A citation-based method for searching scientific literature

Antonio Porro, Sascha Feuerhahn, Joachim Lingner. Cell Rep 2014
Times Cited: 77







List of co-cited articles
1075 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression.
Ahmad M Khalil, Mitchell Guttman, Maite Huarte, Manuel Garber, Arjun Raj, Dianali Rivea Morales, Kelly Thomas, Aviva Presser, Bradley E Bernstein, Alexander van Oudenaarden,[...]. Proc Natl Acad Sci U S A 2009
11

Long noncoding RNA MALAT1 controls cell cycle progression by regulating the expression of oncogenic transcription factor B-MYB.
Vidisha Tripathi, Zhen Shen, Arindam Chakraborty, Sumanprava Giri, Susan M Freier, Xiaolin Wu, Yongqing Zhang, Myriam Gorospe, Supriya G Prasanth, Ashish Lal,[...]. PLoS Genet 2013
473
11

Functional demarcation of active and silent chromatin domains in human HOX loci by noncoding RNAs.
John L Rinn, Michael Kertesz, Jordon K Wang, Sharon L Squazzo, Xiao Xu, Samantha A Brugmann, L Henry Goodnough, Jill A Helms, Peggy J Farnham, Eran Segal,[...]. Cell 2007
11

A two-step mechanism for TRF2-mediated chromosome-end protection.
Keiji Okamoto, Cristina Bartocci, Iliana Ouzounov, Jolene K Diedrich, John R Yates, Eros Lazzerini Denchi. Nature 2013
143
11

TRF2 recruits RTEL1 to telomeres in S phase to promote t-loop unwinding.
Grzegorz Sarek, Jean-Baptiste Vannier, Stephanie Panier, John H J Petrini, Simon J Boulton. Mol Cell 2015
92
11


Regulation of telomere length by G-quadruplex telomere DNA- and TERRA-binding protein TLS/FUS.
Kentaro Takahama, Asami Takada, Shota Tada, Mai Shimizu, Kazutoshi Sayama, Riki Kurokawa, Takanori Oyoshi. Chem Biol 2013
93
10

TERRA, CpG methylation and telomere heterochromatin: lessons from ICF syndrome cells.
Zhong Deng, Amy E Campbell, Paul M Lieberman. Cell Cycle 2010
64
12

Alternative lengthening of telomeres: models, mechanisms and implications.
Anthony J Cesare, Roger R Reddel. Nat Rev Genet 2010
572
10

Purification of proteins associated with specific genomic Loci.
Jérôme Déjardin, Robert E Kingston. Cell 2009
344
10

Loss of ATRX, genome instability, and an altered DNA damage response are hallmarks of the alternative lengthening of telomeres pathway.
Courtney A Lovejoy, Wendi Li, Steven Reisenweber, Supawat Thongthip, Joanne Bruno, Titia de Lange, Saurav De, John H J Petrini, Patricia A Sung, Maria Jasin,[...]. PLoS Genet 2012
347
10

Homologous recombination generates T-loop-sized deletions at human telomeres.
Richard C Wang, Agata Smogorzewska, Titia de Lange. Cell 2004
398
10

The telomeric transcriptome of Schizosaccharomyces pombe.
Amadou Bah, Harry Wischnewski, Vadim Shchepachev, Claus M Azzalin. Nucleic Acids Res 2012
73
10


LSD1 demethylates repressive histone marks to promote androgen-receptor-dependent transcription.
Eric Metzger, Melanie Wissmann, Na Yin, Judith M Müller, Robert Schneider, Antoine H F M Peters, Thomas Günther, Reinhard Buettner, Roland Schüle. Nature 2005
10

Specific association of human telomerase activity with immortal cells and cancer.
N W Kim, M A Piatyszek, K R Prowse, C B Harley, M D West, P L Ho, G M Coviello, W E Wright, S L Weinrich, J W Shay. Science 1994
10

Epigenetic regulation of telomere length in mammalian cells by the Suv39h1 and Suv39h2 histone methyltransferases.
Marta García-Cao, Roderick O'Sullivan, Antoine H F M Peters, Thomas Jenuwein, María A Blasco. Nat Genet 2004
396
10

