A citation-based method for searching scientific literature

Jose F Moruno-Manchon, Edward C Koellhoffer, Jayakrishnan Gopakumar, Shashank Hambarde, Nayun Kim, Louise D McCullough, Andrey S Tsvetkov. Aging (Albany NY) 2017
Times Cited: 37







List of co-cited articles
480 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Whole genome experimental maps of DNA G-quadruplexes in multiple species.
Giovanni Marsico, Vicki S Chambers, Aleksandr B Sahakyan, Patrick McCauley, Jonathan M Boutell, Marco Di Antonio, Shankar Balasubramanian. Nucleic Acids Res 2019
150
13


G-quadruplex-induced instability during leading-strand replication.
Judith Lopes, Aurèle Piazza, Rodrigo Bermejo, Barry Kriegsman, Arianna Colosio, Marie-Paule Teulade-Fichou, Marco Foiani, Alain Nicolas. EMBO J 2011
219
13

Replication of G Quadruplex DNA.
Leticia Koch Lerner, Julian E Sale. Genes (Basel) 2019
72
13

The Structure and Function of DNA G-Quadruplexes.
Jochen Spiegel, Santosh Adhikari, Shankar Balasubramanian. Trends Chem 2020
246
13

The regulation and functions of DNA and RNA G-quadruplexes.
Dhaval Varshney, Jochen Spiegel, Katherine Zyner, David Tannahill, Shankar Balasubramanian. Nat Rev Mol Cell Biol 2020
308
13


Topoisomerase I plays a critical role in suppressing genome instability at a highly transcribed G-quadruplex-forming sequence.
Puja Yadav, Victoria Harcy, Juan Lucas Argueso, Margaret Dominska, Sue Jinks-Robertson, Nayun Kim. PLoS Genet 2014
33
12

Regulation of gene expression by the BLM helicase correlates with the presence of G-quadruplex DNA motifs.
Giang Huong Nguyen, Weiliang Tang, Ana I Robles, Richard P Beyer, Lucas T Gray, Judith A Welsh, Aaron J Schetter, Kensuke Kumamoto, Xin Wei Wang, Ian D Hickson,[...]. Proc Natl Acad Sci U S A 2014
82
10

Identification and characterization of nucleolin as a c-myc G-quadruplex-binding protein.
Verónica González, Kexiao Guo, Laurence Hurley, Daekyu Sun. J Biol Chem 2009
210
10

The Werner syndrome RECQ helicase targets G4 DNA in human cells to modulate transcription.
Weiliang Tang, Ana I Robles, Richard P Beyer, Lucas T Gray, Giang H Nguyen, Junko Oshima, Nancy Maizels, Curtis C Harris, Raymond J Monnat. Hum Mol Genet 2016
59
10

Genomic distribution and functional analyses of potential G-quadruplex-forming sequences in Saccharomyces cerevisiae.
Steve G Hershman, Qijun Chen, Julia Y Lee, Marina L Kozak, Peng Yue, Li-San Wang, F Brad Johnson. Nucleic Acids Res 2008
208
10


How long is too long? Effects of loop size on G-quadruplex stability.
Aurore Guédin, Julien Gros, Patrizia Alberti, Jean-Louis Mergny. Nucleic Acids Res 2010
274
10

Yeast transcription co-activator Sub1 and its human homolog PC4 preferentially bind to G-quadruplex DNA.
Jun Gao, Boris L Zybailov, Alicia K Byrd, Wezley C Griffin, Shubeena Chib, Samuel G Mackintosh, Alan J Tackett, Kevin D Raney. Chem Commun (Camb) 2015
29
13

Detection of G-quadruplex DNA in mammalian cells.
Alexander Henderson, Yuliang Wu, Yu Chuan Huang, Elizabeth A Chavez, Jesse Platt, F Brad Johnson, Robert M Brosh, Dipankar Sen, Peter M Lansdorp. Nucleic Acids Res 2014
309
10


Crystal structure of parallel quadruplexes from human telomeric DNA.
Gary N Parkinson, Michael P H Lee, Stephen Neidle. Nature 2002
10

Metal Cations in G-Quadruplex Folding and Stability.
Debmalya Bhattacharyya, Gayan Mirihana Arachchilage, Soumitra Basu. Front Chem 2016
270
10

