A citation-based method for searching scientific literature

Nissim Arish, Dmytro Petukhov, Shulamit B Wallach-Dayan. Int J Mol Sci 2019
Times Cited: 14







List of co-cited articles
146 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Pirfenidone for idiopathic pulmonary fibrosis: analysis of pooled data from three multinational phase 3 trials.
Paul W Noble, Carlo Albera, Williamson Z Bradford, Ulrich Costabel, Roland M du Bois, Elizabeth A Fagan, Robert S Fishman, Ian Glaspole, Marilyn K Glassberg, Lisa Lancaster,[...]. Eur Respir J 2016
199
7

Endoplasmic reticulum stress in alveolar epithelial cells is prominent in IPF: association with altered surfactant protein processing and herpesvirus infection.
William E Lawson, Peter F Crossno, Vasiliy V Polosukhin, Juan Roldan, Dong-Sheng Cheng, Kirk B Lane, Thomas R Blackwell, Carol Xu, Cheryl Markin, Lorraine B Ware,[...]. Am J Physiol Lung Cell Mol Physiol 2008
284
7

Alteration in the Wnt microenvironment directly regulates molecular events leading to pulmonary senescence.
Tamas Kovacs, Veronika Csongei, Diana Feller, David Ernszt, Gabor Smuk, Veronika Sarosi, Laszlo Jakab, Krisztian Kvell, Domokos Bartis, Judit E Pongracz. Aging Cell 2014
25
7

Molecular mechanisms of cell death: recommendations of the Nomenclature Committee on Cell Death 2018.
Lorenzo Galluzzi, Ilio Vitale, Stuart A Aaronson, John M Abrams, Dieter Adam, Patrizia Agostinis, Emad S Alnemri, Lucia Altucci, Ivano Amelio, David W Andrews,[...]. Cell Death Differ 2018
7

Severe lung fibrosis requires an invasive fibroblast phenotype regulated by hyaluronan and CD44.
Yuejuan Li, Dianhua Jiang, Jiurong Liang, Eric B Meltzer, Alice Gray, Riu Miura, Lise Wogensen, Yu Yamaguchi, Paul W Noble. J Exp Med 2011
233
7

The involvement of Fas-Fas ligand pathway in fibrosing lung diseases.
K Kuwano, H Miyazaki, N Hagimoto, M Kawasaki, M Fujita, R Kunitake, Y Kaneko, N Hara. Am J Respir Cell Mol Biol 1999
140
7

The Hedgehog target Gli1 is not required for bleomycin-induced lung fibrosis.
Matthias C Kugler, Ting-An Yie, Yi Cai, Jennifer Z Berger, Cynthia A Loomis, John S Munger. Exp Lung Res 2019
5
20

Aging and Pulmonary Fibrosis.
Moisés Selman, Ivette Buendía-Roldán, Annie Pardo. Rev Invest Clin 2016
25
7

Augmentation of functional prostaglandin E levels on the respiratory epithelial surface by aerosol administration of prostaglandin E.
Z Borok, A Gillissen, R Buhl, R F Hoyt, R C Hubbard, T Ozaki, S I Rennard, R G Crystal. Am Rev Respir Dis 1991
110
7

Alveolar type 2 progenitor cells for lung injury repair.
Ayobami Matthew Olajuyin, Xiaoju Zhang, Hong-Long Ji. Cell Death Discov 2019
43
7

New insights into the mechanism of notch signalling in fibrosis.
Niloufar Kavian, Amélie Servettaz, Bernard Weill, Frédéric Batteux. Open Rheumatol J 2012
39
7


Double-blind, placebo-controlled trial of pirfenidone in patients with idiopathic pulmonary fibrosis.
Arata Azuma, Toshihiro Nukiwa, Eiyasu Tsuboi, Moritaka Suga, Shosaku Abe, Koichiro Nakata, Yoshio Taguchi, Sonoko Nagai, Harumi Itoh, Motoharu Ohi,[...]. Am J Respir Crit Care Med 2005
617
7

TAZ interacts with TTF-1 and regulates expression of surfactant protein-C.
Kwon-Sik Park, Jeffrey A Whitsett, Tina Di Palma, Jeong-Ho Hong, Michael B Yaffe, Mariastella Zannini. J Biol Chem 2004
133
7


The proteostasis network and its decline in ageing.
Mark S Hipp, Prasad Kasturi, F Ulrich Hartl. Nat Rev Mol Cell Biol 2019
261
7

Single-cell connectomic analysis of adult mammalian lungs.
Micha Sam Brickman Raredon, Taylor Sterling Adams, Yasir Suhail, Jonas Christian Schupp, Sergio Poli, Nir Neumark, Katherine L Leiby, Allison Marie Greaney, Yifan Yuan, Corey Horien,[...]. Sci Adv 2019
48
7

Smoking-induced gene expression changes in the bronchial airway are reflected in nasal and buccal epithelium.
Sriram Sridhar, Frank Schembri, Julie Zeskind, Vishal Shah, Adam M Gustafson, Katrina Steiling, Gang Liu, Yves-Martine Dumas, Xiaohui Zhang, Jerome S Brody,[...]. BMC Genomics 2008
151
7

