A citation-based method for searching scientific literature

Alicia K Smith, Varun Kilaru, Torsten Klengel, Kristina B Mercer, Bekh Bradley, Karen N Conneely, Kerry J Ressler, Elisabeth B Binder. Am J Med Genet B Neuropsychiatr Genet 2015
Times Cited: 178







List of co-cited articles
807 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Passive and active DNA methylation and the interplay with genetic variation in gene regulation.
Maria Gutierrez-Arcelus, Tuuli Lappalainen, Stephen B Montgomery, Alfonso Buil, Halit Ongen, Alisa Yurovsky, Julien Bryois, Thomas Giger, Luciana Romano, Alexandra Planchon,[...]. Elife 2013
250
4

DNA Methylation in Newborns and Maternal Smoking in Pregnancy: Genome-wide Consortium Meta-analysis.
Bonnie R Joubert, Janine F Felix, Paul Yousefi, Kelly M Bakulski, Allan C Just, Carrie Breton, Sarah E Reese, Christina A Markunas, Rebecca C Richmond, Cheng-Jian Xu,[...]. Am J Hum Genet 2016
363
4

Genome-wide methylomic analysis of monozygotic twins discordant for adolescent depression.
Emma L Dempster, Chloe C Y Wong, Kathryn J Lester, Joe Burrage, Alice M Gregory, Jonathan Mill, Thalia C Eley. Biol Psychiatry 2014
79
5

Reference-free cell mixture adjustments in analysis of DNA methylation data.
Eugene Andres Houseman, John Molitor, Carmen J Marsit. Bioinformatics 2014
248
4

Recommendations for the design and analysis of epigenome-wide association studies.
Karin B Michels, Alexandra M Binder, Sarah Dedeurwaerder, Charles B Epstein, John M Greally, Ivo Gut, E Andres Houseman, Benedetta Izzi, Karl T Kelsey, Alexander Meissner,[...]. Nat Methods 2013
220
4

Epigenome-wide association studies for common human diseases.
Vardhman K Rakyan, Thomas A Down, David J Balding, Stephan Beck. Nat Rev Genet 2011
730
4

De novo identification of differentially methylated regions in the human genome.
Timothy J Peters, Michael J Buckley, Aaron L Statham, Ruth Pidsley, Katherine Samaras, Reginald V Lord, Susan J Clark, Peter L Molloy. Epigenetics Chromatin 2015
313
4

Genome-wide methylation profiles reveal quantitative views of human aging rates.
Gregory Hannum, Justin Guinney, Ling Zhao, Li Zhang, Guy Hughes, SriniVas Sadda, Brandy Klotzle, Marina Bibikova, Jian-Bing Fan, Yuan Gao,[...]. Mol Cell 2013
4

Adjusting for Cell Type Composition in DNA Methylation Data Using a Regression-Based Approach.
Meaghan J Jones, Sumaiya A Islam, Rachel D Edgar, Michael S Kobor. Methods Mol Biol 2017
28
14

PLINK: a tool set for whole-genome association and population-based linkage analyses.
Shaun Purcell, Benjamin Neale, Kathe Todd-Brown, Lori Thomas, Manuel A R Ferreira, David Bender, Julian Maller, Pamela Sklar, Paul I W de Bakker, Mark J Daly,[...]. Am J Hum Genet 2007
4


Longitudinal, genome-scale analysis of DNA methylation in twins from birth to 18 months of age reveals rapid epigenetic change in early life and pair-specific effects of discordance.
David Martino, Yuk Jin Loke, Lavinia Gordon, Miina Ollikainen, Mark N Cruickshank, Richard Saffery, Jeffrey M Craig. Genome Biol 2013
121
4

Epigenome-wide association study of body mass index, and the adverse outcomes of adiposity.
Simone Wahl, Alexander Drong, Benjamin Lehne, Marie Loh, William R Scott, Sonja Kunze, Pei-Chien Tsai, Janina S Ried, Weihua Zhang, Youwen Yang,[...]. Nature 2017
371
4



Severe psychosocial deprivation in early childhood is associated with increased DNA methylation across a region spanning the transcription start site of CYP2E1.
R Kumsta, S J Marzi, J Viana, E L Dempster, B Crawford, M Rutter, J Mill, E J S Sonuga-Barke. Transl Psychiatry 2016
29
13

Traumatic stress and human DNA methylation: a critical review.
Christiaan H Vinkers, Aimilia Lydia Kalafateli, Bart P F Rutten, Martien J Kas, Zachary Kaminsky, Jonathan D Turner, Marco P M Boks. Epigenomics 2015
50
8

