A citation-based method for searching scientific literature

Jaewon Min, Woodring E Wright, Jerry W Shay. Nucleic Acids Res 2017
Times Cited: 31







List of co-cited articles
313 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Telomere length regulates TERRA levels through increased trimethylation of telomeric H3K9 and HP1α.
Nausica Arnoult, Amandine Van Beneden, Anabelle Decottignies. Nat Struct Mol Biol 2012
154
6

Alternative lengthening of telomeres: remodeling the telomere architecture.
Dimitri Conomos, Hilda A Pickett, Roger R Reddel. Front Oncol 2013
61
6

Prognostic significance of telomere maintenance mechanisms in pediatric high-grade gliomas.
Kathleen Dorris, Matthew Sobo, Arzu Onar-Thomas, Eshini Panditharatna, Charles B Stevenson, Sharon L Gardner, Mariko D Dewire, Christopher R Pierson, Randal Olshefski, Sandra A Rempel,[...]. J Neurooncol 2014
27
7

Alternative lengthening of telomeres (ALT) and chromatin: is there a connection?
Thalia Nittis, Lionel Guittat, Sheila A Stewart. Biochimie 2008
26
7

Role of Tet proteins in enhancer activity and telomere elongation.
Falong Lu, Yuting Liu, Lan Jiang, Shinpei Yamaguchi, Yi Zhang. Genes Dev 2014
158
6


Complex interactions between the DNA-damage response and mammalian telomeres.
Nausica Arnoult, Jan Karlseder. Nat Struct Mol Biol 2015
109
6

Telomerase Regulation from Beginning to the End.
Deanna Elise MacNeil, Hélène Jeanne Bensoussan, Chantal Autexier. Genes (Basel) 2016
48
6


ATRX interacts with H3.3 in maintaining telomere structural integrity in pluripotent embryonic stem cells.
Lee H Wong, James D McGhie, Marcus Sim, Melissa A Anderson, Soyeon Ahn, Ross D Hannan, Amee J George, Kylie A Morgan, Jeffrey R Mann, K H Andy Choo. Genome Res 2010
262
6

DNA methylation mediated up-regulation of TERRA non-coding RNA is coincident with elongated telomeres in the human placenta.
Boris Novakovic, Christine E Napier, Regan Vryer, Eva Dimitriadis, Ursula Manuelpillai, Andrew Sharkey, Jeffrey M Craig, Roger R Reddel, Richard Saffery. Mol Hum Reprod 2016
18
11

Hayflick, his limit, and cellular ageing.
J W Shay, W E Wright. Nat Rev Mol Cell Biol 2000
331
6

HDAC9 regulates the alternative lengthening of telomere (ALT) pathway via the formation of ALT-associated PML bodies.
Mohd Raeed Jamiruddin, Taku Kaitsuka, Farzana Hakim, Atsushi Fujimura, Fan-Yan Wei, Hisato Saitoh, Kazuhito Tomizawa. Biochem Biophys Res Commun 2016
5
40

The non-coding RNA TERRA is a natural ligand and direct inhibitor of human telomerase.
Sophie Redon, Patrick Reichenbach, Joachim Lingner. Nucleic Acids Res 2010
226
6

Nuclear respiratory factor 1 and endurance exercise promote human telomere transcription.
Aurélie Diman, Joanna Boros, Florian Poulain, Julie Rodriguez, Marin Purnelle, Harikleia Episkopou, Luc Bertrand, Marc Francaux, Louise Deldicque, Anabelle Decottignies. Sci Adv 2016
45
6

Assembly of telomeric chromatin to create ALTernative endings.
Roderick J O'Sullivan, Genevieve Almouzni. Trends Cell Biol 2014
37
6


How stem cells age and why this makes us grow old.
Norman E Sharpless, Ronald A DePinho. Nat Rev Mol Cell Biol 2007
572
6

The first molecular details of ALT in human tumor cells.
Alessandra Muntoni, Roger R Reddel. Hum Mol Genet 2005
156
6


The 2016 World Health Organization Classification of Tumors of the Central Nervous System: a summary.
David N Louis, Arie Perry, Guido Reifenberger, Andreas von Deimling, Dominique Figarella-Branger, Webster K Cavenee, Hiroko Ohgaki, Otmar D Wiestler, Paul Kleihues, David W Ellison. Acta Neuropathol 2016
6

TRF1 phosphorylation on T271 modulates telomerase-dependent telomere length maintenance as well as the formation of ALT-associated PML bodies.
Angus Ho, Florence R Wilson, Stephanie L Peragine, Kajaparan Jeyanthan, Taylor R H Mitchell, Xu-Dong Zhu. Sci Rep 2016
8
25

The C-Circle Assay for alternative-lengthening-of-telomeres activity.
Jeremy D Henson, Loretta M Lau, Sylvia Koch, Nancy Martin La Rotta, Rebecca A Dagg, Roger R Reddel. Methods 2017
53
6

Alternative lengthening of telomeres does exist in various canine sarcomas.
Theresa Kreilmeier, Sandra Sampl, Abigail J Deloria, Ingrid Walter, Martin Reifinger, Marlene Hauck, Luke B Borst, Klaus Holzmann, Miriam Kleiter. Mol Carcinog 2017
6
33

Alternative lengthening of telomeres: recurrent cytogenetic aberrations and chromosome stability under extreme telomere dysfunction.
Despoina Sakellariou, Maria Chiourea, Christina Raftopoulou, Sarantis Gagos. Neoplasia 2013
18
11



Human RPA phosphorylation by ATR stimulates DNA synthesis and prevents ssDNA accumulation during DNA-replication stress.
Vitaly M Vassin, Rachel William Anantha, Elena Sokolova, Shlomo Kanner, James A Borowiec. J Cell Sci 2009
104
6



