A citation-based method for searching scientific literature

Jiyeon Choi, Tongwu Zhang, Andrew Vu, Julien Ablain, Matthew M Makowski, Leandro M Colli, Mai Xu, Rebecca C Hennessey, Jinhu Yin, Harriet Rothschild, Cathrin Gräwe, Michael A Kovacs, Karen M Funderburk, Myriam Brossard, John Taylor, Bogdan Pasaniuc, Raj Chari, Stephen J Chanock, Clive J Hoggart, Florence Demenais, Jennifer H Barrett, Matthew H Law, Mark M Iles, Kai Yu, Michiel Vermeulen, Leonard I Zon, Kevin M Brown. Nat Commun 2020
Times Cited: 25







List of co-cited articles
244 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Treating cancer with microRNA replacement therapy: A literature review.
Nayer Hosseinahli, Mahyar Aghapour, Pascal H G Duijf, Behzad Baradaran. J Cell Physiol 2018
188
4


Endothelial-specific YY1 governs sprouting angiogenesis through directly interacting with RBPJ.
Shuya Zhang, Ji Young Kim, Suowen Xu, Huan Liu, Meimei Yin, Marina Koroleva, Jia Guo, Xiuying Pei, Zheng Gen Jin. Proc Natl Acad Sci U S A 2020
7
14

Targeting autophagy to overcome drug resistance: further developments.
Haocai Chang, Zhengzhi Zou. J Hematol Oncol 2020
37
4

Role of the NFκB-signaling pathway in cancer.
Longzheng Xia, Shiming Tan, Yujuan Zhou, Jingguan Lin, Heran Wang, Linda Oyang, Yutong Tian, Lu Liu, Min Su, Hui Wang,[...]. Onco Targets Ther 2018
146
4

Transcription factor YY1 is essential for regulation of the Th2 cytokine locus and for Th2 cell differentiation.
Soo Seok Hwang, Young Uk Kim, Sumin Lee, Sung Woong Jang, Min Kyung Kim, Byung Hee Koh, Wonyong Lee, Joomyeong Kim, Abdallah Souabni, Meinrad Busslinger,[...]. Proc Natl Acad Sci U S A 2013
52
4

A tumorigenic subpopulation with stem cell properties in melanomas.
Dong Fang, Thiennga K Nguyen, Kim Leishear, Rena Finko, Angela N Kulp, Susan Hotz, Patricia A Van Belle, Xiaowei Xu, David E Elder, Meenhard Herlyn. Cancer Res 2005
950
4


Regulatory T cells: mechanisms of differentiation and function.
Steven Z Josefowicz, Li-Fan Lu, Alexander Y Rudensky. Annu Rev Immunol 2012
4

YY1 inhibits differentiation and function of regulatory T cells by blocking Foxp3 expression and activity.
Soo Seok Hwang, Sung Woong Jang, Min Kyung Kim, Lark Kyun Kim, Bong-Sung Kim, Hyeong Su Kim, Kiwan Kim, Wonyong Lee, Richard A Flavell, Gap Ryol Lee. Nat Commun 2016
33
4

Everything you have ever wanted to know about Yin Yang 1......
Y Shi, J S Lee, K M Galvin. Biochim Biophys Acta 1997
388
4

Identification of clustered YY1 binding sites in imprinting control regions.
Jeong Do Kim, Angela K Hinz, Anne Bergmann, Jennifer M Huang, Ivan Ovcharenko, Lisa Stubbs, Joomyeong Kim. Genome Res 2006
69
4

European consensus-based interdisciplinary guideline for melanoma. Part 1: Diagnostics - Update 2019.
Claus Garbe, Teresa Amaral, Ketty Peris, Axel Hauschild, Petr Arenberger, Lars Bastholt, Veronique Bataille, Veronique Del Marmol, Brigitte Dréno, Maria Concetta Fargnoli,[...]. Eur J Cancer 2020
76
4

