A citation-based method for searching scientific literature

Benjamin Pardo, Stéphane Marcand. EMBO J 2005
Times Cited: 119







List of co-cited articles
1278 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Antigenic variation in clones of animal-infective Trypanosoma brucei derived and maintained in vitro.
J J Doyle, H Hirumi, K Hirumi, E N Lupton, G A Cross. Parasitology 1980
89
1




A yeast-endonuclease-generated DNA break induces antigenic switching in Trypanosoma brucei.
Catharine E Boothroyd, Oliver Dreesen, Tatyana Leonova, K Ina Ly, Luisa M Figueiredo, George A M Cross, F Nina Papavasiliou. Nature 2009
97
1

Microhomology-mediated end joining: Good, bad and ugly.
Ja-Hwan Seol, Eun Yong Shim, Sang Eun Lee. Mutat Res 2018
85
1

Variant surface glycoprotein RNA interference triggers a precytokinesis cell cycle arrest in African trypanosomes.
Karen Sheader, Sue Vaughan, James Minchin, Katie Hughes, Keith Gull, Gloria Rudenko. Proc Natl Acad Sci U S A 2005
88
1


Facioscapulohumeral muscular dystrophy.
Silvère M van der Maarel, Rune R Frants, George W Padberg. Biochim Biophys Acta 2007
56
1


Functional characterization of the TERRA transcriptome at damaged telomeres.
Antonio Porro, Sascha Feuerhahn, Julien Delafontaine, Harold Riethman, Jacques Rougemont, Joachim Lingner. Nat Commun 2014
135
1

SIRT6 is required for maintenance of telomere position effect in human cells.
Ruth I Tennen, Dennis J Bua, Woodring E Wright, Katrin F Chua. Nat Commun 2011
84
1

Trypanosomal histone γH2A and the DNA damage response.
Lucy Glover, David Horn. Mol Biochem Parasitol 2012
60
1

Telomeres in ICF syndrome cells are vulnerable to DNA damage due to elevated DNA:RNA hybrids.
Shira Sagie, Shir Toubiana, Stella R Hartono, Hagar Katzir, Aya Tzur-Gilat, Shany Havazelet, Claire Francastel, Guillaume Velasco, Frédéric Chédin, Sara Selig. Nat Commun 2017
54
1

Trypanosoma brucei ribonuclease H2A is an essential R-loop processing enzyme whose loss causes DNA damage during transcription initiation and antigenic variation.
Emma Briggs, Kathryn Crouch, Leandro Lemgruber, Graham Hamilton, Craig Lapsley, Richard McCulloch. Nucleic Acids Res 2019
11
9

Ku heterodimer-independent end joining in Trypanosoma brucei cell extracts relies upon sequence microhomology.
Peter Burton, David J McBride, Jonathan M Wilkes, J David Barry, Richard McCulloch. Eukaryot Cell 2007
42
2


Gene arrays at Pneumocystis carinii telomeres.
Scott P Keely, Hubert Renauld, Ann E Wakefield, Melanie T Cushion, A George Smulian, Nigel Fosker, Audrey Fraser, David Harris, Lee Murphy, Claire Price,[...]. Genetics 2005
52
1

Exploring TERRA during Leishmania major developmental cycle and continuous in vitro passages.
Edna Gicela Ortiz Morea, Elton Jose Rosas Vasconcelos, Cristiane de Santis Alves, Selma Giorgio, Peter J Myler, Helio Langoni, Claus Maria Azzalin, Maria Isabel Nogueira Cano. Int J Biol Macromol 2021
2
50


Variation in the major surface glycoprotein genes in Pneumocystis jirovecii.
Geetha Kutty, Frank Maldarelli, Guillaume Achaz, Joseph A Kovacs. J Infect Dis 2008
36
2

Ribonuclease H1-targeted R-loops in surface antigen gene expression sites can direct trypanosome immune evasion.
Emma Briggs, Kathryn Crouch, Leandro Lemgruber, Craig Lapsley, Richard McCulloch. PLoS Genet 2018
22
4

