A citation-based method for searching scientific literature

Yan Xu, Takako Mizuno, Anusha Sridharan, Yina Du, Minzhe Guo, Jie Tang, Kathryn A Wikenheiser-Brokamp, Anne-Karina T Perl, Vincent A Funari, Jason J Gokey, Barry R Stripp, Jeffrey A Whitsett. JCI Insight 2016
Times Cited: 249







List of co-cited articles
1149 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Notch signaling controls the balance of ciliated and secretory cell fates in developing airways.
Po-Nien Tsao, Michelle Vasconcelos, Konstantin I Izvolsky, Jun Qian, Jining Lu, Wellington V Cardoso. Development 2009
233
4

Transcription factor TBX4 regulates myofibroblast accumulation and lung fibrosis.
Ting Xie, Jiurong Liang, Ningshan Liu, Caijuan Huan, Yanli Zhang, Weijia Liu, Maya Kumar, Rui Xiao, Jeanine D'Armiento, Daniel Metzger,[...]. J Clin Invest 2016
54
7

Metformin induces lipogenic differentiation in myofibroblasts to reverse lung fibrosis.
Vahid Kheirollahi, Roxana M Wasnick, Valentina Biasin, Ana Ivonne Vazquez-Armendariz, Xuran Chu, Alena Moiseenko, Astrid Weiss, Jochen Wilhelm, Jin-San Zhang, Grazyna Kwapiszewska,[...]. Nat Commun 2019
63
6

Alveogenesis failure in PDGF-A-deficient mice is coupled to lack of distal spreading of alveolar smooth muscle cell progenitors during lung development.
P Lindahl, L Karlsson, M Hellström, S Gebre-Medhin, K Willetts, J K Heath, C Betsholtz. Development 1997
261
4

Insufficient autophagy in idiopathic pulmonary fibrosis.
Jun Araya, Jun Kojima, Naoki Takasaka, Saburo Ito, Satoko Fujii, Hiromichi Hara, Haruhiko Yanagisawa, Kenji Kobayashi, Chikako Tsurushige, Makoto Kawaishi,[...]. Am J Physiol Lung Cell Mol Physiol 2013
170
4

Alveolar Epithelial Type II Cells as Drivers of Lung Fibrosis in Idiopathic Pulmonary Fibrosis.
Tanyalak Parimon, Changfu Yao, Barry R Stripp, Paul W Noble, Peter Chen. Int J Mol Sci 2020
43
9

An Official ATS/ERS/JRS/ALAT Clinical Practice Guideline: Treatment of Idiopathic Pulmonary Fibrosis. An Update of the 2011 Clinical Practice Guideline.
Ganesh Raghu, Bram Rochwerg, Yuan Zhang, Carlos A Cuello Garcia, Arata Azuma, Juergen Behr, Jan L Brozek, Harold R Collard, William Cunningham, Sakae Homma,[...]. Am J Respir Crit Care Med 2015
940
4


Three-dimensional characterization of fibroblast foci in idiopathic pulmonary fibrosis.
Mark G Jones, Aurélie Fabre, Philipp Schneider, Francesco Cinetto, Giacomo Sgalla, Mark Mavrogordato, Sanjay Jogai, Aiman Alzetani, Ben G Marshall, Katherine M A O'Reilly,[...]. JCI Insight 2016
40
10


Essential role for the ATG4B protease and autophagy in bleomycin-induced pulmonary fibrosis.
Sandra Cabrera, Mariana Maciel, Iliana Herrera, Teresa Nava, Fabián Vergara, Miguel Gaxiola, Carlos López-Otín, Moisés Selman, Annie Pardo. Autophagy 2015
82
4

The mTORC1/4E-BP1 axis represents a critical signaling node during fibrogenesis.
Hannah V Woodcock, Jessica D Eley, Delphine Guillotin, Manuela Platé, Carmel B Nanthakumar, Matteo Martufi, Simon Peace, Gerard Joberty, Daniel Poeckel, Robert B Good,[...]. Nat Commun 2019
59
6