Visualization of RNA-Quadruplexes in Live Cells.
Aurélien Laguerre, Kyle Hukezalie, Pascale Winckler, Fares Katranji, Gaëtan Chanteloup, Marc Pirrotta, Jean-Marie Perrier-Cornet, Judy M Y Wong, David Monchaud. J Am Chem Soc 2015
135
10

Small-molecule-mediated G-quadruplex isolation from human cells.
Sebastian Müller, Sunita Kumari, Raphaël Rodriguez, Shankar Balasubramanian. Nat Chem 2010
126
10


G-quadruplexes regulate Epstein-Barr virus-encoded nuclear antigen 1 mRNA translation.
Pierre Murat, Jie Zhong, Lea Lekieffre, Nathan P Cowieson, Jennifer L Clancy, Thomas Preiss, Shankar Balasubramanian, Rajiv Khanna, Judy Tellam. Nat Chem Biol 2014
163
10

QGRS Mapper: a web-based server for predicting G-quadruplexes in nucleotide sequences.
Oleg Kikin, Lawrence D'Antonio, Paramjeet S Bagga. Nucleic Acids Res 2006
527
10

Unraveling cell type-specific and reprogrammable human replication origin signatures associated with G-quadruplex consensus motifs.
Emilie Besnard, Amélie Babled, Laure Lapasset, Ollivier Milhavet, Hugues Parrinello, Christelle Dantec, Jean-Michel Marin, Jean-Marc Lemaitre. Nat Struct Mol Biol 2012
259
10

Inhibition of human telomerase by a G-quadruplex-interactive compound.
D Sun, B Thompson, B E Cathers, M Salazar, S M Kerwin, J O Trent, T C Jenkins, S Neidle, L H Hurley. J Med Chem 1997
607
10

Expanded GGGGCC hexanucleotide repeat in noncoding region of C9ORF72 causes chromosome 9p-linked FTD and ALS.
Mariely DeJesus-Hernandez, Ian R Mackenzie, Bradley F Boeve, Adam L Boxer, Matt Baker, Nicola J Rutherford, Alexandra M Nicholson, NiCole A Finch, Heather Flynn, Jennifer Adamson,[...]. Neuron 2011
10

Identification of functional tetramolecular RNA G-quadruplexes derived from transfer RNAs.
Shawn M Lyons, Dorota Gudanis, Steven M Coyne, Zofia Gdaniec, Pavel Ivanov. Nat Commun 2017
102
10

G-quadruplexes: Emerging roles in neurodegenerative diseases and the non-coding transcriptome.
Roberto Simone, Pietro Fratta, Stephen Neidle, Gary N Parkinson, Adrian M Isaacs. FEBS Lett 2015
135
10

Sphingosine kinase 1-associated autophagy differs between neurons and astrocytes.
Jose F Moruno-Manchon, Ndidi-Ese Uzor, Chandrashekar R Ambati, Vivekananda Shetty, Nagireddy Putluri, Chinnaswamy Jagannath, Louise D McCullough, Andrey S Tsvetkov. Cell Death Dis 2018
24
16


R-loop induced G-quadruplex in non-template promotes transcription by successive R-loop formation.
Chun-Ying Lee, Christina McNerney, Kevin Ma, Walter Zhao, Ashley Wang, Sua Myong. Nat Commun 2020
31
12

A Genetic Map of the Response to DNA Damage in Human Cells.
Michele Olivieri, Tiffany Cho, Alejandro Álvarez-Quilón, Kejiao Li, Matthew J Schellenberg, Michal Zimmermann, Nicole Hustedt, Silvia Emma Rossi, Salomé Adam, Henrique Melo,[...]. Cell 2020
147
10

Pif1 is essential for efficient replisome progression through lagging strand G-quadruplex DNA secondary structures.
Danielle Dahan, Ioannis Tsirkas, Daniel Dovrat, Melanie A Sparks, Saurabh P Singh, Roberto Galletto, Amir Aharoni. Nucleic Acids Res 2018
44
10

Manipulating Adult Neural Stem and Progenitor Cells with G-Quadruplex Ligands.
David C Goldberg, Lilah Fones, Ana L Vivinetto, Joseph T Caufield, Rajiv R Ratan, John W Cave. ACS Chem Neurosci 2020
7
57