Telomere-binding proteins Taz1 and Rap1 regulate DSB repair and suppress gross chromosomal rearrangements in fission yeast.
Hiroyuki Irie, Io Yamamoto, Yusuke Tarumoto, Sanki Tashiro, Kurt W Runge, Fuyuki Ishikawa. PLoS Genet 2019
3
33

TERRA regulate the transcriptional landscape of pluripotent cells through TRF1-dependent recruitment of PRC2.
Rosa María Marión, Juan J Montero, Isabel López de Silanes, Osvaldo Graña-Castro, Paula Martínez, Stefan Schoeftner, José Alejandro Palacios-Fábrega, Maria A Blasco. Elife 2019
17
5

R Loops: From Physiological to Pathological Roles.
Tatiana García-Muse, Andrés Aguilera. Cell 2019
121
1


Chromosome End Repair and Genome Stability in Plasmodium falciparum.
Susannah F Calhoun, Jake Reed, Noah Alexander, Christopher E Mason, Kirk W Deitsch, Laura A Kirkman. mBio 2017
12
8


Genetic basis of mycotoxin susceptibility differences between budding yeast isolates.
Xtopher Quispe, Sebastián M Tapia, Carlos Villarroel, Christian Oporto, Valentina Abarca, Verónica García, Claudio Martínez, Francisco A Cubillos. Sci Rep 2017
5
20

Telomere and Subtelomere R-loops and Antigenic Variation in Trypanosomes.
Arpita Saha, Vishal P Nanavaty, Bibo Li. J Mol Biol 2020
8
12


9q34.3 microduplications lead to neurodevelopmental disorders through EHMT1 overexpression.
Maria Teresa Bonati, Chiara Castronovo, Alessandra Sironi, Dario Zimbalatti, Ilaria Bestetti, Milena Crippa, Antonio Novelli, Sara Loddo, Maria Lisa Dentici, Juliet Taylor,[...]. Neurogenetics 2019
6
16


Mammalian polymerase θ promotes alternative NHEJ and suppresses recombination.
Pedro A Mateos-Gomez, Fade Gong, Nidhi Nair, Kyle M Miller, Eros Lazzerini-Denchi, Agnel Sfeir. Nature 2015
333
1

ADAR1 RNA editing enzyme regulates R-loop formation and genome stability at telomeres in cancer cells.
Yusuke Shiromoto, Masayuki Sakurai, Moeko Minakuchi, Kentaro Ariyoshi, Kazuko Nishikura. Nat Commun 2021
3
33

Histone H3 Variant Regulates RNA Polymerase II Transcription Termination and Dual Strand Transcription of siRNA Loci in Trypanosoma brucei.
David Reynolds, Brigitte T Hofmeister, Laura Cliffe, Magdy Alabady, T Nicolai Siegel, Robert J Schmitz, Robert Sabatini. PLoS Genet 2016
24
4

The dark side of RNA:DNA hybrids.
Alessandra Brambati, Luca Zardoni, Eleonora Nardini, Achille Pellicioli, Giordano Liberi. Mutat Res Rev Mutat Res 2020
12
8

Human subtelomeric duplicon structure and organization.
Anthony Ambrosini, Sheila Paul, Sufen Hu, Harold Riethman. Genome Biol 2007
38
2

The phosphoproteome of bloodstream form Trypanosoma brucei, causative agent of African sleeping sickness.
Isabelle R E Nett, David M A Martin, Diego Miranda-Saavedra, Douglas Lamont, Jonathan D Barber, Angela Mehlert, Michael A J Ferguson. Mol Cell Proteomics 2009
116
1

High-throughput single-molecule mapping links subtelomeric variants and long-range haplotypes with specific telomeres.
Eleanor Young, Steven Pastor, Ramakrishnan Rajagopalan, Jennifer McCaffrey, Justin Sibert, Angel C Y Mak, Pui-Yan Kwok, Harold Riethman, Ming Xiao. Nucleic Acids Res 2017
14
7


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.