A citation-based method for searching scientific literature

Barbara Treutlein, Ozgun Gokce, Stephen R Quake, Thomas C Südhof. Proc Natl Acad Sci U S A 2014
Times Cited: 157







List of co-cited articles
985 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Neuroligin 2 is exclusively localized to inhibitory synapses.
Frédérique Varoqueaux, Stéphane Jamain, Nils Brose. Eur J Cell Biol 2004
350
10

Neuroligins Sculpt Cerebellar Purkinje-Cell Circuits by Differential Control of Distinct Classes of Synapses.
Bo Zhang, Lulu Y Chen, Xinran Liu, Stephan Maxeiner, Sung-Jin Lee, Ozgun Gokce, Thomas C Südhof. Neuron 2015
78
12

Deletion of α-neurexin II results in autism-related behaviors in mice.
J Dachtler, J Glasper, R N Cohen, J L Ivorra, D J Swiffen, A J Jackson, M K Harte, R J Rodgers, S J Clapcote. Transl Psychiatry 2014
54
18

Neuroligins determine synapse maturation and function.
Frédérique Varoqueaux, Gayane Aramuni, Randi L Rawson, Ralf Mohrmann, Markus Missler, Kurt Gottmann, Weiqi Zhang, Thomas C Südhof, Nils Brose. Neuron 2006
535
10



Unveiling the complexity of the maize transcriptome by single-molecule long-read sequencing.
Bo Wang, Elizabeth Tseng, Michael Regulski, Tyson A Clark, Ting Hon, Yinping Jiao, Zhenyuan Lu, Andrew Olson, Joshua C Stein, Doreen Ware. Nat Commun 2016
242
10

Specification of synaptic connectivity by cell surface interactions.
Joris de Wit, Anirvan Ghosh. Nat Rev Neurosci 2016
179
10

Astrocytes Assemble Thalamocortical Synapses by Bridging NRX1α and NL1 via Hevin.
Sandeep K Singh, Jeff A Stogsdill, Nisha S Pulimood, Hayley Dingsdale, Yong Ho Kim, Louis-Jan Pilaz, Il Hwan Kim, Alex C Manhaes, Wandilson S Rodrigues, Arin Pamukcu,[...]. Cell 2016
145
10

Hybrid error correction and de novo assembly of single-molecule sequencing reads.
Sergey Koren, Michael C Schatz, Brian P Walenz, Jeffrey Martin, Jason T Howard, Ganeshkumar Ganapathy, Zhong Wang, David A Rasko, W Richard McCombie, Erich D Jarvis,[...]. Nat Biotechnol 2012
586
10

Defining a personal, allele-specific, and single-molecule long-read transcriptome.
Hagen Tilgner, Fabian Grubert, Donald Sharon, Michael P Snyder. Proc Natl Acad Sci U S A 2014
122
10

Structural analysis of the synaptic protein neuroligin and its beta-neurexin complex: determinants for folding and cell adhesion.
Igor P Fabrichny, Philippe Leone, Gerlind Sulzenbacher, Davide Comoletti, Meghan T Miller, Palmer Taylor, Yves Bourne, Pascale Marchot. Neuron 2007
117
9

Neuroligin 1 is a postsynaptic cell-adhesion molecule of excitatory synapses.
J Y Song, K Ichtchenko, T C Südhof, N Brose. Proc Natl Acad Sci U S A 1999
484
9

A survey of the sorghum transcriptome using single-molecule long reads.
Salah E Abdel-Ghany, Michael Hamilton, Jennifer L Jacobi, Peter Ngam, Nicholas Devitt, Faye Schilkey, Asa Ben-Hur, Anireddy S N Reddy. Nat Commun 2016
213
9

Dystroglycan binding to α-neurexin competes with neurexophilin-1 and neuroligin in the brain.
Carsten Reissner, Johanna Stahn, Dorothee Breuer, Martin Klose, Gottfried Pohlentz, Michael Mormann, Markus Missler. J Biol Chem 2014
37
24


Comprehensive transcriptome analysis using synthetic long-read sequencing reveals molecular co-association of distant splicing events.
Hagen Tilgner, Fereshteh Jahanbani, Tim Blauwkamp, Ali Moshrefi, Erich Jaeger, Feng Chen, Itamar Harel, Carlos D Bustamante, Morten Rasmussen, Michael P Snyder. Nat Biotechnol 2015
99
9

Truncating mutations in NRXN2 and NRXN1 in autism spectrum disorders and schizophrenia.
Julie Gauthier, Tabrez J Siddiqui, Peng Huashan, Daisaku Yokomaku, Fadi F Hamdan, Nathalie Champagne, Mathieu Lapointe, Dan Spiegelman, Anne Noreau, Ronald G Lafrenière,[...]. Hum Genet 2011
171
9

