A citation-based method for searching scientific literature

Vladimir Kirkin, Vladimir V Rogov. Mol Cell 2019
Times Cited: 195







List of co-cited articles
1166 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Atg9 is a lipid scramblase that mediates autophagosomal membrane expansion.
Kazuaki Matoba, Tetsuya Kotani, Akihisa Tsutsumi, Takuma Tsuji, Takaharu Mori, Daisuke Noshiro, Yuji Sugita, Norimichi Nomura, So Iwata, Yoshinori Ohsumi,[...]. Nat Struct Mol Biol 2020
112
8


The coming of age of chaperone-mediated autophagy.
Susmita Kaushik, Ana Maria Cuervo. Nat Rev Mol Cell Biol 2018
493
8

Diverse Cellular Roles of Autophagy.
Hideaki Morishita, Noboru Mizushima. Annu Rev Cell Dev Biol 2019
134
8

ER-Phagy: Quality Control and Turnover of Endoplasmic Reticulum.
Haruka Chino, Noboru Mizushima. Trends Cell Biol 2020
90
8

Autophagy-Independent Functions of the Autophagy Machinery.
Lorenzo Galluzzi, Douglas R Green. Cell 2019
320
7

p62 filaments capture and present ubiquitinated cargos for autophagy.
Gabriele Zaffagnini, Adriana Savova, Alberto Danieli, Julia Romanov, Shirley Tremel, Michael Ebner, Thomas Peterbauer, Martin Sztacho, Riccardo Trapannone, Abul K Tarafder,[...]. EMBO J 2018
161
7

Regulation mechanisms and signaling pathways of autophagy.
Congcong He, Daniel J Klionsky. Annu Rev Genet 2009
7

Nutrient-dependent mTORC1 association with the ULK1-Atg13-FIP200 complex required for autophagy.
Nao Hosokawa, Taichi Hara, Takeshi Kaizuka, Chieko Kishi, Akito Takamura, Yutaka Miura, Shun-ichiro Iemura, Tohru Natsume, Kenji Takehana, Naoyuki Yamada,[...]. Mol Biol Cell 2009
7

Lysosome biology in autophagy.
Willa Wen-You Yim, Noboru Mizushima. Cell Discov 2020
175
7

The Cvt pathway as a model for selective autophagy.
Melinda A Lynch-Day, Daniel J Klionsky. FEBS Lett 2010
208
7


Autophagy in immunity and inflammation.
Beth Levine, Noboru Mizushima, Herbert W Virgin. Nature 2011
7

Autophagy during viral infection - a double-edged sword.
Younho Choi, James W Bowman, Jae U Jung. Nat Rev Microbiol 2018
318
7

Mitochondrial outer-membrane protein FUNDC1 mediates hypoxia-induced mitophagy in mammalian cells.
Lei Liu, Du Feng, Guo Chen, Ming Chen, Qiaoxia Zheng, Pingping Song, Qi Ma, Chongzhuo Zhu, Rui Wang, Wanjun Qi,[...]. Nat Cell Biol 2012
909
7

The machinery of macroautophagy.
Yuchen Feng, Ding He, Zhiyuan Yao, Daniel J Klionsky. Cell Res 2014
7



Autophagosome formation from membrane compartments enriched in phosphatidylinositol 3-phosphate and dynamically connected to the endoplasmic reticulum.
Elizabeth L Axe, Simon A Walker, Maria Manifava, Priya Chandra, H Llewelyn Roderick, Anja Habermann, Gareth Griffiths, Nicholas T Ktistakis. J Cell Biol 2008
7

Autophagy regulates lipid metabolism.
Rajat Singh, Susmita Kaushik, Yongjun Wang, Youqing Xiang, Inna Novak, Masaaki Komatsu, Keiji Tanaka, Ana Maria Cuervo, Mark J Czaja. Nature 2009
7

ER-phagy and human diseases.
Christian A Hübner, Ivan Dikic. Cell Death Differ 2020
43
16

Atg2 mediates direct lipid transfer between membranes for autophagosome formation.
Takuo Osawa, Tetsuya Kotani, Tatsuya Kawaoka, Eri Hirata, Kuninori Suzuki, Hitoshi Nakatogawa, Yoshinori Ohsumi, Nobuo N Noda. Nat Struct Mol Biol 2019
174
7

Historical landmarks of autophagy research.
Yoshinori Ohsumi. Cell Res 2014
572
7

Structure, lipid scrambling activity and role in autophagosome formation of ATG9A.
Shintaro Maeda, Hayashi Yamamoto, Lisa N Kinch, Christina M Garza, Satoru Takahashi, Chinatsu Otomo, Nick V Grishin, Stefano Forli, Noboru Mizushima, Takanori Otomo. Nat Struct Mol Biol 2020
87
8

The ATG conjugation systems in autophagy.
Noboru Mizushima. Curr Opin Cell Biol 2020
139
7

LC3-Associated Endocytosis Facilitates β-Amyloid Clearance and Mitigates Neurodegeneration in Murine Alzheimer's Disease.
Bradlee L Heckmann, Brett J W Teubner, Bart Tummers, Emilio Boada-Romero, Lacie Harris, Mao Yang, Clifford S Guy, Stanislav S Zakharenko, Douglas R Green. Cell 2019
187
7

Molecular characterization of LC3-associated phagocytosis reveals distinct roles for Rubicon, NOX2 and autophagy proteins.
Jennifer Martinez, R K Subbarao Malireddi, Qun Lu, Larissa Dias Cunha, Stephane Pelletier, Sebastien Gingras, Robert Orchard, Jun-Lin Guan, Haiyan Tan, Junmin Peng,[...]. Nat Cell Biol 2015
499
7

