A citation-based method for searching scientific literature

Magda E Price, Allison M Cotton, Lucia L Lam, Pau Farré, Eldon Emberly, Carolyn J Brown, Wendy P Robinson, Michael S Kobor. Epigenetics Chromatin 2013
Times Cited: 307







List of co-cited articles
660 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Integration of summary data from GWAS and eQTL studies predicts complex trait gene targets.
Zhihong Zhu, Futao Zhang, Han Hu, Andrew Bakshi, Matthew R Robinson, Joseph E Powell, Grant W Montgomery, Michael E Goddard, Naomi R Wray, Peter M Visscher,[...]. Nat Genet 2016
661
4

Identifying gene targets for brain-related traits using transcriptomic and methylomic data from blood.
Ting Qi, Yang Wu, Jian Zeng, Futao Zhang, Angli Xue, Longda Jiang, Zhihong Zhu, Kathryn Kemper, Loic Yengo, Zhili Zheng,[...]. Nat Commun 2018
113
4

The new NHGRI-EBI Catalog of published genome-wide association studies (GWAS Catalog).
Jacqueline MacArthur, Emily Bowler, Maria Cerezo, Laurent Gil, Peggy Hall, Emma Hastings, Heather Junkins, Aoife McMahon, Annalisa Milano, Joannella Morales,[...]. Nucleic Acids Res 2017
4

Genetic effects on gene expression across human tissues.
Alexis Battle, Christopher D Brown, Barbara E Engelhardt, Stephen B Montgomery. Nature 2017
4

DNA methylation: conducting the orchestra from exposure to phenotype?
Fleur A D Leenen, Claude P Muller, Jonathan D Turner. Clin Epigenetics 2016
95
4

DNA methylation of cord blood cell types: Applications for mixed cell birth studies.
Kelly M Bakulski, Jason I Feinberg, Shan V Andrews, Jack Yang, Shannon Brown, Stephanie L McKenney, Frank Witter, Jeremy Walston, Andrew P Feinberg, M Daniele Fallin. Epigenetics 2016
158
4

clusterProfiler: an R package for comparing biological themes among gene clusters.
Guangchuang Yu, Li-Gen Wang, Yanyan Han, Qing-Yu He. OMICS 2012
4

Epigenetic modifications and human disease.
Anna Portela, Manel Esteller. Nat Biotechnol 2010
4

ChAMP: updated methylation analysis pipeline for Illumina BeadChips.
Yuan Tian, Tiffany J Morris, Amy P Webster, Zhen Yang, Stephan Beck, Andrew Feber, Andrew E Teschendorff. Bioinformatics 2017
163
4

KEGG: kyoto encyclopedia of genes and genomes.
M Kanehisa, S Goto. Nucleic Acids Res 2000
4

The PedBE clock accurately estimates DNA methylation age in pediatric buccal cells.
Lisa M McEwen, Kieran J O'Donnell, Megan G McGill, Rachel D Edgar, Meaghan J Jones, Julia L MacIsaac, David Tse Shen Lin, Katia Ramadori, Alexander Morin, Nicole Gladish,[...]. Proc Natl Acad Sci U S A 2020
33
12

Genome-wide DNA methylation comparison between live human brain and peripheral tissues within individuals.
Patricia R Braun, Shizhong Han, Benjamin Hing, Yasunori Nagahama, Lindsey N Gaul, Jonathan T Heinzman, Andrew J Grossbach, Liesl Close, Brian J Dlouhy, Matthew A Howard,[...]. Transl Psychiatry 2019
96
4

Longitudinal genome-wide DNA methylation analysis uncovers persistent early-life DNA methylation changes.
Raúl F Pérez, Pablo Santamarina, Juan Ramón Tejedor, Rocío G Urdinguio, Julio Álvarez-Pitti, Pau Redon, Agustín F Fernández, Mario F Fraga, Empar Lurbe. J Transl Med 2019
17
23

DNA hypermethylation and differential gene expression associated with Klinefelter syndrome.
Anne Skakkebæk, Morten Muhlig Nielsen, Christian Trolle, Søren Vang, Henrik Hornshøj, Jakob Hedegaard, Mikkel Wallentin, Anders Bojesen, Jens Michael Hertz, Jens Fedder,[...]. Sci Rep 2018
40
10

