A citation-based method for searching scientific literature

Jayakrishnan Nandakumar, Caitlin F Bell, Ina Weidenfeld, Arthur J Zaug, Leslie A Leinwand, Thomas R Cech. Nature 2012
Times Cited: 197







List of co-cited articles
1487 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Replication by human DNA polymerase-iota occurs by Hoogsteen base-pairing.
Deepak T Nair, Robert E Johnson, Satya Prakash, Louise Prakash, Aneel K Aggarwal. Nature 2004
233
1

Conformation-independent structural comparison of macromolecules with ProSMART.
Robert A Nicholls, Marcus Fischer, Stuart McNicholas, Garib N Murshudov. Acta Crystallogr D Biol Crystallogr 2014
97
1



Characterisation of molecular motions in cryo-EM single-particle data by multi-body refinement in RELION.
Takanori Nakane, Dari Kimanius, Erik Lindahl, Sjors Hw Scheres. Elife 2018
158
1

De novo computational RNA modeling into cryo-EM maps of large ribonucleoprotein complexes.
Kalli Kappel, Shiheng Liu, Kevin P Larsen, Georgios Skiniotis, Elisabetta Viani Puglisi, Joseph D Puglisi, Z Hong Zhou, Rui Zhao, Rhiju Das. Nat Methods 2018
17
5

Tools for macromolecular model building and refinement into electron cryo-microscopy reconstructions.
Alan Brown, Fei Long, Robert A Nicholls, Jaan Toots, Paul Emsley, Garib Murshudov. Acta Crystallogr D Biol Crystallogr 2015
313
1

Solvent mediated interactions in the structure of the nucleosome core particle at 1.9 a resolution.
Curt A Davey, David F Sargent, Karolin Luger, Armin W Maeder, Timothy J Richmond. J Mol Biol 2002
944
1

EMAN2: an extensible image processing suite for electron microscopy.
Guang Tang, Liwei Peng, Philip R Baldwin, Deepinder S Mann, Wen Jiang, Ian Rees, Steven J Ludtke. J Struct Biol 2007
1


BALBES: a molecular-replacement pipeline.
Fei Long, Alexei A Vagin, Paul Young, Garib N Murshudov. Acta Crystallogr D Biol Crystallogr 2008
569
1

Telomere fusions associate with coding sequence and copy number alterations in CLL.
Laura Escudero, Kez Cleal, Kevin Ashelford, Chris Fegan, Chris Pepper, Kate Liddiard, Duncan M Baird. Leukemia 2019
4
25

Telomeres: history, health, and hallmarks of aging.
Deepavali Chakravarti, Kyle A LaBella, Ronald A DePinho. Cell 2021
6
16

Telomerase activity in melanocytic lesions: A potential marker of tumor biology.
P Rudolph, C Schubert, S Tamm, K Heidorn, A Hauschild, I Michalska, S Majewski, G Krupp, S Jablonska, R Parwaresch. Am J Pathol 2000
59
1

Analyzing CRISPR genome-editing experiments with CRISPResso.
Luca Pinello, Matthew C Canver, Megan D Hoban, Stuart H Orkin, Donald B Kohn, Daniel E Bauer, Guo-Cheng Yuan. Nat Biotechnol 2016
205
1

Short telomeres are associated with genetic complexity, high-risk genomic aberrations, and short survival in chronic lymphocytic leukemia.
Göran Roos, Alexander Kröber, Pawel Grabowski, Dirk Kienle, Andreas Bühler, Hartmut Döhner, Richard Rosenquist, Stephan Stilgenbauer. Blood 2008
97
1

Telomere length is an independent predictor of survival, treatment requirement and Richter's syndrome transformation in chronic lymphocytic leukemia.
D Rossi, C Lobetti Bodoni, E Genuardi, L Monitillo, D Drandi, M Cerri, C Deambrogi, I Ricca, A Rocci, S Ferrero,[...]. Leukemia 2009
75
1

Telomere length and telomerase activity delineate distinctive replicative features of the B-CLL subgroups defined by immunoglobulin V gene mutations.
Rajendra N Damle, Franak M Batliwalla, Fabio Ghiotto, Angelo Valetto, Emilia Albesiano, Cristina Sison, Steven L Allen, Jonathan Kolitz, Vincent P Vinciguerra, Prasad Kudalkar,[...]. Blood 2004
130
1

Selection-free genome editing of the sickle mutation in human adult hematopoietic stem/progenitor cells.
Mark A DeWitt, Wendy Magis, Nicolas L Bray, Tianjiao Wang, Jennifer R Berman, Fabrizia Urbinati, Seok-Jin Heo, Therese Mitros, Denise P Muñoz, Dario Boffelli,[...]. Sci Transl Med 2016
226
1

Nonirradiated NOD,B6.SCID Il2rγ-/- Kit(W41/W41) (NBSGW) mice support multilineage engraftment of human hematopoietic cells.
Brian E McIntosh, Matthew E Brown, Bret M Duffin, John P Maufort, David T Vereide, Igor I Slukvin, James A Thomson. Stem Cell Reports 2015
90
1

Cancer-associated POT1 mutations lead to telomere elongation without induction of a DNA damage response.
Won-Tae Kim, Kelsey Hennick, Joshua Johnson, Brendan Finnerty, Seunga Choo, Sarah B Short, Casey Drubin, Ryan Forster, Mary L McMaster, Dirk Hockemeyer. EMBO J 2021
1
100

