A citation-based method for searching scientific literature

Jodie Ouahed, Elizabeth Spencer, Daniel Kotlarz, Dror S Shouval, Matthew Kowalik, Kaiyue Peng, Michael Field, Leslie Grushkin-Lerner, Sung-Yun Pai, Athos Bousvaros, Judy Cho, Carmen Argmann, Eric Schadt, Dermot P B Mcgovern, Michal Mokry, Edward Nieuwenhuis, Hans Clevers, Fiona Powrie, Holm Uhlig, Christoph Klein, Aleixo Muise, Marla Dubinsky, Scott B Snapper. Inflamm Bowel Dis 2020
Times Cited: 34







List of co-cited articles
260 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Multi-omics analysis of inflammatory bowel disease.
Hu Huang, Pajau Vangay, Christopher E McKinlay, Dan Knights. Immunol Lett 2014
25
8

The 1000IBD project: multi-omics data of 1000 inflammatory bowel disease patients; data release 1.
Floris Imhann, K J Van der Velde, R Barbieri, R Alberts, M D Voskuil, A Vich Vila, V Collij, L M Spekhorst, K W J Van der Sloot, V Peters,[...]. BMC Gastroenterol 2019
32
6

Immunopathogenesis of IBD: current state of the art.
Heitor S P de Souza, Claudio Fiocchi. Nat Rev Gastroenterol Hepatol 2016
661
5

The gut microbiota in IBD.
Chaysavanh Manichanh, Natalia Borruel, Francesc Casellas, Francisco Guarner. Nat Rev Gastroenterol Hepatol 2012
682
5

Evaluation of the pediatric crohn disease activity index: a prospective multicenter experience.
Jeffrey Hyams, James Markowitz, Anthony Otley, Joel Rosh, David Mack, Athos Bousvaros, Subra Kugathasan, M Pfefferkorn, Vasundhara Tolia, Jonathan Evans,[...]. J Pediatr Gastroenterol Nutr 2005
226
5


Primary sclerosing cholangitis, autoimmune hepatitis, and overlap in Utah children: epidemiology and natural history.
Mark Deneau, M Kyle Jensen, John Holmen, Marc S Williams, Linda S Book, Stephen L Guthery. Hepatology 2013
113
5

GeneMatcher: a matching tool for connecting investigators with an interest in the same gene.
Nara Sobreira, François Schiettecatte, David Valle, Ada Hamosh. Hum Mutat 2015
678
5

A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff: SNPs in the genome of Drosophila melanogaster strain w1118; iso-2; iso-3.
Pablo Cingolani, Adrian Platts, Le Lily Wang, Melissa Coon, Tung Nguyen, Luan Wang, Susan J Land, Xiangyi Lu, Douglas M Ruden. Fly (Austin) 2012
5

The natural history of primary sclerosing cholangitis in 781 children: A multicenter, international collaboration.
Mark R Deneau, Wael El-Matary, Pamela L Valentino, Reham Abdou, Khaled Alqoaer, Mansi Amin, Achiya Z Amir, Marcus Auth, Fateh Bazerbachi, Annemarie Broderick,[...]. Hepatology 2017
87
5

Genetics of primary sclerosing cholangitis and pathophysiological implications.
Xiaojun Jiang, Tom H Karlsen. Nat Rev Gastroenterol Hepatol 2017
49
5

Infliximab in young paediatric IBD patients: it is all about the dosing.
Maria M E Jongsma, Dwight A Winter, Hien Q Huynh, Lorenzo Norsa, Seamus Hussey, Kaija-Leena Kolho, Jiri Bronsky, Amit Assa, Shlomi Cohen, Raffi Lev-Tzion,[...]. Eur J Pediatr 2020
16
12

Outcome following aminosalicylate therapy in children newly diagnosed as having ulcerative colitis.
Bella Zeisler, Trudy Lerer, James Markowitz, David Mack, Anne Griffiths, Athos Bousvaros, David Keljo, Joel Rosh, Jonathan Evans, Michael Kappelman,[...]. J Pediatr Gastroenterol Nutr 2013
28
7