DNA methylation profiling of human chromosomes 6, 20 and 22.
Florian Eckhardt, Joern Lewin, Rene Cortese, Vardhman K Rakyan, John Attwood, Matthias Burger, John Burton, Tony V Cox, Rob Davies, Thomas A Down,[...]. Nat Genet 2006
888
4

Guidance for DNA methylation studies: statistical insights from the Illumina EPIC array.
Georgina Mansell, Tyler J Gorrie-Stone, Yanchun Bao, Meena Kumari, Leonard S Schalkwyk, Jonathan Mill, Eilis Hannon. BMC Genomics 2019
61
6

Obesity accelerates epigenetic aging of human liver.
Steve Horvath, Wiebke Erhart, Mario Brosch, Ole Ammerpohl, Witigo von Schönfels, Markus Ahrens, Nils Heits, Jordana T Bell, Pei-Chien Tsai, Tim D Spector,[...]. Proc Natl Acad Sci U S A 2014
357
4


Epigenetic supersimilarity of monozygotic twin pairs.
Timothy E Van Baak, Cristian Coarfa, Pierre-Antoine Dugué, Giovanni Fiorito, Eleonora Laritsky, Maria S Baker, Noah J Kessler, Jianrong Dong, Jack D Duryea, Matt J Silver,[...]. Genome Biol 2018
41
9

A genomic atlas of systemic interindividual epigenetic variation in humans.
Chathura J Gunasekara, C Anthony Scott, Eleonora Laritsky, Maria S Baker, Harry MacKay, Jack D Duryea, Noah J Kessler, Garrett Hellenthal, Alexis C Wood, Kelly R Hodges,[...]. Genome Biol 2019
24
16

CoMeBack: DNA methylation array data analysis for co-methylated regions.
Evan Gatev, Nicole Gladish, Sara Mostafavi, Michael S Kobor. Bioinformatics 2020
7
57

Environmental risk, Oxytocin Receptor Gene (OXTR) methylation and youth callous-unemotional traits: a 13-year longitudinal study.
C A M Cecil, L J Lysenko, S R Jaffee, J-B Pingault, R G Smith, C L Relton, G Woodward, W McArdle, J Mill, E D Barker. Mol Psychiatry 2014
104
3

Prenatal exposure to maternal smoking and offspring DNA methylation across the lifecourse: findings from the Avon Longitudinal Study of Parents and Children (ALSPAC).
Rebecca C Richmond, Andrew J Simpkin, Geoff Woodward, Tom R Gaunt, Oliver Lyttleton, Wendy L McArdle, Susan M Ring, Andrew D A C Smith, Nicholas J Timpson, Kate Tilling,[...]. Hum Mol Genet 2015
224
3


Psychometric properties of the strengths and difficulties questionnaire.
R Goodman. J Am Acad Child Adolesc Psychiatry 2001
3

Distress During Pregnancy: Epigenetic Regulation of Placenta Glucocorticoid-Related Genes and Fetal Neurobehavior.
Catherine Monk, Tianshu Feng, Seonjoo Lee, Izabela Krupska, Frances A Champagne, Benjamin Tycko. Am J Psychiatry 2016
113
3

Crosstalk between SET7/9-dependent methylation and ARTD1-mediated ADP-ribosylation of histone H1.4.
Ingrid Kassner, Marc Barandun, Monika Fey, Florian Rosenthal, Michael O Hottiger. Epigenetics Chromatin 2013
44
6

DNA methylation profiles in monozygotic and dizygotic twins.
Zachary A Kaminsky, Thomas Tang, Sun-Chong Wang, Carolyn Ptak, Gabriel H T Oh, Albert H C Wong, Laura A Feldcamp, Carl Virtanen, Jonas Halfvarson, Curt Tysk,[...]. Nat Genet 2009
428
3

Differences in DNA methylation signatures reveal multiple pathways of progression from adenoma to colorectal cancer.
Yanxin Luo, Chao-Jen Wong, Andrew M Kaz, Slavomir Dzieciatkowski, Kelly T Carter, Shelli M Morris, Jianping Wang, Joseph E Willis, Karen W Makar, Cornelia M Ulrich,[...]. Gastroenterology 2014
103
3