Expression of the developmental Sonic hedgehog (Shh) signalling pathway is up-regulated in chronic lung fibrosis and the Shh receptor patched 1 is present in circulating T lymphocytes.
Gareth A Stewart, Gerard F Hoyne, Sharon A Ahmad, Elizabeth Jarman, William A H Wallace, David J Harrison, Christopher Haslett, Jonathan R Lamb, Sarah E M Howie. J Pathol 2003
85
7

Distinct DNA methylomes of newborns and centenarians.
Holger Heyn, Ning Li, Humberto J Ferreira, Sebastian Moran, David G Pisano, Antonio Gomez, Javier Diez, Jose V Sanchez-Mut, Fernando Setien, F Javier Carmona,[...]. Proc Natl Acad Sci U S A 2012
455
7

Increasing global mortality from idiopathic pulmonary fibrosis in the twenty-first century.
John P Hutchinson, Tricia M McKeever, Andrew W Fogarty, Vidya Navaratnam, Richard B Hubbard. Ann Am Thorac Soc 2014
101
7

Augmented Wnt signaling in a mammalian model of accelerated aging.
Hongjun Liu, Maria M Fergusson, Rogerio M Castilho, Jie Liu, Liu Cao, Jichun Chen, Daniela Malide, Ilsa I Rovira, Daniel Schimel, Calvin J Kuo,[...]. Science 2007
516
7

Safety, tolerability and appropriate use of nintedanib in idiopathic pulmonary fibrosis.
Tamera Corte, Francesco Bonella, Bruno Crestani, Maurits G Demedts, Luca Richeldi, Carl Coeck, Katy Pelling, Manuel Quaresma, Joseph A Lasky. Respir Res 2015
70
7

Evidence of type II pneumocyte apoptosis in the pathogenesis of idiopathic pulmonary fibrosis (IFP)/usual interstitial pneumonia (UIP).
J V Barbas-Filho, M A Ferreira, A Sesso, R A Kairalla, C R Carvalho, V L Capelozzi. J Clin Pathol 2001
157
7

Alveolar type II cells inhibit fibroblast proliferation: role of IL-1alpha.
Joshua Portnoy, Tianli Pan, Charles A Dinarello, John M Shannon, Jay Y Westcott, Lening Zhang, Robert J Mason. Am J Physiol Lung Cell Mol Physiol 2006
17
7

Notch and Senescence.
Matthew Hoare, Masashi Narita. Adv Exp Med Biol 2018
5
20

Role of Sonic Hedgehog in idiopathic pulmonary fibrosis.
Alfredo Lozano Bolaños, Criselda Mendoza Milla, José Cisneros Lira, Remedios Ramírez, Marco Checa, Lourdes Barrera, Jorge García-Alvarez, Verónica Carbajal, Carina Becerril, Miguel Gaxiola,[...]. Am J Physiol Lung Cell Mol Physiol 2012
93
7

YAP/TAZ incorporation in the β-catenin destruction complex orchestrates the Wnt response.
Luca Azzolin, Tito Panciera, Sandra Soligo, Elena Enzo, Silvio Bicciato, Sirio Dupont, Silvia Bresolin, Chiara Frasson, Giuseppe Basso, Vincenza Guzzardo,[...]. Cell 2014
599
7

Latent herpesvirus infection augments experimental pulmonary fibrosis.
Kevin M Vannella, Tracy R Luckhardt, Carol A Wilke, Linda F van Dyk, Galen B Toews, Bethany B Moore. Am J Respir Crit Care Med 2010
58
7

Mechanistic links between aging and lung fibrosis.
Victor J Thannickal. Biogerontology 2013
73
7

SIEGE: Smoking Induced Epithelial Gene Expression Database.
Vishal Shah, Sriram Sridhar, Jennifer Beane, Jerome S Brody, Avrum Spira. Nucleic Acids Res 2005
19
7

YAP is essential for mechanical force production and epithelial cell proliferation during lung branching morphogenesis.
Chuwen Lin, Erica Yao, Kuan Zhang, Xuan Jiang, Stacey Croll, Katherine Thompson-Peer, Pao-Tien Chuang. Elife 2017
56
7

Epithelial-macrophage interactions determine pulmonary fibrosis susceptibility in Hermansky-Pudlak syndrome.
Lisa R Young, Peter M Gulleman, Chelsi W Short, Harikrishna Tanjore, Taylor Sherrill, Aidong Qi, Andrew P McBride, Rinat Zaynagetdinov, John T Benjamin, William E Lawson,[...]. JCI Insight 2016
42
7

Abrogation of bleomycin-induced epithelial apoptosis and lung fibrosis by captopril or by a caspase inhibitor.
R Wang, O Ibarra-Sunga, L Verlinski, R Pick, B D Uhal. Am J Physiol Lung Cell Mol Physiol 2000
186
7