Development, validation, and evaluation of a pediatric ulcerative colitis activity index: a prospective multicenter study.
Dan Turner, Anthony R Otley, David Mack, Jeffrey Hyams, J de Bruijne, Krista Uusoue, Thomas D Walters, Mary Zachos, Petar Mamula, Dorcas E Beaton,[...]. Gastroenterology 2007
621
5

The Unique Disease Course of Children with Very Early onset-Inflammatory Bowel Disease.
Judith R Kelsen, Maire A Conrad, Noor Dawany, Trusha Patel, Rawan Shraim, Audrey Merz, Kelly Maurer, Kathleen E Sullivan, Marcella Devoto. Inflamm Bowel Dis 2020
13
15

First- and Second-Line Pharmacotherapies for Patients With Moderate to Severely Active Ulcerative Colitis: An Updated Network Meta-Analysis.
Siddharth Singh, Mohammad Hassan Murad, Mathurin Fumery, Parambir S Dulai, William J Sandborn. Clin Gastroenterol Hepatol 2020
83
5

Distinctive inflammatory bowel disease phenotype in primary sclerosing cholangitis.
A Boudewijn de Vries, Marcel Janse, Hans Blokzijl, Rinse K Weersma. World J Gastroenterol 2015
83
5

Differentiating ulcerative colitis from Crohn disease in children and young adults: report of a working group of the North American Society for Pediatric Gastroenterology, Hepatology, and Nutrition and the Crohn's and Colitis Foundation of America.
Athos Bousvaros, Donald A Antonioli, Richard B Colletti, Marla C Dubinsky, Jonathan N Glickman, Benjamin D Gold, Anne M Griffiths, Gareth P Jevon, Leslie M Higuchi, Jeffrey S Hyams,[...]. J Pediatr Gastroenterol Nutr 2007
282
5

Natural History of Adult Ulcerative Colitis in Population-based Cohorts: A Systematic Review.
Mathurin Fumery, Siddharth Singh, Parambir S Dulai, Corinne Gower-Rousseau, Laurent Peyrin-Biroulet, William J Sandborn. Clin Gastroenterol Hepatol 2018
146
5

ACG Clinical Guideline: Ulcerative Colitis in Adults.
David T Rubin, Ashwin N Ananthakrishnan, Corey A Siegel, Bryan G Sauer, Millie D Long. Am J Gastroenterol 2019
396
5

Progression to colectomy in the era of biologics: A single center experience with pediatric ulcerative colitis.
Faith D Ihekweazu, Tatiana Fofanova, Ryan Palacios, Avanthi Ajjarapu, Lina Karam, Adam M Vogel, J R Rodriguez, Richard Kellermayer. J Pediatr Surg 2020
4
50

Natural History of  Very Early Onset Inflammatory Bowel Disease in North America: A Retrospective Cohort Study.
Basavaraj Kerur, Eric I Benchimol, Karoline Fiedler, Marisa Stahl, Jeffrey Hyams, Michael Stephens, Ying Lu, Marian Pfefferkorn, Raza Alkhouri, Jennifer Strople,[...]. Inflamm Bowel Dis 2021
9
22

Selecting Therapeutic Targets in Inflammatory Bowel Disease (STRIDE): Determining Therapeutic Goals for Treat-to-Target.
L Peyrin-Biroulet, W Sandborn, B E Sands, W Reinisch, W Bemelman, R V Bryant, G D'Haens, I Dotan, M Dubinsky, B Feagan,[...]. Am J Gastroenterol 2015
981
5

Development and Validation of Diagnostic Criteria for IBD Subtypes Including IBD-unclassified in Children: a Multicentre Study From the Pediatric IBD Porto Group of ESPGHAN.
Liron Birimberg-Schwartz, David M Zucker, Amichay Akriv, Salvatore Cucchiara, Fiona L Cameron, David C Wilson, Iza Lazowska, Lambri Yianni, Siba Prosad Paul, Claudio Romano,[...]. J Crohns Colitis 2017
33
6

ACG Clinical Guideline: Management of Crohn's Disease in Adults.
Gary R Lichtenstein, Edward V Loftus, Kim L Isaacs, Miguel D Regueiro, Lauren B Gerson, Bruce E Sands. Am J Gastroenterol 2018
454
5

