A citation-based method for searching scientific literature

Christoph Stosiek, Olga Garaschuk, Knut Holthoff, Arthur Konnerth. Proc Natl Acad Sci U S A 2003
Times Cited: 808







List of co-cited articles
710 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Simultaneous Multi-plane Imaging of Neural Circuits.
Weijian Yang, Jae-Eun Kang Miller, Luis Carrillo-Reid, Eftychios Pnevmatikakis, Liam Paninski, Rafael Yuste, Darcy S Peterka. Neuron 2016
103
5


A genetically encoded calcium indicator for chronic in vivo two-photon imaging.
Marco Mank, Alexandre Ferrão Santos, Stephan Direnberger, Thomas D Mrsic-Flogel, Sonja B Hofer, Valentin Stein, Thomas Hendel, Dierk F Reiff, Christiaan Levelt, Alexander Borst,[...]. Nat Methods 2008
316
5

All-optical electrophysiology in mammalian neurons using engineered microbial rhodopsins.
Daniel R Hochbaum, Yongxin Zhao, Samouil L Farhi, Nathan Klapoetke, Christopher A Werley, Vikrant Kapoor, Peng Zou, Joel M Kralj, Dougal Maclaurin, Niklas Smedemark-Margulies,[...]. Nat Methods 2014
375
5

Voltage imaging with genetically encoded indicators.
Yongxian Xu, Peng Zou, Adam E Cohen. Curr Opin Chem Biol 2017
78
6

Genetically encoded calcium indicators for multi-color neural activity imaging and combination with optogenetics.
Jasper Akerboom, Nicole Carreras Calderón, Lin Tian, Sebastian Wabnig, Matthias Prigge, Johan Tolö, Andrew Gordus, Michael B Orger, Kristen E Severi, John J Macklin,[...]. Front Mol Neurosci 2013
390
5

Long-term dynamics of CA1 hippocampal place codes.
Yaniv Ziv, Laurie D Burns, Eric D Cocker, Elizabeth O Hamel, Kunal K Ghosh, Lacey J Kitch, Abbas El Gamal, Mark J Schnitzer. Nat Neurosci 2013
430
5

Two-photon calcium imaging of the medial prefrontal cortex and hippocampus without cortical invasion.
Masashi Kondo, Kenta Kobayashi, Masamichi Ohkura, Junichi Nakai, Masanori Matsuzaki. Elife 2017
35
14

Improved deep two-photon calcium imaging in vivo.
Antje Birkner, Carsten H Tischbirek, Arthur Konnerth. Cell Calcium 2017
21
23

Dimensionality reduction for large-scale neural recordings.
John P Cunningham, Byron M Yu. Nat Neurosci 2014
332
5

Measuring and interpreting neuronal correlations.
Marlene R Cohen, Adam Kohn. Nat Neurosci 2011
515
5

High-throughput synapse-resolving two-photon fluorescence microendoscopy for deep-brain volumetric imaging in vivo.
Guanghan Meng, Yajie Liang, Sarah Sarsfield, Wan-Chen Jiang, Rongwen Lu, Joshua Tate Dudman, Yeka Aponte, Na Ji. Elife 2019
33
15

Transgenic mice for intersectional targeting of neural sensors and effectors with high specificity and performance.
Linda Madisen, Aleena R Garner, Daisuke Shimaoka, Amy S Chuong, Nathan C Klapoetke, Lu Li, Alexander van der Bourg, Yusuke Niino, Ladan Egolf, Claudio Monetti,[...]. Neuron 2015
473
5

Sulforhodamine 101 as a specific marker of astroglia in the neocortex in vivo.
Axel Nimmerjahn, Frank Kirchhoff, Jason N D Kerr, Fritjof Helmchen. Nat Methods 2004
552
5

Long-term, high-resolution imaging in the mouse neocortex through a chronic cranial window.
Anthony Holtmaat, Tobias Bonhoeffer, David K Chow, Jyoti Chuckowree, Vincenzo De Paola, Sonja B Hofer, Mark Hübener, Tara Keck, Graham Knott, Wei-Chung A Lee,[...]. Nat Protoc 2009
544
5

