A citation-based method for searching scientific literature

Kenneth A Matreyek, Weifeng Wang, Erik Serrao, Parmit Kumar Singh, Henry L Levin, Alan Engelman. Retrovirology 2014
Times Cited: 61







List of co-cited articles
932 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity



CryoEM structure of MxB reveals a novel oligomerization interface critical for HIV restriction.
Frances J D Alvarez, Shaoda He, Juan R Perilla, Sooin Jang, Klaus Schulten, Alan N Engelman, Sjors H W Scheres, Peijun Zhang. Sci Adv 2017
35
31

HIV Restriction Factors and Mechanisms of Evasion.
Michael H Malim, Paul D Bieniasz. Cold Spring Harb Perspect Med 2012
306
16

Crystal structure of human cyclophilin A bound to the amino-terminal domain of HIV-1 capsid.
T R Gamble, F F Vajdos, S Yoo, D K Worthylake, M Houseweart, W I Sundquist, C P Hill. Cell 1996
576
16

TRIM5 is an innate immune sensor for the retrovirus capsid lattice.
Thomas Pertel, Stéphane Hausmann, Damien Morger, Sara Züger, Jessica Guerra, Josefina Lascano, Christian Reinhard, Federico A Santoni, Pradeep D Uchil, Laurence Chatel,[...]. Nature 2011
447
16

A quantitative assay for HIV DNA integration in vivo.
S L Butler, M S Hansen, F D Bushman. Nat Med 2001
550
16


The IFITM proteins inhibit HIV-1 infection.
Jennifer Lu, Qinghua Pan, Liwei Rong, Wei He, Shan-Lu Liu, Chen Liang. J Virol 2011
264
16

Nuclear architecture dictates HIV-1 integration site selection.
Bruna Marini, Attila Kertesz-Farkas, Hashim Ali, Bojana Lucic, Kamil Lisek, Lara Manganaro, Sandor Pongor, Roberto Luzzati, Alessandra Recchia, Fulvio Mavilio,[...]. Nature 2015
187
16

Human immunodeficiency virus type 1 capsid mutation N74D alters cyclophilin A dependence and impairs macrophage infection.
Zandrea Ambrose, KyeongEun Lee, Jean Ndjomou, Hongzhan Xu, Ilker Oztop, James Matous, Taichiro Takemura, Derya Unutmaz, Alan Engelman, Stephen H Hughes,[...]. J Virol 2012
66
16


Multiple components of the nuclear pore complex interact with the amino-terminus of MX2 to facilitate HIV-1 restriction.
Matthew D J Dicks, Gilberto Betancor, Jose M Jimenez-Guardeño, Lucie Pessel-Vivares, Luis Apolonia, Caroline Goujon, Michael H Malim. PLoS Pathog 2018
26
38

The interferon-induced protein BST-2 restricts HIV-1 release and is downregulated from the cell surface by the viral Vpu protein.
Nanette Van Damme, Daniel Goff, Chris Katsura, Rebecca L Jorgenson, Richard Mitchell, Marc C Johnson, Edward B Stephens, John Guatelli. Cell Host Microbe 2008
775
14

SAMHD1 restricts HIV-1 infection in resting CD4(+) T cells.
Hanna-Mari Baldauf, Xiaoyu Pan, Elina Erikson, Sarah Schmidt, Waaqo Daddacha, Manja Burggraf, Kristina Schenkova, Ina Ambiel, Guido Wabnitz, Thomas Gramberg,[...]. Nat Med 2012
413
14

cDNA structures and regulation of two interferon-induced human Mx proteins.
M Aebi, J Fäh, N Hurt, C E Samuel, D Thomis, L Bazzigher, J Pavlovic, O Haller, P Staeheli. Mol Cell Biol 1989
280
14

HIV-1 and interferons: who's interfering with whom?
Tomas Doyle, Caroline Goujon, Michael H Malim. Nat Rev Microbiol 2015
176
14

Cyclophilin A retrotransposition into TRIM5 explains owl monkey resistance to HIV-1.
David M Sayah, Elena Sokolskaja, Lionel Berthoux, Jeremy Luban. Nature 2004
508
14