Microtubule-associated protein 1 light chain 3 alpha (LC3)-associated phagocytosis is required for the efficient clearance of dead cells.
Jennifer Martinez, Johann Almendinger, Andrew Oberst, Rachel Ness, Christopher P Dillon, Patrick Fitzgerald, Michael O Hengartner, Douglas R Green. Proc Natl Acad Sci U S A 2011
459
7


LC3, a mammalian homologue of yeast Apg8p, is localized in autophagosome membranes after processing.
Y Kabeya, N Mizushima, T Ueno, A Yamamoto, T Kirisako, T Noda, E Kominami, Y Ohsumi, T Yoshimori. EMBO J 2000
7

Mechanisms of Selective Autophagy.
Trond Lamark, Terje Johansen. Annu Rev Cell Dev Biol 2021
32
21

A selective ER-phagy exerts procollagen quality control via a Calnexin-FAM134B complex.
Alison Forrester, Chiara De Leonibus, Paolo Grumati, Elisa Fasana, Marilina Piemontese, Leopoldo Staiano, Ilaria Fregno, Andrea Raimondi, Alessandro Marazza, Gemma Bruno,[...]. EMBO J 2019
111
7


Autophagy: renovation of cells and tissues.
Noboru Mizushima, Masaaki Komatsu. Cell 2011
6

Regulation of selective autophagy: the p62/SQSTM1 paradigm.
Trond Lamark, Steingrim Svenning, Terje Johansen. Essays Biochem 2017
284
6

The Roles of Ubiquitin in Mediating Autophagy.
Zhangyuan Yin, Hana Popelka, Yuchen Lei, Ying Yang, Daniel J Klionsky. Cells 2020
36
16

NBR1-mediated p62-liquid droplets enhance the Keap1-Nrf2 system.
Pablo Sánchez-Martín, Yu-Shin Sou, Shun Kageyama, Masato Koike, Satoshi Waguri, Masaaki Komatsu. EMBO Rep 2020
42
14

A role for NBR1 in autophagosomal degradation of ubiquitinated substrates.
Vladimir Kirkin, Trond Lamark, Yu-Shin Sou, Geir Bjørkøy, Jennifer L Nunn, Jack-Ansgar Bruun, Elena Shvets, David G McEwan, Terje H Clausen, Philipp Wild,[...]. Mol Cell 2009
790
6

TRIMs and Galectins Globally Cooperate and TRIM16 and Galectin-3 Co-direct Autophagy in Endomembrane Damage Homeostasis.
Santosh Chauhan, Suresh Kumar, Ashish Jain, Marisa Ponpuak, Michal H Mudd, Tomonori Kimura, Seong Won Choi, Ryan Peters, Michael Mandell, Jack-Ansgar Bruun,[...]. Dev Cell 2016
215
6

Structural basis of starvation-induced assembly of the autophagy initiation complex.
Yuko Fujioka, Sho W Suzuki, Hayashi Yamamoto, Chika Kondo-Kakuta, Yayoi Kimura, Hisashi Hirano, Rinji Akada, Fuyuhiko Inagaki, Yoshinori Ohsumi, Nobuo N Noda. Nat Struct Mol Biol 2014
134
6

Hierarchy of Atg proteins in pre-autophagosomal structure organization.
Kuninori Suzuki, Yuka Kubota, Takayuki Sekito, Yoshinori Ohsumi. Genes Cells 2007
501
6

ATG8-Binding UIM Proteins Define a New Class of Autophagy Adaptors and Receptors.
Richard S Marshall, Zhihua Hua, Sujina Mali, Fionn McLoughlin, Richard D Vierstra. Cell 2019
142
6

Cleaning House: Selective Autophagy of Organelles.
Allyson L Anding, Eric H Baehrecke. Dev Cell 2017
324
6

A role for ubiquitin in selective autophagy.
Vladimir Kirkin, David G McEwan, Ivana Novak, Ivan Dikic. Mol Cell 2009
917
6

In vivo analysis of autophagy in response to nutrient starvation using transgenic mice expressing a fluorescent autophagosome marker.
Noboru Mizushima, Akitsugu Yamamoto, Makoto Matsui, Tamotsu Yoshimori, Yoshinori Ohsumi. Mol Biol Cell 2004
6

The Atg16L complex specifies the site of LC3 lipidation for membrane biogenesis in autophagy.
Naonobu Fujita, Takashi Itoh, Hiroko Omori, Mitsunori Fukuda, Takeshi Noda, Tamotsu Yoshimori. Mol Biol Cell 2008
719
6

The Autophagy Receptor TAX1BP1 and the Molecular Motor Myosin VI Are Required for Clearance of Salmonella Typhimurium by Autophagy.
David A Tumbarello, Paul T Manna, Mark Allen, Mark Bycroft, Susan D Arden, John Kendrick-Jones, Folma Buss. PLoS Pathog 2015
128
6

Hrr25 triggers selective autophagy-related pathways by phosphorylating receptor proteins.
Chikara Tanaka, Li-Jing Tan, Keisuke Mochida, Hiromi Kirisako, Michiko Koizumi, Eri Asai, Machiko Sakoh-Nakatogawa, Yoshinori Ohsumi, Hitoshi Nakatogawa. J Cell Biol 2014
87
6

Eaten alive: a history of macroautophagy.
Zhifen Yang, Daniel J Klionsky. Nat Cell Biol 2010
6

ULK1.ATG13.FIP200 complex mediates mTOR signaling and is essential for autophagy.
Ian G Ganley, Du H Lam, Junru Wang, Xiaojun Ding, She Chen, Xuejun Jiang. J Biol Chem 2009
961
6


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.