Mode of action of nintedanib in the treatment of idiopathic pulmonary fibrosis.
Lutz Wollin, Eva Wex, Alexander Pautsch, Gisela Schnapp, Katrin E Hostettler, Susanne Stowasser, Martin Kolb. Eur Respir J 2015
332
4

A prospective, non-randomized, no placebo-controlled, phase Ib clinical trial to study the safety of the adipose derived stromal cells-stromal vascular fraction in idiopathic pulmonary fibrosis.
Argyris Tzouvelekis, Vassilis Paspaliaris, George Koliakos, Paschalis Ntolios, Evangelos Bouros, Anastasia Oikonomou, Athanassios Zissimopoulos, Nikolaos Boussios, Brian Dardzinski, Dimitrios Gritzalis,[...]. J Transl Med 2013
147
4

Senescence of Alveolar Type 2 Cells Drives Progressive Pulmonary Fibrosis.
Changfu Yao, Xiangrong Guan, Gianni Carraro, Tanyalak Parimon, Xue Liu, Guanling Huang, Apoorva Mulay, Harmik J Soukiasian, Gregory David, Stephen S Weigt,[...]. Am J Respir Crit Care Med 2021
23
17

A Single-Cell Atlas of the Human Healthy Airways.
Marie Deprez, Laure-Emmanuelle Zaragosi, Marin Truchi, Christophe Becavin, Sandra Ruiz García, Marie-Jeanne Arguel, Magali Plaisant, Virginie Magnone, Kevin Lebrigand, Sophie Abelanet,[...]. Am J Respir Crit Care Med 2020
42
9

Translating Basic Research into Safe and Effective Cell-based Treatments for Respiratory Diseases.
Laertis Ikonomou, Darcy E Wagner, Leigh Turner, Daniel J Weiss. Ann Am Thorac Soc 2019
12
33

Inflammatory Signals Induce AT2 Cell-Derived Damage-Associated Transient Progenitors that Mediate Alveolar Regeneration.
Jinwook Choi, Jong-Eun Park, Georgia Tsagkogeorga, Motoko Yanagita, Bon-Kyoung Koo, Namshik Han, Joo-Hyeon Lee. Cell Stem Cell 2020
43
9

Three-Dimensional Human Alveolar Stem Cell Culture Models Reveal Infection Response to SARS-CoV-2.
Jeonghwan Youk, Taewoo Kim, Kelly V Evans, Young-Il Jeong, Yongsuk Hur, Seon Pyo Hong, Je Hyoung Kim, Kijong Yi, Su Yeon Kim, Kwon Joong Na,[...]. Cell Stem Cell 2020
54
7

Efficacy of simtuzumab versus placebo in patients with idiopathic pulmonary fibrosis: a randomised, double-blind, controlled, phase 2 trial.
Ganesh Raghu, Kevin K Brown, Harold R Collard, Vincent Cottin, Kevin F Gibson, Robert J Kaner, David J Lederer, Fernando J Martinez, Paul W Noble, Jin Woo Song,[...]. Lancet Respir Med 2017
113
4

Randomized, Double-Blind, Placebo-Controlled, Phase 2 Trial of BMS-986020, a Lysophosphatidic Acid Receptor Antagonist for the Treatment of Idiopathic Pulmonary Fibrosis.
Scott M Palmer, Laurie Snyder, Jamie L Todd, Benjamin Soule, Rose Christian, Kevin Anstrom, Yi Luo, Robert Gagnon, Glenn Rosen. Chest 2018
53
7

Shared and distinct mechanisms of fibrosis.
Jörg H W Distler, Andrea-Hermina Györfi, Meera Ramanujam, Michael L Whitfield, Melanie Königshoff, Robert Lafyatis. Nat Rev Rheumatol 2019
104
4

Fibroblasts in fibrosis: novel roles and mediators.
Ryan T Kendall, Carol A Feghali-Bostwick. Front Pharmacol 2014
384
4

The bleomycin animal model: a useful tool to investigate treatment options for idiopathic pulmonary fibrosis?
Antje Moeller, Kjetil Ask, David Warburton, Jack Gauldie, Martin Kolb. Int J Biochem Cell Biol 2008
557
4