Loss-of-function mutations in the RNA biogenesis factor NAF1 predispose to pulmonary fibrosis-emphysema.
Susan E Stanley, Dustin L Gable, Christa L Wagner, Thomas M Carlile, Vidya Sagar Hanumanthu, Joshua D Podlevsky, Sara E Khalil, Amy E DeZern, Maria F Rojas-Duran, Carolyn D Applegate,[...]. Sci Transl Med 2016
99
7

Shedding light on the cell biology of extracellular vesicles.
Guillaume van Niel, Gisela D'Angelo, Graça Raposo. Nat Rev Mol Cell Biol 2018
7

Prostaglandin E2 synthesis and suppression of fibroblast proliferation by alveolar epithelial cells is cyclooxygenase-2-dependent.
Vibha Lama, Bethany B Moore, Paul Christensen, Galen B Toews, Marc Peters-Golden. Am J Respir Cell Mol Biol 2002
119
7

Epigenetic differences arise during the lifetime of monozygotic twins.
Mario F Fraga, Esteban Ballestar, Maria F Paz, Santiago Ropero, Fernando Setien, Maria L Ballestar, Damia Heine-Suñer, Juan C Cigudosa, Miguel Urioste, Javier Benitez,[...]. Proc Natl Acad Sci U S A 2005
7

Mitochondria in lung disease.
Suzanne M Cloonan, Augustine M K Choi. J Clin Invest 2016
114
7

Epithelial cell alpha3beta1 integrin links beta-catenin and Smad signaling to promote myofibroblast formation and pulmonary fibrosis.
Kevin K Kim, Ying Wei, Charles Szekeres, Matthias C Kugler, Paul J Wolters, Marla L Hill, James A Frank, Alexis N Brumwell, Sarah E Wheeler, Jordan A Kreidberg,[...]. J Clin Invest 2009
307
7

Emergence of a Wave of Wnt Signaling that Regulates Lung Alveologenesis by Controlling Epithelial Self-Renewal and Differentiation.
David B Frank, Tien Peng, Jarod A Zepp, Melinda Snitow, Tiffaney L Vincent, Ian J Penkala, Zheng Cui, Michael J Herriges, Michael P Morley, Su Zhou,[...]. Cell Rep 2016
99
7

Distal airway stem cells yield alveoli in vitro and during lung regeneration following H1N1 influenza infection.
Pooja A Kumar, Yuanyu Hu, Yusuke Yamamoto, Neo Boon Hoe, Tay Seok Wei, Dakai Mu, Yan Sun, Lim Siew Joo, Rania Dagher, Elisabeth M Zielonka,[...]. Cell 2011
341
7

Murine gammaherpes virus as a cofactor in the development of pulmonary fibrosis in bleomycin resistant mice.
S S Lok, Y Haider, D Howell, J P Stewart, P S Hasleton, J J Egan. Eur Respir J 2002
59
7

Inactivation of nuclear histone deacetylases by EP300 disrupts the MiCEE complex in idiopathic pulmonary fibrosis.
Karla Rubio, Indrabahadur Singh, Stephanie Dobersch, Pouya Sarvari, Stefan Günther, Julio Cordero, Aditi Mehta, Lukasz Wujak, Hector Cabrera-Fuentes, Cho-Ming Chao,[...]. Nat Commun 2019
21
7

Differential epithelial expression of SHH and FOXF1 in usual and nonspecific interstitial pneumonia.
David R Coon, Drucilla J Roberts, Maria Loscertales, Richard Kradin. Exp Mol Pathol 2006
30
7

TAZ is required for lung alveolar epithelial cell differentiation after injury.
Tianhe Sun, Zhiyu Huang, Hua Zhang, Clara Posner, Guiquan Jia, Thirumalai R Ramalingam, Min Xu, Hans Brightbill, Jackson G Egen, Anwesha Dey,[...]. JCI Insight 2019
21
7

The integrin alpha v beta 6 binds and activates latent TGF beta 1: a mechanism for regulating pulmonary inflammation and fibrosis.
J S Munger, X Huang, H Kawakatsu, M J Griffiths, S L Dalton, J Wu, J F Pittet, N Kaminski, C Garat, M A Matthay,[...]. Cell 1999
7

Active epithelial Hippo signaling in idiopathic pulmonary fibrosis.
Jason J Gokey, Anusha Sridharan, Yan Xu, Jenna Green, Gianni Carraro, Barry R Stripp, Anne-Karina T Perl, Jeffrey A Whitsett. JCI Insight 2018
55
7

Heterozygous RTEL1 mutations are associated with familial pulmonary fibrosis.
Caroline Kannengiesser, Raphael Borie, Christelle Ménard, Marion Réocreux, Patrick Nitschké, Steven Gazal, Hervé Mal, Camille Taillé, Jacques Cadranel, Hilario Nunes,[...]. Eur Respir J 2015
86
7

Extensive phenotyping of individuals at risk for familial interstitial pneumonia reveals clues to the pathogenesis of interstitial lung disease.
Jonathan A Kropski, Jason M Pritchett, Donald F Zoz, Peter F Crossno, Cheryl Markin, Errine T Garnett, Amber L Degryse, Daphne B Mitchell, Vasiliy V Polosukhin, Otis B Rickman,[...]. Am J Respir Crit Care Med 2015
92
7


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.