STRUCTURAL VIROLOGY. X-ray crystal structures of native HIV-1 capsid protein reveal conformational variability.
Anna T Gres, Karen A Kirby, Vineet N KewalRamani, John J Tanner, Owen Pornillos, Stefan G Sarafianos. Science 2015
129
14


The capsids of HIV-1 and HIV-2 determine immune detection of the viral cDNA by the innate sensor cGAS in dendritic cells.
Xavier Lahaye, Takeshi Satoh, Matteo Gentili, Silvia Cerboni, Cécile Conrad, Ilse Hurbain, Ahmed El Marjou, Christine Lacabaratz, Jean-Daniel Lelièvre, Nicolas Manel. Immunity 2013
235
14

Human nucleoporins promote HIV-1 docking at the nuclear pore, nuclear import and integration.
Francesca Di Nunzio, Anne Danckaert, Thomas Fricke, Patricio Perez, Juliette Fernandez, Emmanuelle Perret, Pascal Roux, Spencer Shorte, Pierre Charneau, Felipe Diaz-Griffero,[...]. PLoS One 2012
107
14

Formation of a human immunodeficiency virus type 1 core of optimal stability is crucial for viral replication.
Brett M Forshey, Uta von Schwedler, Wesley I Sundquist, Christopher Aiken. J Virol 2002
378
14

Mature HIV-1 capsid structure by cryo-electron microscopy and all-atom molecular dynamics.
Gongpu Zhao, Juan R Perilla, Ernest L Yufenyuy, Xin Meng, Bo Chen, Jiying Ning, Jinwoo Ahn, Angela M Gronenborn, Klaus Schulten, Christopher Aiken,[...]. Nature 2013
436
13

SAMHD1 restricts the replication of human immunodeficiency virus type 1 by depleting the intracellular pool of deoxynucleoside triphosphates.
Hichem Lahouassa, Waaqo Daddacha, Henning Hofmann, Diana Ayinde, Eric C Logue, Loïc Dragin, Nicolin Bloch, Claire Maudet, Matthieu Bertrand, Thomas Gramberg,[...]. Nat Immunol 2012
562
13

Broad antiretroviral defence by human APOBEC3G through lethal editing of nascent reverse transcripts.
Bastien Mangeat, Priscilla Turelli, Gersende Caron, Marc Friedli, Luc Perrin, Didier Trono. Nature 2003
13

Fates of retroviral core components during unrestricted and TRIM5-restricted infection.
Sebla B Kutluay, David Perez-Caballero, Paul D Bieniasz. PLoS Pathog 2013
71
13

Structural basis of oligomerization in the stalk region of dynamin-like MxA.
Song Gao, Alexander von der Malsburg, Susann Paeschke, Joachim Behlke, Otto Haller, Georg Kochs, Oliver Daumke. Nature 2010
171
13

Antivirally active MxA protein sequesters La Crosse virus nucleocapsid protein into perinuclear complexes.
Georg Kochs, Christian Janzen, Heinz Hohenberg, Otto Haller. Proc Natl Acad Sci U S A 2002
138
13

Human immunodeficiency virus type 1 Gag protein binds to cyclophilins A and B.
J Luban, K L Bossolt, E K Franke, G V Kalpana, S P Goff. Cell 1993
668
13

Transportin-SR2 imports HIV into the nucleus.
Frauke Christ, Wannes Thys, Jan De Rijck, Rik Gijsbers, Alberto Albanese, Daniele Arosio, Stephane Emiliani, Jean-Christophe Rain, Richard Benarous, Anna Cereseto,[...]. Curr Biol 2008
187
13

HIV-1 capsid undergoes coupled binding and isomerization by the nuclear pore protein NUP358.
Katsiaryna Bichel, Amanda J Price, Torsten Schaller, Greg J Towers, Stefan M V Freund, Leo C James. Retrovirology 2013
66
13

HIV-1 capsid-targeting domain of cleavage and polyadenylation specificity factor 6.
Kyeongeun Lee, Alok Mulky, Wendy Yuen, Thomas D Martin, Nicholas R Meyerson, Laura Choi, Hyun Yu, Sara L Sawyer, Vineet N Kewalramani. J Virol 2012
59
13