EXO1 resection at G-quadruplex structures facilitates resolution and replication.
Susanna Stroik, Kevin Kurtz, Kevin Lin, Sergey Karachenets, Chad L Myers, Anja-Katrin Bielinsky, Eric A Hendrickson. Nucleic Acids Res 2020
17
23

BLM helicase suppresses recombination at G-quadruplex motifs in transcribed genes.
Niek van Wietmarschen, Sarra Merzouk, Nancy Halsema, Diana C J Spierings, Victor Guryev, Peter M Lansdorp. Nat Commun 2018
59
10

BLM unfolds G-quadruplexes in different structural environments through different mechanisms.
Wen-Qiang Wu, Xi-Miao Hou, Ming Li, Shuo-Xing Dou, Xu-Guang Xi. Nucleic Acids Res 2015
50
10

FANCJ promotes DNA synthesis through G-quadruplex structures.
Pau Castillo Bosch, Sandra Segura-Bayona, Wouter Koole, Jane T van Heteren, James M Dewar, Marcel Tijsterman, Puck Knipscheer. EMBO J 2014
86
10

Proteostasis of polyglutamine varies among neurons and predicts neurodegeneration.
Andrey S Tsvetkov, Montserrat Arrasate, Sami Barmada, D Michael Ando, Punita Sharma, Benjamin A Shaby, Steven Finkbeiner. Nat Chem Biol 2013
125
8

TFEB ameliorates the impairment of the autophagy-lysosome pathway in neurons induced by doxorubicin.
Jose Felix Moruno-Manchon, Ndidi-Ese Uzor, Shelli R Kesler, Jeffrey S Wefel, Debra M Townley, Archana Sidalaghatta Nagaraja, Sunila Pradeep, Lingegowda S Mangala, Anil K Sood, Andrey S Tsvetkov. Aging (Albany NY) 2016
37
8

Cytoplasmic sphingosine-1-phosphate pathway modulates neuronal autophagy.
Jose Felix Moruno Manchon, Ndidi-Ese Uzor, Yuri Dabaghian, Erin E Furr-Stimming, Steven Finkbeiner, Andrey S Tsvetkov. Sci Rep 2015
59
8

Formation of a G-quadruplex at the BCL2 major breakpoint region of the t(14;18) translocation in follicular lymphoma.
Mridula Nambiar, G Goldsmith, Balaji T Moorthy, Michael R Lieber, Mamata V Joshi, Bibha Choudhary, Ramakrishna V Hosur, Sathees C Raghavan. Nucleic Acids Res 2011
91
8

Nucleolin stabilizes G-quadruplex structures folded by the LTR promoter and silences HIV-1 viral transcription.
Elena Tosoni, Ilaria Frasson, Matteo Scalabrin, Rosalba Perrone, Elena Butovskaya, Matteo Nadai, Giorgio Palù, Dan Fabris, Sara N Richter. Nucleic Acids Res 2015
84
8

A non-canonical DNA structure is a binding motif for the transcription factor SP1 in vitro.
Eun-Ang Raiber, Ramon Kranaster, Enid Lam, Mehran Nikan, Shankar Balasubramanian. Nucleic Acids Res 2012
108
8

Tetraplex DNA and its interacting proteins.
Michael Fry. Front Biosci 2007
125
8

Translocation and deletion breakpoints in cancer genomes are associated with potential non-B DNA-forming sequences.
Albino Bacolla, John A Tainer, Karen M Vasquez, David N Cooper. Nucleic Acids Res 2016
84
8

Mechanisms and implications of transcription blockage by guanine-rich DNA sequences.
Boris P Belotserkovskii, Richard Liu, Silvia Tornaletti, Maria M Krasilnikova, Sergei M Mirkin, Philip C Hanawalt. Proc Natl Acad Sci U S A 2010
99
8

High affinity interactions of nucleolin with G-G-paired rDNA.
L A Hanakahi, H Sun, N Maizels. J Biol Chem 1999
178
8

Quadruplex-duplex motifs as new topoisomerase I inhibitors.
Li Shuai, Minggang Deng, Dan Zhang, Yangyang Zhou, Xiang Zhou. Nucleosides Nucleotides Nucleic Acids 2010
13
23


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.