DNA methylation patterns associate with genetic and gene expression variation in HapMap cell lines.
Jordana T Bell, Athma A Pai, Joseph K Pickrell, Daniel J Gaffney, Roger Pique-Regi, Jacob F Degner, Yoav Gilad, Jonathan K Pritchard. Genome Biol 2011
561
4

Genetic Drivers of Epigenetic and Transcriptional Variation in Human Immune Cells.
Lu Chen, Bing Ge, Francesco Paolo Casale, Louella Vasquez, Tony Kwan, Diego Garrido-Martín, Stephen Watt, Ying Yan, Kousik Kundu, Simone Ecker,[...]. Cell 2016
224
4

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources.
Da Wei Huang, Brad T Sherman, Richard A Lempicki. Nat Protoc 2009
4

Exposure to Violence Accelerates Epigenetic Aging in Children.
Tanja Jovanovic, L Alexander Vance, Dorthie Cross, Anna K Knight, Varun Kilaru, Vasiliki Michopoulos, Torsten Klengel, Alicia K Smith. Sci Rep 2017
54
7

Blood-based profiles of DNA methylation predict the underlying distribution of cell types: a validation analysis.
Devin C Koestler, Brock Christensen, Margaret R Karagas, Carmen J Marsit, Scott M Langevin, Karl T Kelsey, John K Wiencke, E Andres Houseman. Epigenetics 2013
146
4

Relationship of childhood abuse and household dysfunction to many of the leading causes of death in adults. The Adverse Childhood Experiences (ACE) Study.
V J Felitti, R F Anda, D Nordenberg, D F Williamson, A M Spitz, V Edwards, M P Koss, J S Marks. Am J Prev Med 1998
4

DNA methylation-based measures of biological age: meta-analysis predicting time to death.
Brian H Chen, Riccardo E Marioni, Elena Colicino, Marjolein J Peters, Cavin K Ward-Caviness, Pei-Chien Tsai, Nicholas S Roetker, Allan C Just, Ellen W Demerath, Weihua Guan,[...]. Aging (Albany NY) 2016
370
4

Accelerated DNA methylation age in adolescent girls: associations with elevated diurnal cortisol and reduced hippocampal volume.
E G Davis, K L Humphreys, L M McEwen, M D Sacchet, M C Camacho, J L MacIsaac, D T S Lin, M S Kobor, I H Gotlib. Transl Psychiatry 2017
30
13

Conserved epigenetic sensitivity to early life experience in the rat and human hippocampus.
Matthew Suderman, Patrick O McGowan, Aya Sasaki, Tony C T Huang, Michael T Hallett, Michael J Meaney, Gustavo Turecki, Moshe Szyf. Proc Natl Acad Sci U S A 2012
182
4

DNA methylation differences at the glucocorticoid receptor gene in depression are related to functional alterations in hypothalamic-pituitary-adrenal axis activity and to early life emotional abuse.
Chloё Farrell, Kelly Doolin, Niamh O' Leary, Chaitra Jairaj, Darren Roddy, Leonardo Tozzi, Derek Morris, Andrew Harkin, Thomas Frodl, Zsófia Nemoda,[...]. Psychiatry Res 2018
30
13

Maternal care, hippocampal glucocorticoid receptors, and hypothalamic-pituitary-adrenal responses to stress.
D Liu, J Diorio, B Tannenbaum, C Caldji, D Francis, A Freedman, S Sharma, D Pearson, P M Plotsky, M J Meaney. Science 1997
4

Genome-wide DNA methylation levels and altered cortisol stress reactivity following childhood trauma in humans.
Lotte C Houtepen, Christiaan H Vinkers, Tania Carrillo-Roa, Marieke Hiemstra, Pol A van Lier, Wim Meeus, Susan Branje, Christine M Heim, Charles B Nemeroff, Jonathan Mill,[...]. Nat Commun 2016
101
4

Childhood abuse is associated with methylation of multiple loci in adult DNA.
Matthew Suderman, Nada Borghol, Jane J Pappas, Snehal M Pinto Pereira, Marcus Pembrey, Clyde Hertzman, Chris Power, Moshe Szyf. BMC Med Genomics 2014
103
4

Epigenetic correlates of neonatal contact in humans.
Sarah R Moore, Lisa M McEwen, Jill Quirt, Alex Morin, Sarah M Mah, Ronald G Barr, W Thomas Boyce, Michael S Kobor. Dev Psychopathol 2017
29
13

Early-life experience, epigenetics, and the developing brain.
Marija Kundakovic, Frances A Champagne. Neuropsychopharmacology 2015
131
4

The Contributions of Maternal Sensitivity and Maternal Depressive Symptoms to Epigenetic Processes and Neuroendocrine Functioning.
Elisabeth Conradt, Katheleen Hawes, Dylan Guerin, David A Armstrong, Carmen J Marsit, Edward Tronick, Barry M Lester. Child Dev 2016
39
10