Telomeric RNAs are essential to maintain telomeres.
Juan José Montero, Isabel López de Silanes, Osvaldo Graña, Maria A Blasco. Nat Commun 2016
54
14

Shelterin-Mediated Telomere Protection.
Titia de Lange. Annu Rev Genet 2018
222
10

Telomeres: protecting chromosomes against genome instability.
Roderick J O'Sullivan, Jan Karlseder. Nat Rev Mol Cell Biol 2010
557
9

Altered telomeres in tumors with ATRX and DAXX mutations.
Christopher M Heaphy, Roeland F de Wilde, Yuchen Jiao, Alison P Klein, Barish H Edil, Chanjuan Shi, Chetan Bettegowda, Fausto J Rodriguez, Charles G Eberhart, Sachidanand Hebbar,[...]. Science 2011
631
9


Telomerase-negative immortalized human cells contain a novel type of promyelocytic leukemia (PML) body.
T R Yeager, A A Neumann, A Englezou, L I Huschtscha, J R Noble, R R Reddel. Cancer Res 1999
498
9

Telomeres: the silence is broken.
Claus M Azzalin, Joachim Lingner. Cell Cycle 2008
77
9

Telomere position effect in human cells.
J A Baur, Y Zou, J W Shay, W E Wright. Science 2001
322
9

DNA methyltransferases control telomere length and telomere recombination in mammalian cells.
Susana Gonzalo, Isabel Jaco, Mario F Fraga, Taiping Chen, En Li, Manel Esteller, María A Blasco. Nat Cell Biol 2006
422
9

53BP1 promotes non-homologous end joining of telomeres by increasing chromatin mobility.
Nadya Dimitrova, Yi-Chun M Chen, David L Spector, Titia de Lange. Nature 2008
403
9

ncRNA- and Pc2 methylation-dependent gene relocation between nuclear structures mediates gene activation programs.
Liuqing Yang, Chunru Lin, Wen Liu, Jie Zhang, Kenneth A Ohgi, Jonathan D Grinstein, Pieter C Dorrestein, Michael G Rosenfeld. Cell 2011
443
9

Long non-coding RNA ANRIL is required for the PRC2 recruitment to and silencing of p15(INK4B) tumor suppressor gene.
Y Kotake, T Nakagawa, K Kitagawa, S Suzuki, N Liu, M Kitagawa, Y Xiong. Oncogene 2011
716
9

The nuclear-retained noncoding RNA MALAT1 regulates alternative splicing by modulating SR splicing factor phosphorylation.
Vidisha Tripathi, Jonathan D Ellis, Zhen Shen, David Y Song, Qun Pan, Andrew T Watt, Susan M Freier, C Frank Bennett, Alok Sharma, Paula A Bubulya,[...]. Mol Cell 2010
9

The N-terminal domains of TRF1 and TRF2 regulate their ability to condense telomeric DNA.
Anaïs Poulet, Sabrina Pisano, Cendrine Faivre-Moskalenko, Bei Pei, Yannick Tauran, Zofia Haftek-Terreau, Frédéric Brunet, Yann-Vaï Le Bihan, Marie-Hélène Ledu, Fabien Montel,[...]. Nucleic Acids Res 2012
47
14

Telomeric DNA damage is irreparable and causes persistent DNA-damage-response activation.
Marzia Fumagalli, Francesca Rossiello, Michela Clerici, Sara Barozzi, Davide Cittaro, Jessica M Kaplunov, Gabriele Bucci, Miryana Dobreva, Valentina Matti, Christian M Beausejour,[...]. Nat Cell Biol 2012
427
9

Isolation of chromatin from dysfunctional telomeres reveals an important role for Ring1b in NHEJ-mediated chromosome fusions.
Cristina Bartocci, Jolene K Diedrich, Iliana Ouzounov, Julia Li, Andrea Piunti, Diego Pasini, John R Yates, Eros Lazzerini Denchi. Cell Rep 2014
33
21

Human telomeres contain two distinct Myb-related proteins, TRF1 and TRF2.
D Broccoli, A Smogorzewska, L Chong, T de Lange. Nat Genet 1997
714
9