Histopathology of Non-IBD Colitis. A practical approach from the Italian Group for the study of the gastrointestinal tract (GIPAD).
Vincenzo Villanacci, Luca Reggiani-Bonetti, Giuseppe Leoncini, Paola Parente, Moris Cadei, Luca Albarello, Giulio Mandelli, Alessandro Caputo. Pathologica 2021
5
40

ECCO Position Paper: Harmonization of the Approach to Ulcerative Colitis Histopathology.
Fernando Magro, Glen Doherty, Laurent Peyrin-Biroulet, Magali Svrcek, Paula Borralho, Alissa Walsh, Fatima Carneiro, Francesca Rosini, Gert de Hertogh, Luc Biedermann,[...]. J Crohns Colitis 2020
35
5

Overlap, common features, and essential differences in pediatric granulomatous inflammatory bowel disease.
Gerard M Damen, J Han van Krieken, Esther Hoppenreijs, Erim van Os, Jules J M Tolboom, Adillia Warris, Jan-Bart Yntema, Edward E S Nieuwenhuis, Johanna C Escher. J Pediatr Gastroenterol Nutr 2010
35
5

Frequency and risk factors for extraintestinal manifestations in the Swiss inflammatory bowel disease cohort.
Stephan R Vavricka, Lionel Brun, Pierluigi Ballabeni, Valérie Pittet, Bettina Mareike Prinz Vavricka, Jonas Zeitz, Gerhard Rogler, Alain M Schoepfer. Am J Gastroenterol 2011
273
5

Antibody markers in the diagnosis of inflammatory bowel disease.
Keiichi Mitsuyama, Mikio Niwa, Hidetoshi Takedatsu, Hiroshi Yamasaki, Kotaro Kuwaki, Shinichiro Yoshioka, Ryosuke Yamauchi, Shuhei Fukunaga, Takuji Torimura. World J Gastroenterol 2016
56
5

The First European Evidence-based Consensus on Extra-intestinal Manifestations in Inflammatory Bowel Disease.
Marcus Harbord, Vito Annese, Stephan R Vavricka, Matthieu Allez, Manuel Barreiro-de Acosta, Kirsten Muri Boberg, Johan Burisch, Martine De Vos, Anne-Marie De Vries, Andrew D Dick,[...]. J Crohns Colitis 2016
313
5

The importance of diagnostic accuracy in colonic inflammatory bowel disease.
M Farmer, R E Petras, L E Hunt, J E Janosky, S Galandiuk. Am J Gastroenterol 2000
80
5

Inflammatory bowel disease in a Swedish twin cohort: a long-term follow-up of concordance and clinical characteristics.
Jonas Halfvarson, Lennart Bodin, Curt Tysk, Eva Lindberg, Gunnar Järnerot. Gastroenterology 2003
256
5

A simple classification of Crohn's disease: report of the Working Party for the World Congresses of Gastroenterology, Vienna 1998.
C Gasche, J Scholmerich, J Brynskov, G D'Haens, S B Hanauer, E J Irvine, D P Jewell, D Rachmilewitz, D B Sachar, W J Sandborn,[...]. Inflamm Bowel Dis 2000
915
5


European consensus on the histopathology of inflammatory bowel disease.
F Magro, C Langner, A Driessen, A Ensari, K Geboes, G J Mantzaris, V Villanacci, G Becheanu, P Borralho Nunes, G Cathomas,[...]. J Crohns Colitis 2013
311
5

Immune dysregulation, polyendocrinopathy, enteropathy, X-linked (IPEX) syndrome: A systematic review.
Jae Hyon Park, Keum Hwa Lee, Bokyoung Jeon, Hans D Ochs, Joon Suk Lee, Heon Yung Gee, Seeun Seo, Dongil Geum, Ciriaco A Piccirillo, Michael Eisenhut,[...]. Autoimmun Rev 2020
23
8

X-linked neonatal diabetes mellitus, enteropathy and endocrinopathy syndrome is the human equivalent of mouse scurfy.
R S Wildin, F Ramsdell, J Peake, F Faravelli, J L Casanova, N Buist, E Levy-Lahad, M Mazzella, O Goulet, L Perroni,[...]. Nat Genet 2001
5