Correlation of Smoking-Associated DNA Methylation Changes in Buccal Cells With DNA Methylation Changes in Epithelial Cancer.
Andrew E Teschendorff, Zhen Yang, Andrew Wong, Christodoulos P Pipinikas, Yinming Jiao, Allison Jones, Shahzia Anjum, Rebecca Hardy, Helga B Salvesen, Christina Thirlwell,[...]. JAMA Oncol 2015
110
4

Oxytocin increases trust in humans.
Michael Kosfeld, Markus Heinrichs, Paul J Zak, Urs Fischbacher, Ernst Fehr. Nature 2005
4

Comprehensive analysis of DNA methylation data with RnBeads.
Yassen Assenov, Fabian Müller, Pavlo Lutsik, Jörn Walter, Thomas Lengauer, Christoph Bock. Nat Methods 2014
352
4

Association of DNA methylation in BDNF with escitalopram treatment response in depressed Chinese Han patients.
Peipei Wang, Cuizhen Zhang, Qinyu Lv, Chenxi Bao, Hong Sun, Guo Ma, Yiru Fang, Zhenghui Yi, Weimin Cai. Eur J Clin Pharmacol 2018
12
33



Tobacco smoking leads to extensive genome-wide changes in DNA methylation.
Sonja Zeilinger, Brigitte Kühnel, Norman Klopp, Hansjörg Baurecht, Anja Kleinschmidt, Christian Gieger, Stephan Weidinger, Eva Lattka, Jerzy Adamski, Annette Peters,[...]. PLoS One 2013
447
4


Prenatal stress exposure, oxytocin receptor gene (OXTR) methylation, and child autistic traits: The moderating role of OXTR rs53576 genotype.
Jolien Rijlaarsdam, Marinus H van IJzendoorn, Frank C Verhulst, Vincent W V Jaddoe, Janine F Felix, Henning Tiemeier, Marian J Bakermans-Kranenburg. Autism Res 2017
42
9

Early nurture epigenetically tunes the oxytocin receptor.
Allison M Perkeybile, C Sue Carter, Kelly L Wroblewski, Meghan H Puglia, William M Kenkel, Travis S Lillard, Themistoclis Karaoli, Simon G Gregory, Niaz Mohammadi, Larissa Epstein,[...]. Psychoneuroendocrinology 2019
32
12

Genome-wide analysis of DNA methylation in buccal cells: a study of monozygotic twins and mQTLs.
Jenny van Dongen, Erik A Ehli, Rick Jansen, Catharina E M van Beijsterveldt, Gonneke Willemsen, Jouke J Hottenga, Noah A Kallsen, Shanna A Peyton, Charles E Breeze, Cornelis Kluft,[...]. Epigenetics Chromatin 2018
14
28

limma powers differential expression analyses for RNA-sequencing and microarray studies.
Matthew E Ritchie, Belinda Phipson, Di Wu, Yifang Hu, Charity W Law, Wei Shi, Gordon K Smyth. Nucleic Acids Res 2015
4

Variation, patterns, and temporal stability of DNA methylation: considerations for epigenetic epidemiology.
Rudolf P Talens, Dorret I Boomsma, Elmar W Tobi, Dennis Kremer, J Wouter Jukema, Gonneke Willemsen, Hein Putter, P Eline Slagboom, Bastiaan T Heijmans. FASEB J 2010
218
4

The early care environment and DNA methylome variation in childhood.
Elika Garg, Li Chen, Thao T T Nguyen, Irina Pokhvisneva, Lawrence M Chen, Eva Unternaehrer, Julia L MacIsaac, Lisa M McEwen, Sarah M Mah, Helene Gaudreau,[...]. Dev Psychopathol 2018
13
30

An investigation of child maltreatment and epigenetic mechanisms of mental and physical health risk.
Dante Cicchetti, Susan Hetzel, Fred A Rogosch, Elizabeth D Handley, Sheree L Toth. Dev Psychopathol 2016
21
19

Oxytocin receptor gene methylation and substance use problems among young African American men.
Steven M Kogan, Junhan Cho, Steven R H Beach, Alicia K Smith, Shota Nishitani. Drug Alcohol Depend 2018
9
44

Epigenetic modification of the glucocorticoid receptor gene is linked to traumatic memory and post-traumatic stress disorder risk in genocide survivors.
Vanja Vukojevic, Iris-T Kolassa, Matthias Fastenrath, Leo Gschwind, Klara Spalek, Annette Milnik, Angela Heck, Christian Vogler, Sarah Wilker, Philippe Demougin,[...]. J Neurosci 2014
96
4


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.