Scaffold function of long non-coding RNA HOTAIR in protein ubiquitination.
Je-Hyun Yoon, Kotb Abdelmohsen, Jiyoung Kim, Xiaoling Yang, Jennifer L Martindale, Kumiko Tominaga-Yamanaka, Elizabeth J White, Arturo V Orjalo, John L Rinn, Stefan G Kreft,[...]. Nat Commun 2013
268
9

p53 is regulated by the lysine demethylase LSD1.
Jing Huang, Roopsha Sengupta, Alexsandra B Espejo, Min Gyu Lee, Jean A Dorsey, Mario Richter, Susanne Opravil, Ramin Shiekhattar, Mark T Bedford, Thomas Jenuwein,[...]. Nature 2007
538
9

Regulation of LSD1 histone demethylase activity by its associated factors.
Yu-Jiang Shi, Caitlin Matson, Fei Lan, Shigeki Iwase, Tadashi Baba, Yang Shi. Mol Cell 2005
589
9

The basic N-terminal domain of TRF2 limits recombination endonuclease action at human telomeres.
Adélaïde Saint-Léger, Melanie Koelblen, Livia Civitelli, Amadou Bah, Nadir Djerbi, Marie-Josèphe Giraud-Panis, Arturo Londoño-Vallejo, Fiorentina Ascenzioni, Eric Gilson. Cell Cycle 2014
37
18

Multiple roles for MRE11 at uncapped telomeres.
Yibin Deng, Xiaolan Guo, David O Ferguson, Sandy Chang. Nature 2009
146
9

p53- and ATM-dependent apoptosis induced by telomeres lacking TRF2.
J Karlseder, D Broccoli, Y Dai, S Hardy, T de Lange. Science 1999
839
9

G-quadruplex RNA binding and recognition by the lysine-specific histone demethylase-1 enzyme.
Alexander Hirschi, William J Martin, Zigmund Luka, Lioudmila V Loukachevitch, Nicholas J Reiter. RNA 2016
21
33

Nuclear respiratory factor 1 and endurance exercise promote human telomere transcription.
Aurélie Diman, Joanna Boros, Florian Poulain, Julie Rodriguez, Marin Purnelle, Harikleia Episkopou, Luc Bertrand, Marc Francaux, Louise Deldicque, Anabelle Decottignies. Sci Adv 2016
45
15

Targeting of Polycomb Repressive Complex 2 to RNA by Short Repeats of Consecutive Guanines.
Xueyin Wang, Karen J Goodrich, Anne R Gooding, Haroon Naeem, Stuart Archer, Richard D Paucek, Daniel T Youmans, Thomas R Cech, Chen Davidovich. Mol Cell 2017
96
9

CTCF driven TERRA transcription facilitates completion of telomere DNA replication.
Kate Beishline, Olga Vladimirova, Stephen Tutton, Zhuo Wang, Zhong Deng, Paul M Lieberman. Nat Commun 2017
34
20

TERRA recruitment of polycomb to telomeres is essential for histone trymethylation marks at telomeric heterochromatin.
Juan J Montero, Isabel López-Silanes, Diego Megías, Mario F Fraga, Álvaro Castells-García, Maria A Blasco. Nat Commun 2018
56
12

Telomeres in ICF syndrome cells are vulnerable to DNA damage due to elevated DNA:RNA hybrids.
Shira Sagie, Shir Toubiana, Stella R Hartono, Hagar Katzir, Aya Tzur-Gilat, Shany Havazelet, Claire Francastel, Guillaume Velasco, Frédéric Chédin, Sara Selig. Nat Commun 2017
54
12


Driver mutations in histone H3.3 and chromatin remodelling genes in paediatric glioblastoma.
Jeremy Schwartzentruber, Andrey Korshunov, Xiao-Yang Liu, David T W Jones, Elke Pfaff, Karine Jacob, Dominik Sturm, Adam M Fontebasso, Dong-Anh Khuong Quang, Martje Tönjes,[...]. Nature 2012
7

Position effect at S. cerevisiae telomeres: reversible repression of Pol II transcription.
D E Gottschling, O M Aparicio, B L Billington, V A Zakian. Cell 1990
7

Five dysfunctional telomeres predict onset of senescence in human cells.
Zeenia Kaul, Anthony J Cesare, Lily I Huschtscha, Axel A Neumann, Roger R Reddel. EMBO Rep 2011
122
7


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.