A citation-based method for searching scientific literature

Gregory M Williams, Vasileios Paschalis, Janice Ortega, Frederick W Muskett, James T Hodgkinson, Guo-Min Li, John W R Schwabe, Robert S Lahue. Proc Natl Acad Sci U S A 2020
Times Cited: 9







List of co-cited articles
132 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


dCas9-based epigenome editing suggests acquisition of histone methylation is not sufficient for target gene repression.
Henriette O'Geen, Chonghua Ren, Charles M Nicolet, Andrew A Perez, Julian Halmai, Victoria M Le, Joel P Mackay, Peggy J Farnham, David J Segal. Nucleic Acids Res 2017
81
11

Regulation of alternative splicing through coupling with transcription and chromatin structure.
Shiran Naftelberg, Ignacio E Schor, Gil Ast, Alberto R Kornblihtt. Annu Rev Biochem 2015
256
11

Stella safeguards the oocyte methylome by preventing de novo methylation mediated by DNMT1.
Yingfeng Li, Zhuqiang Zhang, Jiayu Chen, Wenqiang Liu, Weiyi Lai, Baodong Liu, Xiang Li, Liping Liu, Shaohua Xu, Qiang Dong,[...]. Nature 2018
92
11

Modifiers of CAG/CTG Repeat Instability: Insights from Mammalian Models.
Vanessa C Wheeler, Vincent Dion. J Huntingtons Dis 2021
17
11

DNMT1 deficiency triggers mismatch repair defects in human cells through depletion of repair protein levels in a process involving the DNA damage response.
Jayne E P Loughery, Philip D Dunne, Karla M O'Neill, Richard R Meehan, Jennifer R McDaid, Colum P Walsh. Hum Mol Genet 2011
44
11

QuasR: quantification and annotation of short reads in R.
Dimos Gaidatzis, Anita Lerch, Florian Hahne, Michael B Stadler. Bioinformatics 2015
151
11

HDAC5 is required for maintenance of pericentric heterochromatin, and controls cell-cycle progression and survival of human cancer cells.
P Peixoto, V Castronovo, N Matheus, C Polese, O Peulen, A Gonzalez, M Boxus, E Verdin, M Thiry, F Dequiedt,[...]. Cell Death Differ 2012
44
11

Clearance of damaged mitochondria via mitophagy is important to the protective effect of ischemic preconditioning in kidneys.
Man J Livingston, Jinghong Wang, Jiliang Zhou, Guangyu Wu, Ian G Ganley, Joseph A Hill, Xiao-Ming Yin, Zheng Dong. Autophagy 2019
69
11

Histone deacetylase inhibitor enhances recovery after AKI.
Chiara Cianciolo Cosentino, Nataliya I Skrypnyk, Lauren L Brilli, Takuto Chiba, Tatiana Novitskaya, Clara Woods, James West, Vasiliy N Korotchenko, Lee McDermott, Billy W Day,[...]. J Am Soc Nephrol 2013
120
11


Involvement of the mitochondrial pathway in cold storage and rewarming-associated apoptosis of human renal proximal tubular cells.
Abdulla K Salahudeen, Hong Huang, Manish Joshi, Norman A Moore, John K Jenkins. Am J Transplant 2003
91
11

Mitochondrial quality control in kidney injury and repair.
Chengyuan Tang, Juan Cai, Xiao-Ming Yin, Joel M Weinberg, Manjeri A Venkatachalam, Zheng Dong. Nat Rev Nephrol 2021
35
11

The critical roles of histone deacetylase 3 in the pathogenesis of solid organ injury.
Li Ning, Xiong Rui, Wang Bo, Geng Qing. Cell Death Dis 2021
3
33


Inhibition of histone deacetylase expands the renal progenitor cell population.
Eric D de Groh, Lisa M Swanhart, Chiara Cianciolo Cosentino, Rachel L Jackson, Weixiang Dai, Carolyn A Kitchens, Billy W Day, Thomas E Smithgall, Neil A Hukriede. J Am Soc Nephrol 2010
83
11