Acquired resistance to BRAF inhibitors mediated by a RAF kinase switch in melanoma can be overcome by cotargeting MEK and IGF-1R/PI3K.
Jessie Villanueva, Adina Vultur, John T Lee, Rajasekharan Somasundaram, Mizuho Fukunaga-Kalabis, Angela K Cipolla, Bradley Wubbenhorst, Xiaowei Xu, Phyllis A Gimotty, Damien Kee,[...]. Cancer Cell 2010
949
4

Inhibition of the transcription factor Yin Yang 1 activity by S-nitrosation.
Fumiya Hongo, Hermes Garban, Sara Huerta-Yepez, Mario Vega, Ali R Jazirehi, Yoichi Mizutani, Tsuneharu Miki, Benjamin Bonavida. Biochem Biophys Res Commun 2005
62
4

VEGF and the quest for tumour angiogenesis factors.
Napoleone Ferrara. Nat Rev Cancer 2002
4



Beyond MITF: Multiple transcription factors directly regulate the cellular phenotype in melanocytes and melanoma.
Hannah E Seberg, Eric Van Otterloo, Robert A Cornell. Pigment Cell Melanoma Res 2017
51
4

Endothelial specific YY1 deletion restricts tumor angiogenesis and tumor growth.
Huan Liu, Yikai Qiu, Xiuying Pei, Ramamurthy Chitteti, Rebbeca Steiner, Shuya Zhang, Zheng Gen Jin. Sci Rep 2020
4
25


Sorafenib treatment of metastatic melanoma with c-Kit aberration reduces tumor growth and promotes survival.
Tomoya Takeda, Masanobu Tsubaki, Natsuki Kato, Shuji Genno, Eri Ichimura, Aya Enomoto, Motohiro Imano, Takao Satou, Shozo Nishida. Oncol Lett 2021
2
50

MicroRNA-9 up-regulates E-cadherin through inhibition of NF-κB1-Snail1 pathway in melanoma.
Shujing Liu, Suresh M Kumar, Hezhe Lu, Aihua Liu, Ruifeng Yang, Anitha Pushparajan, Wei Guo, Xiaowei Xu. J Pathol 2012
125
4

Sox2 is dispensable for primary melanoma and metastasis formation.
S M Schaefer, C Segalada, P F Cheng, M Bonalli, V Parfejevs, M P Levesque, R Dummer, S K Nicolis, L Sommer. Oncogene 2017
23
4

Roles Played by YY1 in Embryonic, Adult and Cancer Stem Cells.
Gustavo Ulises Martinez-Ruiz, Abigail Morales-Sanchez, Angel Francisco Pacheco-Hernandez. Stem Cell Rev Rep 2021
5
20

YY1 plays an essential role at all stages of B-cell differentiation.
Eden Kleiman, Haiqun Jia, Salvatore Loguercio, Andrew I Su, Ann J Feeney. Proc Natl Acad Sci U S A 2016
51
4


The ever-expanding role of HIF in tumour and stromal biology.
Edward L LaGory, Amato J Giaccia. Nat Cell Biol 2016
232
4

Long non-coding RNAs in neurodevelopmental disorders.
Ilse I G M van de Vondervoort, Peter M Gordebeke, Nima Khoshab, Paul H E Tiesinga, Jan K Buitelaar, Tamas Kozicz, Armaz Aschrafi, Jeffrey C Glennon. Front Mol Neurosci 2013
47
4

Long Non-coding RNA in Neuronal Development and Neurological Disorders.
Ling Li, Yingliang Zhuang, Xingsen Zhao, Xuekun Li. Front Genet 2019
36
4

What Are 3' UTRs Doing?
Christine Mayr. Cold Spring Harb Perspect Biol 2019
115
4

CRISPR-Cas9 In Vivo Gene Editing for Transthyretin Amyloidosis.
Julian D Gillmore, Ed Gane, Jorg Taubel, Justin Kao, Marianna Fontana, Michael L Maitland, Jessica Seitzer, Daniel O'Connell, Kathryn R Walsh, Kristy Wood,[...]. N Engl J Med 2021
246
4

Familial Dysautonomia: Mechanisms and Models.
Paula Dietrich, Ioannis Dragatsis. Genet Mol Biol 2016
21
4