Activity-induced histone modifications govern Neurexin-1 mRNA splicing and memory preservation.
Xinlu Ding, Sanxiong Liu, Miaomiao Tian, Wenhao Zhang, Tao Zhu, Dongdong Li, Jiawei Wu, HaiTeng Deng, Yichang Jia, Wei Xie,[...]. Nat Neurosci 2017
46
19

Autism-associated neuroligin-3 mutations commonly impair striatal circuits to boost repetitive behaviors.
Patrick E Rothwell, Marc V Fuccillo, Stephan Maxeiner, Scott J Hayton, Ozgun Gokce, Byung Kook Lim, Stephen C Fowler, Robert C Malenka, Thomas C Südhof. Cell 2014
245
8

Neuroligin 2 drives postsynaptic assembly at perisomatic inhibitory synapses through gephyrin and collybistin.
Alexandros Poulopoulos, Gayane Aramuni, Guido Meyer, Tolga Soykan, Mrinalini Hoon, Theofilos Papadopoulos, Mingyue Zhang, Ingo Paarmann, Céline Fuchs, Kirsten Harvey,[...]. Neuron 2009
313
8

LRRTM3 Regulates Excitatory Synapse Development through Alternative Splicing and Neurexin Binding.
Ji Won Um, Tae-Yong Choi, Hyeyeon Kang, Yi Sul Cho, Gayoung Choii, Pavel Uvarov, Dongseok Park, Daun Jeong, Sangmin Jeon, Dongmin Lee,[...]. Cell Rep 2016
41
19

Interaction between autism-linked MDGAs and neuroligins suppresses inhibitory synapse development.
Katherine L Pettem, Daisaku Yokomaku, Hideto Takahashi, Yuan Ge, Ann Marie Craig. J Cell Biol 2013
88
9


The neurexin ligands, neuroligins and leucine-rich repeat transmembrane proteins, perform convergent and divergent synaptic functions in vivo.
Gilberto J Soler-Llavina, Marc V Fuccillo, Jaewon Ko, Thomas C Südhof, Robert C Malenka. Proc Natl Acad Sci U S A 2011
95
8

Transsynaptic signaling by activity-dependent cleavage of neuroligin-1.
Rui T Peixoto, Portia A Kunz, Hyungbae Kwon, Angela M Mabb, Bernardo L Sabatini, Benjamin D Philpot, Michael D Ehlers. Neuron 2012
145
8

Activity-dependent proteolytic cleavage of neuroligin-1.
Kunimichi Suzuki, Yukari Hayashi, Soichiro Nakahara, Hiroshi Kumazaki, Johannes Prox, Keisuke Horiuchi, Mingshuo Zeng, Shun Tanimura, Yoshitake Nishiyama, Satoko Osawa,[...]. Neuron 2012
129
8

Neurexin mediates the assembly of presynaptic terminals.
Camin Dean, Francisco G Scholl, Jenny Choih, Shannon DeMaria, James Berger, Ehud Isacoff, Peter Scheiffele. Nat Neurosci 2003
425
8

Conserved domain structure of beta-neurexins. Unusual cleaved signal sequences in receptor-like neuronal cell-surface proteins.
Y A Ushkaryov, Y Hata, K Ichtchenko, C Moomaw, S Afendis, C A Slaughter, T C Südhof. J Biol Chem 1994
126
8

Splice form dependence of beta-neurexin/neuroligin binding interactions.
Jesko Koehnke, Phinikoula S Katsamba, Goran Ahlsen, Fabiana Bahna, Jeremie Vendome, Barry Honig, Lawrence Shapiro, Xiangshu Jin. Neuron 2010
65
12


Neurexins 1-3 Each Have a Distinct Pattern of Expression in the Early Developing Human Cerebral Cortex.
Lauren F Harkin, Susan J Lindsay, Yaobo Xu, Ayman Alzu'bi, Alexandra Ferrara, Emily A Gullon, Owen G James, Gavin J Clowry. Cereb Cortex 2017
27
29

Phenotypic characterization of nonsocial behavioral impairment in neurexin 1α knockout rats.
Frederic Esclassan, Jennifer Francois, Keith G Phillips, Sally Loomis, Gary Gilmour. Behav Neurosci 2015
32
25

Deletions of NRXN1 (neurexin-1) predispose to a wide spectrum of developmental disorders.
Michael S L Ching, Yiping Shen, Wen-Hann Tan, Shafali S Jeste, Eric M Morrow, Xiaoli Chen, Nahit M Mukaddes, Seung-Yun Yoo, Ellen Hanson, Rachel Hundley,[...]. Am J Med Genet B Neuropsychiatr Genet 2010
196
8