Digestive histopathological presentation of IPEX syndrome.
Natacha Patey-Mariaud de Serre, Danielle Canioni, Soléne Ganousse, Frédéric Rieux-Laucat, Olivier Goulet, Frank Ruemmele, Nicole Brousse. Mod Pathol 2009
81
5

Very early-onset inflammatory bowel disease: gaining insight through focused discovery.
Christopher J Moran, Christoph Klein, Aleixo M Muise, Scott B Snapper. Inflamm Bowel Dis 2015
35
5

Clinical similarities and differences of patients with X-linked lymphoproliferative syndrome type 1 (XLP-1/SAP deficiency) versus type 2 (XLP-2/XIAP deficiency).
Jana Pachlopnik Schmid, Danielle Canioni, Despina Moshous, Fabien Touzot, Nizar Mahlaoui, Fabian Hauck, Hirokazu Kanegane, Eduardo Lopez-Granados, Ester Mejstrikova, Isabelle Pellier,[...]. Blood 2011
218
5

Ulcerative colitis in a patient with Wiskott-Aldrich syndrome.
C Folwaczny, C Ruelfs, J Walther, A König, B Emmerich. Endoscopy 2002
21
9

Risk factors associated with progression to intestinal complications of Crohn's disease in a population-based cohort.
Kelvin T Thia, William J Sandborn, William S Harmsen, Alan R Zinsmeister, Edward V Loftus. Gastroenterology 2010
407
5

British Society of Gastroenterology consensus guidelines on the management of inflammatory bowel disease in adults.
Christopher Andrew Lamb, Nicholas A Kennedy, Tim Raine, Philip Anthony Hendy, Philip J Smith, Jimmy K Limdi, Bu'Hussain Hayee, Miranda C E Lomer, Gareth C Parkes, Christian Selinger,[...]. Gut 2019
492
5

Granulocyte-macrophage colony-stimulating factor autoantibodies in murine ileitis and progressive ileal Crohn's disease.
Xiaonan Han, Kanji Uchida, Ingrid Jurickova, Diana Koch, Tara Willson, Charles Samson, Erin Bonkowski, Anna Trauernicht, Mi-Ok Kim, Gitit Tomer,[...]. Gastroenterology 2009
88
5

Laparoscopic ileocaecal resection versus infliximab for terminal ileitis in Crohn's disease: a randomised controlled, open-label, multicentre trial.
Cyriel Y Ponsioen, E Joline de Groof, Emma J Eshuis, Tjibbe J Gardenbroek, Patrick M M Bossuyt, Ailsa Hart, Janindra Warusavitarne, Christianne J Buskens, Ad A van Bodegraven, Menno A Brink,[...]. Lancet Gastroenterol Hepatol 2017
112
5

Proximal Disease Extension in Patients With Limited Ulcerative Colitis: A Danish Population-based Inception Cohort.
Johan Burisch, Ryan Ungaro, Ida Vind, Michelle V Prosberg, Flemming Bendtsen, Jean-Frederic Colombel, Marianne K Vester-Andersen. J Crohns Colitis 2017
21
9

Predictors of Crohn's disease.
Laurent Beaugerie, Philippe Seksik, Isabelle Nion-Larmurier, Jean-Pierre Gendre, Jacques Cosnes. Gastroenterology 2006
612
5

Chronological Order of Appearance of Extraintestinal Manifestations Relative to the Time of IBD Diagnosis in the Swiss Inflammatory Bowel Disease Cohort.
Stephan R Vavricka, Gerhard Rogler, Claudine Gantenbein, Muriel Spoerri, Mareike Prinz Vavricka, Alexander A Navarini, Lars E French, Ekaterina Safroneeva, Nicolas Fournier, Alex Straumann,[...]. Inflamm Bowel Dis 2015
92
5

Ulcerative colitis as a progressive disease: the forgotten evidence.
Joana Torres, Vincent Billioud, David B Sachar, Laurent Peyrin-Biroulet, Jean-Frédéric Colombel. Inflamm Bowel Dis 2012
133
5


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.