Dysregulation of the long non-coding RNA transcriptome in a Rett syndrome mouse model.
Paolo Petazzi, Juan Sandoval, Karolina Szczesna, Olga C Jorge, Laura Roa, Sergi Sayols, Antonio Gomez, Dori Huertas, Manel Esteller. RNA Biol 2013
53
4



Functional interrogation of HOXA9 regulome in MLLr leukemia via reporter-based CRISPR/Cas9 screen.
Hao Zhang, Yang Zhang, Xinyue Zhou, Shaela Wright, Judith Hyle, Lianzhong Zhao, Jie An, Xujie Zhao, Ying Shao, Beisi Xu,[...]. Elife 2020
10
10

Aberrant expression of long noncoding RNAs in autistic brain.
Mark N Ziats, Owen M Rennert. J Mol Neurosci 2013
143
4

Global analysis of protein folding using massively parallel design, synthesis, and testing.
Gabriel J Rocklin, Tamuka M Chidyausiku, Inna Goreshnik, Alex Ford, Scott Houliston, Alexander Lemak, Lauren Carter, Rashmi Ravichandran, Vikram K Mulligan, Aaron Chevalier,[...]. Science 2017
192
4

Deciphering eukaryotic gene-regulatory logic with 100 million random promoters.
Carl G de Boer, Eeshit Dhaval Vaishnav, Ronen Sadeh, Esteban Luis Abeyta, Nir Friedman, Aviv Regev. Nat Biotechnol 2020
65
4

Role of RNA modifications in brain and behavior.
Y Jung, D Goldman. Genes Brain Behav 2018
31
4

In utero exposure to valproic acid and autism--a current review of clinical and animal studies.
Florence I Roullet, Jonathan K Y Lai, Jane A Foster. Neurotoxicol Teratol 2013
247
4

Genomic Patterns of De Novo Mutation in Simplex Autism.
Tychele N Turner, Bradley P Coe, Diane E Dickel, Kendra Hoekzema, Bradley J Nelson, Michael C Zody, Zev N Kronenberg, Fereydoun Hormozdiari, Archana Raja, Len A Pennacchio,[...]. Cell 2017
169
4

Neuronal and glial 3D chromatin architecture informs the cellular etiology of brain disorders.
Benxia Hu, Hyejung Won, Won Mah, Royce B Park, Bibi Kassim, Keeley Spiess, Alexey Kozlenkov, Cheynna A Crowley, Sirisha Pochareddy, Yun Li,[...]. Nat Commun 2021
12
8

Whole genome sequencing and variant discovery in the ASPIRE autism spectrum disorder cohort.
Daniel Benjamin Callaghan, Sanja Rogic, Powell Patrick Cheng Tan, Kristina Calli, Ying Qiao, Robert Baldwin, Matthew Jacobson, Manuel Belmadani, Nathan Holmes, Chang Yu,[...]. Clin Genet 2019
11
9

Neurobiological functions of transcriptional enhancers.
Alex S Nord, Anne E West. Nat Neurosci 2020
32
4

STARR-seq and UMI-STARR-seq: Assessing Enhancer Activities for Genome-Wide-, High-, and Low-Complexity Candidate Libraries.
Christoph Neumayr, Michaela Pagani, Alexander Stark, Cosmas D Arnold. Curr Protoc Mol Biol 2019
14
7

Regulatory landscape in brain development and disease.
Keeley Spiess, Hyejung Won. Curr Opin Genet Dev 2020
3
33

Deciphering regulatory DNA sequences and noncoding genetic variants using neural network models of massively parallel reporter assays.
Rajiv Movva, Peyton Greenside, Georgi K Marinov, Surag Nair, Avanti Shrikumar, Anshul Kundaje. PLoS One 2019
28
4

Cell-type-specific effects of genetic variation on chromatin accessibility during human neuronal differentiation.
Dan Liang, Angela L Elwell, Nil Aygün, Oleh Krupa, Justin M Wolter, Felix A Kyere, Michael J Lafferty, Kerry E Cheek, Kenan P Courtney, Marianna Yusupova,[...]. Nat Neurosci 2021
9
11


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.