Astrocytic neuroligins control astrocyte morphogenesis and synaptogenesis.
Jeff A Stogsdill, Juan Ramirez, Di Liu, Yong Ho Kim, Katherine T Baldwin, Eray Enustun, Tiffany Ejikeme, Ru-Rong Ji, Cagla Eroglu. Nature 2017
133
8

Transcellular Nanoalignment of Synaptic Function.
Thomas Biederer, Pascal S Kaeser, Thomas A Blanpied. Neuron 2017
122
8

Adult mouse cortical cell taxonomy revealed by single cell transcriptomics.
Bosiljka Tasic, Vilas Menon, Thuc Nghi Nguyen, Tae Kyung Kim, Tim Jarsky, Zizhen Yao, Boaz Levi, Lucas T Gray, Staci A Sorensen, Tim Dolbeare,[...]. Nat Neurosci 2016
715
8

Nanopore long-read RNAseq reveals widespread transcriptional variation among the surface receptors of individual B cells.
Ashley Byrne, Anna E Beaudin, Hugh E Olsen, Miten Jain, Charles Cole, Theron Palmer, Rebecca M DuBois, E Camilla Forsberg, Mark Akeson, Christopher Vollmers. Nat Commun 2017
151
8

Single-cell isoform RNA sequencing characterizes isoforms in thousands of cerebellar cells.
Ishaan Gupta, Paul G Collier, Bettina Haase, Ahmed Mahfouz, Anoushka Joglekar, Taylor Floyd, Frank Koopmans, Ben Barres, August B Smit, Steven A Sloan,[...]. Nat Biotechnol 2018
83
9

Genetic targeting of NRXN2 in mice unveils role in excitatory cortical synapse function and social behaviors.
Gesche Born, Hannah M Grayton, Hanna Langhorst, Irina Dudanova, Astrid Rohlmann, Benjamin W Woodward, David A Collier, Cathy Fernandes, Markus Missler. Front Synaptic Neurosci 2015
37
18

Neuroligin-1 controls synaptic abundance of NMDA-type glutamate receptors through extracellular coupling.
Elaine C Budreck, Oh-Bin Kwon, Jung Hoon Jung, Stephane Baudouin, Albert Thommen, Hye-Sun Kim, Yugo Fukazawa, Harumi Harada, Katsuhiko Tabuchi, Ryuichi Shigemoto,[...]. Proc Natl Acad Sci U S A 2013
111
7


MDGAs interact selectively with neuroligin-2 but not other neuroligins to regulate inhibitory synapse development.
Kangduk Lee, Yoonji Kim, Sung-Jin Lee, Yuan Qiang, Dongmin Lee, Hyun Woo Lee, Hyun Kim, H Shawn Je, Thomas C Südhof, Jaewon Ko. Proc Natl Acad Sci U S A 2013
80
8

Mapping autism risk loci using genetic linkage and chromosomal rearrangements.
Peter Szatmari, Andrew D Paterson, Lonnie Zwaigenbaum, Wendy Roberts, Jessica Brian, Xiao-Qing Liu, John B Vincent, Jennifer L Skaug, Ann P Thompson, Lili Senman,[...]. Nat Genet 2007
952
7

Systematic discovery of regulated and conserved alternative exons in the mammalian brain reveals NMD modulating chromatin regulators.
Qinghong Yan, Sebastien M Weyn-Vanhentenryck, Jie Wu, Steven A Sloan, Ye Zhang, Kenian Chen, Jia Qian Wu, Ben A Barres, Chaolin Zhang. Proc Natl Acad Sci U S A 2015
80
8

Accurate identification and analysis of human mRNA isoforms using deep long read sequencing.
Hagen Tilgner, Debasish Raha, Lukas Habegger, Mohammed Mohiuddin, Mark Gerstein, Michael Snyder. G3 (Bethesda) 2013
36
19

LoRDEC: accurate and efficient long read error correction.
Leena Salmela, Eric Rivals. Bioinformatics 2014
250
7

IL-1 receptor accessory protein-like 1 associated with mental retardation and autism mediates synapse formation by trans-synaptic interaction with protein tyrosine phosphatase δ.
Tomoyuki Yoshida, Misato Yasumura, Takeshi Uemura, Sung-Jin Lee, Moonjin Ra, Ryo Taguchi, Yoichiro Iwakura, Masayoshi Mishina. J Neurosci 2011
108
7


The structure of neurexin 1α reveals features promoting a role as synaptic organizer.
Fang Chen, Vandavasi Venugopal, Beverly Murray, Gabby Rudenko. Structure 2011
52
13


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.