Broadly tuned response properties of diverse inhibitory neuron subtypes in mouse visual cortex.
Aaron M Kerlin, Mark L Andermann, Vladimir K Berezovskii, R Clay Reid. Neuron 2010
349
5

Nonlinear magic: multiphoton microscopy in the biosciences.
Warren R Zipfel, Rebecca M Williams, Watt W Webb. Nat Biotechnol 2003
5

Fast two-layer two-photon imaging of neuronal cell populations using an electrically tunable lens.
Benjamin F Grewe, Fabian F Voigt, Marcel van 't Hoff, Fritjof Helmchen. Biomed Opt Express 2011
143
5

Wide field-of-view, multi-region, two-photon imaging of neuronal activity in the mammalian brain.
Jeffrey N Stirman, Ikuko T Smith, Michael W Kudenov, Spencer L Smith. Nat Biotechnol 2016
124
5

Two-Photon Bidirectional Control and Imaging of Neuronal Excitability with High Spatial Resolution In Vivo.
Angelo Forli, Dania Vecchia, Noemi Binini, Francesca Succol, Serena Bovetti, Claudio Moretti, Francesco Nespoli, Mathias Mahn, Christopher A Baker, McLean M Bolton,[...]. Cell Rep 2018
66
7

Simultaneous two-photon imaging and two-photon optogenetics of cortical circuits in three dimensions.
Weijian Yang, Luis Carrillo-Reid, Yuki Bando, Darcy S Peterka, Rafael Yuste. Elife 2018
67
7

Spike inference from calcium imaging using sequential Monte Carlo methods.
Joshua T Vogelstein, Brendon O Watson, Adam M Packer, Rafael Yuste, Bruno Jedynak, Liam Paninski. Biophys J 2009
108
5

Functional imaging of neuronal activity of auditory cortex by using Cal-520 in anesthetized and awake mice.
Jingcheng Li, Jianxiong Zhang, Meng Wang, Junxia Pan, Xiaowei Chen, Xiang Liao. Biomed Opt Express 2017
14
35

Distributed coding of choice, action and engagement across the mouse brain.
Nicholas A Steinmetz, Peter Zatka-Haas, Matteo Carandini, Kenneth D Harris. Nature 2019
109
5

High-speed, miniaturized fluorescence microscopy in freely moving mice.
Benjamin A Flusberg, Axel Nimmerjahn, Eric D Cocker, Eran A Mukamel, Robert P J Barretto, Tony H Ko, Laurie D Burns, Juergen C Jung, Mark J Schnitzer. Nat Methods 2008
213
5

Robustness of Spike Deconvolution for Neuronal Calcium Imaging.
Marius Pachitariu, Carsen Stringer, Kenneth D Harris. J Neurosci 2018
40
12

Cellular level brain imaging in behaving mammals: an engineering approach.
Elizabeth J O Hamel, Benjamin F Grewe, Jones G Parker, Mark J Schnitzer. Neuron 2015
84
4

Reactivation of the same synapses during spontaneous up states and sensory stimuli.
Xiaowei Chen, Nathalie L Rochefort, Bert Sakmann, Arthur Konnerth. Cell Rep 2013
36
11

Linear integration of spine Ca2+ signals in layer 4 cortical neurons in vivo.
Hongbo Jia, Zsuzsanna Varga, Bert Sakmann, Arthur Konnerth. Proc Natl Acad Sci U S A 2014
32
12


Targeted patch-clamp recordings and single-cell electroporation of unlabeled neurons in vivo.
Kazuo Kitamura, Benjamin Judkewitz, Masanobu Kano, Winfried Denk, Michael Häusser. Nat Methods 2008
218
4

A neural circuit for spatial summation in visual cortex.
Hillel Adesnik, William Bruns, Hiroki Taniguchi, Z Josh Huang, Massimo Scanziani. Nature 2012
348
4

Syringe-injectable electronics.
Jia Liu, Tian-Ming Fu, Zengguang Cheng, Guosong Hong, Tao Zhou, Lihua Jin, Madhavi Duvvuri, Zhe Jiang, Peter Kruskal, Chong Xie,[...]. Nat Nanotechnol 2015
235
4