The ability of TNPO3-depleted cells to inhibit HIV-1 infection requires CPSF6.
Thomas Fricke, Jose Carlos Valle-Casuso, Tommy E White, Alberto Brandariz-Nuñez, William J Bosche, Natalia Reszka, Robert Gorelick, Felipe Diaz-Griffero. Retrovirology 2013
64
13

Complementary assays reveal a relationship between HIV-1 uncoating and reverse transcription.
Amy E Hulme, Omar Perez, Thomas J Hope. Proc Natl Acad Sci U S A 2011
173
13

A cyclophilin homology domain-independent role for Nup358 in HIV-1 infection.
Anne M Meehan, Dyana T Saenz, Rebekah Guevera, James H Morrison, Mary Peretz, Hind J Fadel, Masakazu Hamada, Jan van Deursen, Eric M Poeschla. PLoS Pathog 2014
34
23

The host proteins transportin SR2/TNPO3 and cyclophilin A exert opposing effects on HIV-1 uncoating.
Vaibhav B Shah, Jiong Shi, David R Hout, Ilker Oztop, Lavanya Krishnan, Jinwoo Ahn, Matthew S Shotwell, Alan Engelman, Christopher Aiken. J Virol 2013
97
13

MxB Is Not Responsible for the Blocking of HIV-1 Infection Observed in Alpha Interferon-Treated Cells.
Silvana Opp, Daniel A S A Vieira, Bianca Schulte, Sumit K Chanda, Felipe Diaz-Griffero. J Virol 2015
16
50

SERINC3 and SERINC5 restrict HIV-1 infectivity and are counteracted by Nef.
Yoshiko Usami, Yuanfei Wu, Heinrich G Göttlinger. Nature 2015
241
13

Systematic identification of type I and type II interferon-induced antiviral factors.
Su-Yang Liu, David Jesse Sanchez, Roghiyh Aliyari, Sun Lu, Genhong Cheng. Proc Natl Acad Sci U S A 2012
241
11

Transient dimerization of human MxA promotes GTP hydrolysis, resulting in a mechanical power stroke.
Martin L Rennie, Siri A McKelvie, Esther M M Bulloch, Richard L Kingston. Structure 2014
30
23

A role for LEDGF/p75 in targeting HIV DNA integration.
Angela Ciuffi, Manuel Llano, Eric Poeschla, Christian Hoffmann, Jeremy Leipzig, Paul Shinn, Joseph R Ecker, Frederic Bushman. Nat Med 2005
440
11

LEDGF/p75 functions downstream from preintegration complex formation to effect gene-specific HIV-1 integration.
Ming-Chieh Shun, Nidhanapati K Raghavendra, Nick Vandegraaff, Janet E Daigle, Siobhan Hughes, Paul Kellam, Peter Cherepanov, Alan Engelman. Genes Dev 2007
329
11

HIV integration site selection: analysis by massively parallel pyrosequencing reveals association with epigenetic modifications.
Gary P Wang, Angela Ciuffi, Jeremy Leipzig, Charles C Berry, Frederic D Bushman. Genome Res 2007
306
11

RING domain mutations uncouple TRIM5α restriction of HIV-1 from inhibition of reverse transcription and acceleration of uncoating.
Amanda Roa, Fumiaki Hayashi, Yang Yang, Maritza Lienlaf, Jing Zhou, Jiong Shi, Satoru Watanabe, Takanori Kigawa, Shigeyuki Yokoyama, Christopher Aiken,[...]. J Virol 2012
63
11

Assembly and analysis of conical models for the HIV-1 core.
B K Ganser, S Li, V Y Klishko, J T Finch, W I Sundquist. Science 1999
449
11

IFITM proteins incorporated into HIV-1 virions impair viral fusion and spread.
Alex A Compton, Timothée Bruel, Françoise Porrot, Adeline Mallet, Martin Sachse, Marine Euvrard, Chen Liang, Nicoletta Casartelli, Olivier Schwartz. Cell Host Microbe 2014
113
11


HIV-1 capsids bind and exploit the kinesin-1 adaptor FEZ1 for inward movement to the nucleus.
Viacheslav Malikov, Eveline Santos da Silva, Vladimir Jovasevic, Geoffrey Bennett, Daniel A de Souza Aranha Vieira, Bianca Schulte, Felipe Diaz-Griffero, Derek Walsh, Mojgan H Naghavi. Nat Commun 2015
112
11


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.