Methylation QTLs are associated with coordinated changes in transcription factor binding, histone modifications, and gene expression levels.
Nicholas E Banovich, Xun Lan, Graham McVicker, Bryce van de Geijn, Jacob F Degner, John D Blischak, Julien Roux, Jonathan K Pritchard, Yoav Gilad. PLoS Genet 2014
156
3

Genome-wide methylation data mirror ancestry information.
Elior Rahmani, Liat Shenhav, Regev Schweiger, Paul Yousefi, Karen Huen, Brenda Eskenazi, Celeste Eng, Scott Huntsman, Donglei Hu, Joshua Galanter,[...]. Epigenetics Chromatin 2017
37
8

Common DNA methylation alterations in multiple brain regions in autism.
C Ladd-Acosta, K D Hansen, E Briem, M D Fallin, W E Kaufmann, A P Feinberg. Mol Psychiatry 2014
179
3




Genome-wide methylomic analysis of monozygotic twins discordant for adolescent depression.
Emma L Dempster, Chloe C Y Wong, Kathryn J Lester, Joe Burrage, Alice M Gregory, Jonathan Mill, Thalia C Eley. Biol Psychiatry 2014
80
3

Increased DNA methylation variability in type 1 diabetes across three immune effector cell types.
Dirk S Paul, Andrew E Teschendorff, Mary A N Dang, Robert Lowe, Mohammed I Hawa, Simone Ecker, Huriya Beyan, Stephanie Cunningham, Alexandra R Fouts, Anita Ramelius,[...]. Nat Commun 2016
80
3

An epigenetic clock analysis of race/ethnicity, sex, and coronary heart disease.
Steve Horvath, Michael Gurven, Morgan E Levine, Benjamin C Trumble, Hillard Kaplan, Hooman Allayee, Beate R Ritz, Brian Chen, Ake T Lu, Tammy M Rickabaugh,[...]. Genome Biol 2016
269
3

Profiling placental and fetal DNA methylation in human neural tube defects.
E Magda Price, Maria S Peñaherrera, Elodie Portales-Casamar, Paul Pavlidis, Margot I Van Allen, Deborah E McFadden, Wendy P Robinson. Epigenetics Chromatin 2016
27
11

Hypoxia alters the epigenetic profile in cultured human placental trophoblasts.
Ryan K C Yuen, Baosheng Chen, John D Blair, Wendy P Robinson, D Michael Nelson. Epigenetics 2013
58
5

Dynamic DNA methylation across diverse human cell lines and tissues.
Katherine E Varley, Jason Gertz, Kevin M Bowling, Stephanie L Parker, Timothy E Reddy, Florencia Pauli-Behn, Marie K Cross, Brian A Williams, John A Stamatoyannopoulos, Gregory E Crawford,[...]. Genome Res 2013
439
3

Widespread DNA hypomethylation at gene enhancer regions in placentas associated with early-onset pre-eclampsia.
John D Blair, Ryan K C Yuen, Brendan K Lim, Deborah E McFadden, Peter von Dadelszen, Wendy P Robinson. Mol Hum Reprod 2013
129
3

MethPrimer: designing primers for methylation PCRs.
Long-Cheng Li, Rajvir Dahiya. Bioinformatics 2002
3

A framework for oligonucleotide microarray preprocessing.
Benilton S Carvalho, Rafael A Irizarry. Bioinformatics 2010
831
3


Tobacco smoking leads to extensive genome-wide changes in DNA methylation.
Sonja Zeilinger, Brigitte Kühnel, Norman Klopp, Hansjörg Baurecht, Anja Kleinschmidt, Christian Gieger, Stephan Weidinger, Eva Lattka, Jerzy Adamski, Annette Peters,[...]. PLoS One 2013
455
3


Cell type specific DNA methylation in cord blood: A 450K-reference data set and cell count-based validation of estimated cell type composition.
Kristina Gervin, Christian Magnus Page, Hans Christian D Aass, Michelle A Jansen, Heidi Elisabeth Fjeldstad, Bettina Kulle Andreassen, Liesbeth Duijts, Joyce B van Meurs, Menno C van Zelm, Vincent W Jaddoe,[...]. Epigenetics 2016
41
7

A comprehensive overview of Infinium HumanMethylation450 data processing.
Sarah Dedeurwaerder, Matthieu Defrance, Martin Bizet, Emilie Calonne, Gianluca Bontempi, François Fuks. Brief Bioinform 2014
101
3



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.