Functional genomics, proteomics, and regulatory DNA analysis in isogenic settings using zinc finger nuclease-driven transgenesis into a safe harbor locus in the human genome.
Russell C DeKelver, Vivian M Choi, Erica A Moehle, David E Paschon, Dirk Hockemeyer, Sebastiaan H Meijsing, Yasemin Sancak, Xiaoxia Cui, Eveline J Steine, Jeffrey C Miller,[...]. Genome Res 2010
207
1

Ex vivo generation of fully mature human red blood cells from hematopoietic stem cells.
Marie-Catherine Giarratana, Ladan Kobari, Hélène Lapillonne, David Chalmers, Laurent Kiger, Thérèse Cynober, Michael C Marden, Henri Wajcman, Luc Douay. Nat Biotechnol 2005
363
1

Gene editing in human stem cells using zinc finger nucleases and integrase-defective lentiviral vector delivery.
Angelo Lombardo, Pietro Genovese, Christian M Beausejour, Silvia Colleoni, Ya-Li Lee, Kenneth A Kim, Dale Ando, Fyodor D Urnov, Cesare Galli, Philip D Gregory,[...]. Nat Biotechnol 2007
614
1

Telomere length set point regulation in human pluripotent stem cells critically depends on the shelterin protein TPP1.
John M Boyle, Kelsey M Hennick, Samuel G Regalado, Jacob M Vogan, Xiaozhu Zhang, Kathleen Collins, Dirk Hockemeyer. Mol Biol Cell 2020
1
100

Replication stress conferred by POT1 dysfunction promotes telomere relocalization to the nuclear pore.
Alexandra M Pinzaru, Mike Kareh, Noa Lamm, Eros Lazzerini-Denchi, Anthony J Cesare, Agnel Sfeir. Genes Dev 2020
3
33


Targeted gene addition in human CD34(+) hematopoietic cells for correction of X-linked chronic granulomatous disease.
Suk See De Ravin, Andreas Reik, Pei-Qi Liu, Linhong Li, Xiaolin Wu, Ling Su, Castle Raley, Narda Theobald, Uimook Choi, Alexander H Song,[...]. Nat Biotechnol 2016
118
1

Scalable web services for the PSIPRED Protein Analysis Workbench.
Daniel W A Buchan, Federico Minneci, Tim C O Nugent, Kevin Bryson, David T Jones. Nucleic Acids Res 2013
880
1


Impaired telomere maintenance in Alazami syndrome patients with LARP7 deficiency.
Brody Holohan, Wanil Kim, Tsung-Po Lai, Hirotoshi Hoshiyama, Ning Zhang, Anas M Alazami, Woodring E Wright, M Stephen Meyn, Fowzan S Alkuraya, Jerry W Shay. BMC Genomics 2016
16
6

Stringent control of the RNA-dependent RNA polymerase translocation revealed by multiple intermediate structures.
Meihua Wang, Rui Li, Bo Shu, Xuping Jing, Han-Qing Ye, Peng Gong. Nat Commun 2020
7
14

RNA purification by preparative polyacrylamide gel electrophoresis.
Alexey Petrov, Tinghe Wu, Elisabetta Viani Puglisi, Joseph D Puglisi. Methods Enzymol 2013
28
3

The Phyre2 web portal for protein modeling, prediction and analysis.
Lawrence A Kelley, Stefans Mezulis, Christopher M Yates, Mark N Wass, Michael J E Sternberg. Nat Protoc 2015
1

A structurally conserved human and Tetrahymena telomerase catalytic core.
Yaqiang Wang, Marcus Gallagher-Jones, Lukas Sušac, He Song, Juli Feigon. Proc Natl Acad Sci U S A 2020
2
50

Quality-Control Mechanism for Telomerase RNA Folding in the Cell.
Xichan Hu, Jin-Kwang Kim, Clinton Yu, Hyun-Ik Jun, Jinqiang Liu, Banumathi Sankaran, Lan Huang, Feng Qiao. Cell Rep 2020
1
100

COBALT: constraint-based alignment tool for multiple protein sequences.
Jason S Papadopoulos, Richa Agarwala. Bioinformatics 2007
557
1

Structural analysis reveals conformational plasticity in the recognition of RNA 3' ends by the human La protein.
Olga Kotik-Kogan, Elizabeth R Valentine, Domenico Sanfelice, Maria R Conte, Stephen Curry. Structure 2008
56
1

Telomerase expression in human somatic cells does not induce changes associated with a transformed phenotype.
X R Jiang, G Jimenez, E Chang, M Frolkis, B Kusler, M Sage, M Beeche, A G Bodnar, G M Wahl, T D Tlsty,[...]. Nat Genet 1999
504
1

Structure of human telomerase holoenzyme with bound telomeric DNA.
George E Ghanim, Adam J Fountain, Anne-Marie M van Roon, Ramya Rangan, Rhiju Das, Kathleen Collins, Thi Hoang Duong Nguyen. Nature 2021
1
100

Ultrahigh-energy photons up to 1.4 petaelectronvolts from 12 γ-ray Galactic sources.
Zhen Cao, F A Aharonian, Q An, Axikegu, L X Bai, Y X Bai, Y W Bao, D Bastieri, X J Bi, Y J Bi,[...]. Nature 2021
3
33

Structures of telomerase at several steps of telomere repeat synthesis.
Yao He, Yaqiang Wang, Baocheng Liu, Christina Helmling, Lukas Sušac, Ryan Cheng, Z Hong Zhou, Juli Feigon. Nature 2021
1
100



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.