Murine renal transplantation procedure.
Jiao-Jing Wang, Sara Hockenheimer, Alice A Bickerstaff, Gregg A Hadley. J Vis Exp 2009
16
11

Cellular maintenance and repair of the kidney.
Jian-Kan Guo, Lloyd G Cantley. Annu Rev Physiol 2010
62
11

Roles of HDAC3-orchestrated circadian clock gene oscillations in diabetic rats following myocardial ischaemia/reperfusion injury.
Zhen Qiu, Hao Ming, Shaoqing Lei, Bin Zhou, Bo Zhao, Yanli Yu, Rui Xue, Zhongyuan Xia. Cell Death Dis 2021
8
12




Renal cold storage followed by transplantation impairs expression of key mitochondrial fission and fusion proteins.
Nirmala Parajuli, Stephen Shrum, Julia Tobacyk, Alex Harb, John M Arthur, Lee Ann MacMillan-Crow. PLoS One 2017
16
11

The Relationship between HDAC3 and Malignant Tumors: A Mini Review.
Lou Tong, Haotian Liang, Huiyu Zhuang, Chongdong Liu, Zhenyu Zhang. Crit Rev Eukaryot Gene Expr 2020
2
50

Regulation of PUMA-alpha by p53 in cisplatin-induced renal cell apoptosis.
M Jiang, Q Wei, J Wang, Q Du, J Yu, L Zhang, Z Dong. Oncogene 2006
164
11

The class 3 PI3K coordinates autophagy and mitochondrial lipid catabolism by controlling nuclear receptor PPARα.
Anton Iershov, Ivan Nemazanyy, Chantal Alkhoury, Muriel Girard, Esther Barth, Nicolas Cagnard, Alexandra Montagner, Dominique Chretien, Elena I Rugarli, Herve Guillou,[...]. Nat Commun 2019
38
11


Valproic acid attenuates acute lung injury induced by ischemia-reperfusion in rats.
Shu-Yu Wu, Shih-En Tang, Fu-Chang Ko, Geng-Chin Wu, Kun-Lun Huang, Shi-Jye Chu. Anesthesiology 2015
45
11

Inhibition of class I histone deacetylases unveils a mitochondrial signature and enhances oxidative metabolism in skeletal muscle and adipose tissue.
Andrea Galmozzi, Nico Mitro, Alessandra Ferrari, Elise Gers, Federica Gilardi, Cristina Godio, Gaia Cermenati, Alice Gualerzi, Elena Donetti, Dante Rotili,[...]. Diabetes 2013
156
11

Protein Kinase C-δ Mediates Kidney Tubular Injury in Cold Storage-Associated Kidney Transplantation.
Jiefu Zhu, Gang Zhang, Zhixia Song, Xiaohong Xiang, Shaoqun Shu, Zhiwen Liu, Danyi Yang, Qingqing Wei, Zheng Dong. J Am Soc Nephrol 2020
7
14

Kidney Injury Molecule-1 (KIM-1): a novel biomarker for human renal proximal tubule injury.
Won K Han, Veronique Bailly, Rekha Abichandani, Ravi Thadhani, Joseph V Bonventre. Kidney Int 2002
11

Each additional hour of cold ischemia time significantly increases the risk of graft failure and mortality following renal transplantation.
Agnes Debout, Yohann Foucher, Katy Trébern-Launay, Christophe Legendre, Henri Kreis, Georges Mourad, Valérie Garrigue, Emmanuel Morelon, Fanny Buron, Lionel Rostaing,[...]. Kidney Int 2015
209
11


Intracellular heterogeneity in mitochondrial membrane potentials revealed by a J-aggregate-forming lipophilic cation JC-1.
S T Smiley, M Reers, C Mottola-Hartshorn, M Lin, A Chen, T W Smith, G D Steele, L B Chen. Proc Natl Acad Sci U S A 1991
11