Swi1Timeless Prevents Repeat Instability at Fission Yeast Telomeres.
Mariana C Gadaleta, Mukund M Das, Hideki Tanizawa, Ya-Ting Chang, Ken-ichi Noma, Toru M Nakamura, Eishi Noguchi. PLoS Genet 2016
14
14

DAXX/ATRX, MEN1, and mTOR pathway genes are frequently altered in pancreatic neuroendocrine tumors.
Yuchen Jiao, Chanjuan Shi, Barish H Edil, Roeland F de Wilde, David S Klimstra, Anirban Maitra, Richard D Schulick, Laura H Tang, Christopher L Wolfgang, Michael A Choti,[...]. Science 2011
6

Targeting BRCA1 and BRCA2 Deficiencies with G-Quadruplex-Interacting Compounds.
Jutta Zimmer, Eliana M C Tacconi, Cecilia Folio, Sophie Badie, Manuela Porru, Kerstin Klare, Manuela Tumiati, Enni Markkanen, Swagata Halder, Anderson Ryan,[...]. Mol Cell 2016
109
6

Comparative biology of mammalian telomeres: hypotheses on ancestral states and the roles of telomeres in longevity determination.
Nuno M V Gomes, Oliver A Ryder, Marlys L Houck, Suellen J Charter, William Walker, Nicholas R Forsyth, Steven N Austad, Chris Venditti, Mark Pagel, Jerry W Shay,[...]. Aging Cell 2011
222
6

Telomeric DNA damage is irreparable and causes persistent DNA-damage-response activation.
Marzia Fumagalli, Francesca Rossiello, Michela Clerici, Sara Barozzi, Davide Cittaro, Jessica M Kaplunov, Gabriele Bucci, Miryana Dobreva, Valentina Matti, Christian M Beausejour,[...]. Nat Cell Biol 2012
430
6

Estimating telomere length from whole genome sequence data.
Zhihao Ding, Massimo Mangino, Abraham Aviv, Tim Spector, Richard Durbin. Nucleic Acids Res 2014
66
6

A Natural Product Telomerase Activator Lengthens Telomeres in Humans: A Randomized, Double Blind, and Placebo Controlled Study.
Laura Salvador, Gunasekaran Singaravelu, Calvin B Harley, Peter Flom, Anitha Suram, Joseph M Raffaele. Rejuvenation Res 2016
36
6

Telomere-associated aging disorders.
Patricia L Opresko, Jerry W Shay. Ageing Res Rev 2017
76
6

Age-associated telomere attrition of lymphocytes in vivo is co-ordinated with changes in telomerase activity, composition of lymphocyte subsets and health conditions.
Yun Lin, Amanda Damjanovic, E Jeffrey Metter, Huy Nguyen, Thai Truong, Kevin Najarro, Christa Morris, Dan L Longo, Ming Zhan, Luigi Ferrucci,[...]. Clin Sci (Lond) 2015
76
6

Accelerated telomere shortening in response to life stress.
Elissa S Epel, Elizabeth H Blackburn, Jue Lin, Firdaus S Dhabhar, Nancy E Adler, Jason D Morrow, Richard M Cawthon. Proc Natl Acad Sci U S A 2004
6

The telomere syndromes.
Mary Armanios, Elizabeth H Blackburn. Nat Rev Genet 2012
568
6

The rate of increase of short telomeres predicts longevity in mammals.
Elsa Vera, Bruno Bernardes de Jesus, Miguel Foronda, Juana M Flores, Maria A Blasco. Cell Rep 2012
101
6

Telomere measurement by quantitative PCR.
Richard M Cawthon. Nucleic Acids Res 2002
6

Alternative lengthening of telomeres is enriched in, and impacts survival of TP53 mutant pediatric malignant brain tumors.
Joshua Mangerel, Aryeh Price, Pedro Castelo-Branco, Jack Brzezinski, Pawel Buczkowicz, Patricia Rakopoulos, Diana Merino, Berivan Baskin, Jonathan Wasserman, Matthew Mistry,[...]. Acta Neuropathol 2014
27
7

Evidence for alternative lengthening of telomeres in liposarcomas in the absence of ALT-associated PML bodies.
Jennie N Jeyapalan, Aaron Mendez-Bermudez, Nadia Zaffaroni, Yuri E Dubrova, Nicola J Royle. Int J Cancer 2008
41
6

The chromatin remodelling factor ATRX suppresses R-loops in transcribed telomeric repeats.
Diu Tt Nguyen, Hsiao Phin J Voon, Barbara Xella, Caroline Scott, David Clynes, Christian Babbs, Helena Ayyub, Jon Kerry, Jacqueline A Sharpe, Jackie A Sloane-Stanley,[...]. EMBO Rep 2017
49
6

A review of trabectedin (ET-743): a unique mechanism of action.
Maurizio D'Incalci, Carlos M Galmarini. Mol Cancer Ther 2010
273
6


The ATRX syndrome protein forms a chromatin-remodeling complex with Daxx and localizes in promyelocytic leukemia nuclear bodies.
Yutong Xue, Richard Gibbons, Zhijiang Yan, Dafeng Yang, Tarra L McDowell, Salvatore Sechi, Jun Qin, Sharleen Zhou, Doug Higgs, Weidong Wang. Proc Natl Acad Sci U S A 2003
259
6

Telomeric RNA-DNA hybrids affect telomere-length dynamics and senescence.
Bettina Balk, André Maicher, Martina Dees, Julia Klermund, Sarah Luke-Glaser, Katharina Bender, Brian Luke. Nat Struct Mol Biol 2013
180
6


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.