Chronic cellular imaging of entire cortical columns in awake mice using microprisms.
Mark L Andermann, Nathan B Gilfoy, Glenn J Goldey, Robert N S Sachdev, Markus Wölfel, David A McCormick, R Clay Reid, Michael J Levene. Neuron 2013
106
4

High-speed volumetric imaging of neuronal activity in freely moving rodents.
Oliver Skocek, Tobias Nöbauer, Lukas Weilguny, Francisca Martínez Traub, Chuying Naomi Xia, Maxim I Molodtsov, Abhinav Grama, Masahito Yamagata, Daniel Aharoni, David D Cox,[...]. Nat Methods 2018
45
8

A genetically encoded fluorescent acetylcholine indicator for in vitro and in vivo studies.
Miao Jing, Peng Zhang, Guangfu Wang, Jiesi Feng, Lukas Mesik, Jianzhi Zeng, Huoqing Jiang, Shaohua Wang, Jess C Looby, Nick A Guagliardo,[...]. Nat Biotechnol 2018
118
4

Engrams and circuits crucial for systems consolidation of a memory.
Takashi Kitamura, Sachie K Ogawa, Dheeraj S Roy, Teruhiro Okuyama, Mark D Morrissey, Lillian M Smith, Roger L Redondo, Susumu Tonegawa. Science 2017
300
4

Permanent genetic access to transiently active neurons via TRAP: targeted recombination in active populations.
Casey J Guenthner, Kazunari Miyamichi, Helen H Yang, H Craig Heller, Liqun Luo. Neuron 2013
239
4

A Genetically Encoded Fluorescent Sensor Enables Rapid and Specific Detection of Dopamine in Flies, Fish, and Mice.
Fangmiao Sun, Jianzhi Zeng, Miao Jing, Jingheng Zhou, Jiesi Feng, Scott F Owen, Yichen Luo, Funing Li, Huan Wang, Takashi Yamaguchi,[...]. Cell 2018
206
4

Integration of optogenetics with complementary methodologies in systems neuroscience.
Christina K Kim, Avishek Adhikari, Karl Deisseroth. Nat Rev Neurosci 2017
261
4

Simultaneous cellular-resolution optical perturbation and imaging of place cell firing fields.
John Peter Rickgauer, Karl Deisseroth, David W Tank. Nat Neurosci 2014
174
4

LOTOS-based two-photon calcium imaging of dendritic spines in vivo.
Xiaowei Chen, Ulrich Leischner, Zsuzsanna Varga, Hongbo Jia, Diana Deca, Nathalie L Rochefort, Arthur Konnerth. Nat Protoc 2012
40
10

Large-scale recording of neuronal ensembles.
György Buzsáki. Nat Neurosci 2004
852
4

A point process framework for relating neural spiking activity to spiking history, neural ensemble, and extrinsic covariate effects.
Wilson Truccolo, Uri T Eden, Matthew R Fellows, John P Donoghue, Emery N Brown. J Neurophysiol 2005
493
4

Fast nonnegative deconvolution for spike train inference from population calcium imaging.
Joshua T Vogelstein, Adam M Packer, Timothy A Machado, Tanya Sippy, Baktash Babadi, Rafael Yuste, Liam Paninski. J Neurophysiol 2010
205
4

Engineered AAVs for efficient noninvasive gene delivery to the central and peripheral nervous systems.
Ken Y Chan, Min J Jang, Bryan B Yoo, Alon Greenbaum, Namita Ravi, Wei-Li Wu, Luis Sánchez-Guardado, Carlos Lois, Sarkis K Mazmanian, Benjamin E Deverman,[...]. Nat Neurosci 2017
341
4

Time-lapse imaging of disease progression in deep brain areas using fluorescence microendoscopy.
Robert P J Barretto, Tony H Ko, Juergen C Jung, Tammy J Wang, George Capps, Allison C Waters, Yaniv Ziv, Alessio Attardo, Lawrence Recht, Mark J Schnitzer. Nat Med 2011
136
4

A pyramid approach to subpixel registration based on intensity.
P Thévenaz, U E Ruttimann, M Unser. IEEE Trans Image Process 1998
4

Functional specialization of mouse higher visual cortical areas.
Mark L Andermann, Aaron M Kerlin, Demetris K Roumis, Lindsey L Glickfeld, R Clay Reid. Neuron 2011
230
4


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.