX, genome instability, and an altered DNA damage response are hallmarks of the alternative lengthening of telomeres pathway.
Courtney A Lovejoy, Wendi Li, Steven Reisenweber, Supawat Thongthip, Joanne Bruno, Titia de Lange, Saurav De, John H J Petrini, Patricia A Sung, Maria Jasin,[...]. PLoS Genet 2012
342
5

Role of TRF2 in the assembly of telomeric chromatin.
Roberta Benetti, Stefan Schoeftner, Purificación Muñoz, Maria A Blasco. Cell Cycle 2008
37
13

Homologous recombination generates T-loop-sized deletions at human telomeres.
Richard C Wang, Agata Smogorzewska, Titia de Lange. Cell 2004
396
5

The telobox, a Myb-related telomeric DNA binding motif found in proteins from yeast, plants and human.
T Bilaud, C E Koering, E Binet-Brasselet, K Ancelin, A Pollice, S M Gasser, E Gilson. Nucleic Acids Res 1996
184
5

Telomere looping in P. sativum (common garden pea).
Anthony J Cesare, Nancy Quinney, Smaranda Willcox, Deepa Subramanian, Jack D Griffith. Plant J 2003
78
6

Arabidopsis POT1 associates with the telomerase RNP and is required for telomere maintenance.
Yulia V Surovtseva, Eugene V Shakirov, Laurent Vespa, Nathan Osbun, Xiangyu Song, Dorothy E Shippen. EMBO J 2007
62
8

The Arabidopsis Pot1 and Pot2 proteins function in telomere length homeostasis and chromosome end protection.
Eugene V Shakirov, Yulia V Surovtseva, Nathan Osbun, Dorothy E Shippen. Mol Cell Biol 2005
90
5

Minisatellite telomeres occur in the family Alliaceae but are lost in Allium.
Eva Sykorová, Jirí Fajkus, Marie Mezníková, Kar Yoong Lim, Kamila Neplechová, Frank R Blattner, Mark W Chase, Andrew R Leitch. Am J Bot 2006
38
13

Comprehensive analysis of silencing mutants reveals complex regulation of the Arabidopsis methylome.
Hume Stroud, Maxim V C Greenberg, Suhua Feng, Yana V Bernatavichute, Steven E Jacobsen. Cell 2013
467
5

TERRA-reinforced association of LSD1 with MRE11 promotes processing of uncapped telomeres.
Antonio Porro, Sascha Feuerhahn, Joachim Lingner. Cell Rep 2014
76
6

Length-dependent processing of telomeres in the absence of telomerase.
Emilie Fallet, Pascale Jolivet, Julien Soudet, Michael Lisby, Eric Gilson, Maria Teresa Teixeira. Nucleic Acids Res 2014
44
11

Using the telobox to search for plant telomere binding proteins.
Vratislav Peška, Petra Procházková Schrumpfová, Jiŕí Fajkus. Curr Protein Pept Sci 2011
16
31

The absence of Arabidopsis-type telomeres in Cestrum and closely related genera Vestia and Sessea (Solanaceae): first evidence from eudicots.
Eva Sykorova, Kar Yoong Lim, Mark W Chase, Sandra Knapp, Ilia Judith Leitch, Andrew Rowland Leitch, Jiri Fajkus. Plant J 2003
63
7

STN1 protects chromosome ends in Arabidopsis thaliana.
Xiangyu Song, Katherine Leehy, Ross T Warrington, Jonathan C Lamb, Yulia V Surovtseva, Dorothy E Shippen. Proc Natl Acad Sci U S A 2008
68
7

MERISTEM DISORGANIZATION1 encodes TEN1, an essential telomere protein that modulates telomerase processivity in Arabidopsis.
Katherine A Leehy, Jung Ro Lee, Xiangyu Song, Kyle B Renfrew, Dorothy E Shippen. Plant Cell 2013
21
23

An alternative telomerase RNA in Arabidopsis modulates enzyme activity in response to DNA damage.
Catherine Cifuentes-Rojas, Andrew D L Nelson, Kara A Boltz, Kalpana Kannan, Xintao She, Dorothy E Shippen. Genes Dev 2012
31
16

The Arabidopsis nucleosome remodeler DDM1 allows DNA methyltransferases to access H1-containing heterochromatin.
Assaf Zemach, M Yvonne Kim, Ping-Hung Hsieh, Devin Coleman-Derr, Leor Eshed-Williams, Ka Thao, Stacey L Harmer, Daniel Zilberman. Cell 2013
502
5

Integrative epigenomic mapping defines four main chromatin states in Arabidopsis.
François Roudier, Ikhlak Ahmed, Caroline Bérard, Alexis Sarazin, Tristan Mary-Huard, Sandra Cortijo, Daniel Bouyer, Erwann Caillieux, Evelyne Duvernois-Berthet, Liza Al-Shikhley,[...]. EMBO J 2011
382
5

Mapping of interaction domains of putative telomere-binding proteins AtTRB1 and AtPOT1b from Arabidopsis thaliana.
Petra Procházková Schrumpfová, Milan Kuchar, Jan Palecek, Jirí Fajkus. FEBS Lett 2008
21
23


Telomere elongation chooses TERRA ALTernatives.
Rajika Arora, Claus M Azzalin. RNA Biol 2015
30
16

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome.
Ben Langmead, Cole Trapnell, Mihai Pop, Steven L Salzberg. Genome Biol 2009
5

Complementary Activities of TELOMERE REPEAT BINDING Proteins and Polycomb Group Complexes in Transcriptional Regulation of Target Genes.
Yue Zhou, Benjamin Hartwig, Geo Velikkakam James, Korbinian Schneeberger, Franziska Turck. Plant Cell 2016
41
12


TERRA and the state of the telomere.
Karsten Rippe, Brian Luke. Nat Struct Mol Biol 2015
72
6

CTCF driven TERRA transcription facilitates completion of telomere DNA replication.
Kate Beishline, Olga Vladimirova, Stephen Tutton, Zhuo Wang, Zhong Deng, Paul M Lieberman. Nat Commun 2017
34
14

DDM1 guards against telomere truncation in Arabidopsis.
Xiaoyuan Xie, Dorothy E Shippen. Plant Cell Rep 2018
8
62


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.