Chronic WNT/β-catenin signaling induces cellular senescence in lung epithelial cells.
Mareike Lehmann, Qianjiang Hu, Yan Hu, Kathrin Hafner, Rita Costa, Anastasia van den Berg, Melanie Königshoff. Cell Signal 2020
27
14

Safety, tolerability, pharmacokinetics, and pharmacodynamics of GLPG1690, a novel autotaxin inhibitor, to treat idiopathic pulmonary fibrosis (FLORA): a phase 2a randomised placebo-controlled trial.
Toby M Maher, Ellen M van der Aar, Olivier Van de Steen, Lisa Allamassey, Julie Desrivot, Sonia Dupont, Liesbeth Fagard, Paul Ford, Ann Fieuw, Wim Wuyts. Lancet Respir Med 2018
99
4

Abnormal lung aging in chronic obstructive pulmonary disease and idiopathic pulmonary fibrosis.
Rosa Faner, Mauricio Rojas, William Macnee, Alvar Agustí. Am J Respir Crit Care Med 2012
153
4

The human airway epithelial basal cell transcriptome.
Neil R Hackett, Renat Shaykhiev, Matthew S Walters, Rui Wang, Rachel K Zwick, Barbara Ferris, Bradley Witover, Jacqueline Salit, Ronald G Crystal. PLoS One 2011
135
3

ROCK inhibitor and feeder cells induce the conditional reprogramming of epithelial cells.
Xuefeng Liu, Virginie Ory, Sandra Chapman, Hang Yuan, Chris Albanese, Bhaskar Kallakury, Olga A Timofeeva, Caitlin Nealon, Aleksandra Dakic, Vera Simic,[...]. Am J Pathol 2012
467
3

A survey of best practices for RNA-seq data analysis.
Ana Conesa, Pedro Madrigal, Sonia Tarazona, David Gomez-Cabrero, Alejandra Cervera, Andrew McPherson, Michał Wojciech Szcześniak, Daniel J Gaffney, Laura L Elo, Xuegong Zhang,[...]. Genome Biol 2016
912
3

limma powers differential expression analyses for RNA-sequencing and microarray studies.
Matthew E Ritchie, Belinda Phipson, Di Wu, Yifang Hu, Charity W Law, Wei Shi, Gordon K Smyth. Nucleic Acids Res 2015
3

Biobanking and cryopreservation of human lung explants for omic analysis.
Sarah G Chu, Sergio Poli De Frias, Yuichi Sakairi, Rachel S Kelly, Robert Chase, Kazuhisa Konishi, Ashley Blau, Ellen Tsai, Konstantin Tsoyi, Robert F Padera,[...]. Eur Respir J 2020
6
50

Phenotype molding of stromal cells in the lung tumor microenvironment.
Diether Lambrechts, Els Wauters, Bram Boeckx, Sara Aibar, David Nittner, Oliver Burton, Ayse Bassez, Herbert Decaluwé, Andreas Pircher, Kathleen Van den Eynde,[...]. Nat Med 2018
413
3

RNA-sequencing across three matched tissues reveals shared and tissue-specific gene expression and pathway signatures of COPD.
Jarrett D Morrow, Robert P Chase, Margaret M Parker, Kimberly Glass, Minseok Seo, Miguel Divo, Caroline A Owen, Peter Castaldi, Dawn L DeMeo, Edwin K Silverman,[...]. Respir Res 2019
18
16

Human lung branching morphogenesis is orchestrated by the spatiotemporal distribution of ACTA2, SOX2, and SOX9.
Soula Danopoulos, Irving Alonso, Matthew E Thornton, Brendan H Grubbs, Saverio Bellusci, David Warburton, Denise Al Alam. Am J Physiol Lung Cell Mol Physiol 2018
37
8

Spatial-Temporal Lineage Restrictions of Embryonic p63+ Progenitors Establish Distinct Stem Cell Pools in Adult Airways.
Ying Yang, Paul Riccio, Michael Schotsaert, Munemasa Mori, Jining Lu, Dong-Kee Lee, Adolfo García-Sastre, Jianming Xu, Wellington V Cardoso. Dev Cell 2018
68
4