Delayed kidney graft function: from mechanism to translation.
Bernd Schröppel, Christophe Legendre. Kidney Int 2014
129
11

Valproic acid attenuates proteinuria and kidney injury.
Katrien Van Beneden, Caroline Geers, Marina Pauwels, Inge Mannaerts, Dierik Verbeelen, Leo A van Grunsven, Christiane Van den Branden. J Am Soc Nephrol 2011
89
11


Epigenetic Regulation in Kidney Toxicity: Insights From Cisplatin Nephrotoxicity.
Xiaohong Xiang, Chunyuan Guo, Chengyuan Tang, Juan Cai, Zheng Dong. Semin Nephrol 2019
10
11

Class-specific histone/protein deacetylase inhibition protects against renal ischemia reperfusion injury and fibrosis formation.
M H Levine, Z Wang, T R Bhatti, Y Wang, D D Aufhauser, S McNeal, Y Liu, S Cheraghlou, R Han, L Wang,[...]. Am J Transplant 2015
52
11

Histone deacetylase–mediated silencing of AMWAP expression contributes to cisplatin nephrotoxicity.
Punithavathi Ranganathan, Rania Hamad, Riyaz Mohamed, Calpurnia Jayakumar, Thangaraju Muthusamy, Ganesan Ramesh. Kidney Int 2016
30
11

Role of mitochondrial-derived oxidants in renal tubular cell cold-storage injury.
Tanecia Mitchell, Hamida Saba, Joe Laakman, Nirmala Parajuli, Lee Ann MacMillan-Crow. Free Radic Biol Med 2010
32
11

Histone deacetylase 3 aberration inhibits Klotho transcription and promotes renal fibrosis.
Fang Chen, Qi Gao, Ai Wei, Xingren Chen, Yujun Shi, Hongwei Wang, Wangsen Cao. Cell Death Differ 2021
13
11


Inhibition of HDAC3 Ameliorates Cerebral Ischemia Reperfusion Injury in Diabetic Mice In Vivo and In Vitro.
Bo Zhao, Quan Yuan, Jia-Bao Hou, Zhong-Yuan Xia, Li-Ying Zhan, Mei Li, Meng Jiang, Wen-Wei Gao, Lian Liu. J Diabetes Res 2019
32
11

Histone deacetylase inhibitors protect against cisplatin-induced acute kidney injury by activating autophagy in proximal tubular cells.
Jing Liu, Man J Livingston, Guie Dong, Chengyuan Tang, Yunchao Su, Guangyu Wu, Xiao-Ming Yin, Zheng Dong. Cell Death Dis 2018
47
11

Inhibitors of histone deacetylases suppress cisplatin-induced p53 activation and apoptosis in renal tubular cells.
Guie Dong, Jia Luo, Vijay Kumar, Zheng Dong. Am J Physiol Renal Physiol 2010
52
11

Class I histone deacetylase activity is required for proliferation of renal epithelial cells.
Jinhua Tang, Yanli Yan, Ting C Zhao, George Bayliss, Haidong Yan, Shougang Zhuang. Am J Physiol Renal Physiol 2013
16
11

A mouse model of renal ischemia-reperfusion injury solely induced by cold ischemia.
Jin Wei, Yingliang Wang, Jie Zhang, Lei Wang, Liying Fu, Byeong J Cha, Jacentha Buggs, Ruisheng Liu. Am J Physiol Renal Physiol 2019
7
14

Integrative regulation of physiology by histone deacetylase 3.
Matthew J Emmett, Mitchell A Lazar. Nat Rev Mol Cell Biol 2019
59
11

HDAC3: taking the SMRT-N-CoRrect road to repression.
P Karagianni, J Wong. Oncogene 2007
166
11

Mouse model of ischemic acute kidney injury: technical notes and tricks.
Qingqing Wei, Zheng Dong. Am J Physiol Renal Physiol 2012
159
11


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.