Fgf10-Hippo Epithelial-Mesenchymal Crosstalk Maintains and Recruits Lung Basal Stem Cells.
Thomas Volckaert, Tingting Yuan, Cho-Ming Chao, Harold Bell, Alina Sitaula, Luisa Szimmtenings, Elie El Agha, Diptiman Chanda, Susan Majka, Saverio Bellusci,[...]. Dev Cell 2017
56
5

Effect of pirfenidone on proliferation, TGF-β-induced myofibroblast differentiation and fibrogenic activity of primary human lung fibroblasts.
Enrico Conte, Elisa Gili, Evelina Fagone, Mary Fruciano, Maria Iemmolo, Carlo Vancheri. Eur J Pharm Sci 2014
163
3

MUC5B and Idiopathic Pulmonary Fibrosis.
Ivana V Yang, Tasha E Fingerlin, Christopher M Evans, Marvin I Schwarz, David A Schwartz. Ann Am Thorac Soc 2015
31
9


Impact of Transcriptomics on Our Understanding of Pulmonary Fibrosis.
Milica Vukmirovic, Naftali Kaminski. Front Med (Lausanne) 2018
20
15

Targeting normal and cancer senescent cells as a strategy of senotherapy.
Ewa Sikora, Anna Bielak-Zmijewska, Grazyna Mosieniak. Ageing Res Rev 2019
24
12

Loss of PTEN induces lung fibrosis via alveolar epithelial cell senescence depending on NF-κB activation.
Yaqiong Tian, Hui Li, Ting Qiu, Jinghong Dai, Yingwei Zhang, Jingyu Chen, Hourong Cai. Aging Cell 2019
40
7

Epigenetic regulation of miR-17~92 contributes to the pathogenesis of pulmonary fibrosis.
Duaa Dakhlallah, Kara Batte, Yijie Wang, Carmen Z Cantemir-Stone, Pearlly Yan, Gerard Nuovo, Adel Mikhail, Charles L Hitchcock, Valerie P Wright, S Patrick Nana-Sinkam,[...]. Am J Respir Crit Care Med 2013
172
3

The Oncogene ECT2 Contributes to a Hyperplastic, Proliferative Lung Epithelial Cell Phenotype in Idiopathic Pulmonary Fibrosis.
Henrik M Ulke, Kathrin Mutze, Mareike Lehmann, Darcy E Wagner, Katharina Heinzelmann, Andreas Günther, Oliver Eickelberg, Melanie Königshoff. Am J Respir Cell Mol Biol 2019
7
42

Inhibition and role of let-7d in idiopathic pulmonary fibrosis.
Kusum V Pandit, David Corcoran, Hanadie Yousef, Manohar Yarlagadda, Argyris Tzouvelekis, Kevin F Gibson, Kazuhisa Konishi, Samuel A Yousem, Mandal Singh, Daniel Handley,[...]. Am J Respir Crit Care Med 2010
357
3

Role of matrix metalloproteinases in the pathogenesis of idiopathic pulmonary fibrosis.
Annie Pardo, Sandra Cabrera, Mariel Maldonado, Moisés Selman. Respir Res 2016
118
3

Type II alveolar epithelial cells and interstitial fibroblasts express connective tissue growth factor in IPF.
L H Pan, K Yamauchi, M Uzuki, T Nakanishi, M Takigawa, H Inoue, T Sawai. Eur Respir J 2001
140
3

Influenza Virus Infects Epithelial Stem/Progenitor Cells of the Distal Lung: Impact on Fgfr2b-Driven Epithelial Repair.
Jennifer Quantius, Carole Schmoldt, Ana I Vazquez-Armendariz, Christin Becker, Elie El Agha, Jochen Wilhelm, Rory E Morty, István Vadász, Konstantin Mayer, Stefan Gattenloehner,[...]. PLoS Pathog 2016
65
4

Short telomere length in IPF lung associates with fibrotic lesions and predicts survival.
Reinier Snetselaar, Aernoud A van Batenburg, Matthijs F M van Oosterhout, Karin M Kazemier, Suzan M Roothaan, Ton Peeters, Joanne J van der Vis, Roel Goldschmeding, Jan C Grutters, Coline H M van Moorsel. PLoS One 2017
47
6


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.