A citation-based method for searching scientific literature

Jacob H Levine, Erin F Simonds, Sean C Bendall, Kara L Davis, El-ad D Amir, Michelle D Tadmor, Oren Litvin, Harris G Fienberg, Astraea Jager, Eli R Zunder, Rachel Finck, Amanda L Gedman, Ina Radtke, James R Downing, Dana Pe'er, Garry P Nolan. Cell 2015
Times Cited: 823







List of co-cited articles
582 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Understanding the complexity of γδ T-cell subsets in mouse and human.
Dick J Pang, Joana F Neves, Nital Sumaria, Daniel J Pennington. Immunology 2012
116
1

Overlapping riboflavin supply pathways in bacteria.
Víctor Antonio García-Angulo. Crit Rev Microbiol 2017
51
1

TCR and Inflammatory Signals Tune Human MAIT Cells to Exert Specific Tissue Repair and Effector Functions.
Tianqi Leng, Hossain Delowar Akther, Carl-Philipp Hackstein, Kate Powell, Thomas King, Matthias Friedrich, Zoe Christoforidou, Sarah McCuaig, Mastura Neyazi, Carolina V Arancibia-Cárcamo,[...]. Cell Rep 2019
87
1

Synthesis of a phosphoantigen prodrug that potently activates Vγ9Vδ2 T-lymphocytes.
Chia-Hung Christine Hsiao, Xiaochen Lin, Rocky J Barney, Rebekah R Shippy, Jin Li, Olga Vinogradova, David F Wiemer, Andrew J Wiemer. Chem Biol 2014
69
1

Ensembl 2021.
Kevin L Howe, Premanand Achuthan, James Allen, Jamie Allen, Jorge Alvarez-Jarreta, M Ridwan Amode, Irina M Armean, Andrey G Azov, Ruth Bennett, Jyothish Bhai,[...]. Nucleic Acids Res 2021
350
1

Graft-Derived Reconstitution of Mucosal-Associated Invariant T Cells after Allogeneic Hematopoietic Cell Transplantation.
Abir Bhattacharyya, Laïla-Aïcha Hanafi, Alyssa Sheih, Jonathan L Golob, Sujatha Srinivasan, Michael J Boeckh, Steven A Pergam, Sajid Mahmood, Kelsey K Baker, Ted A Gooley,[...]. Biol Blood Marrow Transplant 2018
45
2


Microbiota as Predictor of Mortality in Allogeneic Hematopoietic-Cell Transplantation.
Jonathan U Peled, Antonio L C Gomes, Sean M Devlin, Eric R Littmann, Ying Taur, Anthony D Sung, Daniela Weber, Daigo Hashimoto, Ann E Slingerland, John B Slingerland,[...]. N Engl J Med 2020
194
1

Activation and In Vivo Evolution of the MAIT Cell Transcriptome in Mice and Humans Reveals Tissue Repair Functionality.
Timothy S C Hinks, Emanuele Marchi, Maisha Jabeen, Moshe Olshansky, Ayako Kurioka, Troi J Pediongco, Bronwyn S Meehan, Lyudmila Kostenko, Stephen J Turner, Alexandra J Corbett,[...]. Cell Rep 2019
80
1

Tuning of human MAIT cell activation by commensal bacteria species and MR1-dependent T-cell presentation.
Cihan Tastan, Ece Karhan, Wei Zhou, Elizabeth Fleming, Anita Y Voigt, Xudong Yao, Lei Wang, Meghan Horne, Lindsey Placek, Lina Kozhaya,[...]. Mucosal Immunol 2018
51
1

Improved Overall Survival, Relapse-Free-Survival, and Less Graft-vs.-Host-Disease in Patients With High Immune Reconstitution of TCR Gamma Delta Cells 2 Months After Allogeneic Stem Cell Transplantation.
Lia Minculescu, Hanne Vibeke Marquart, Lars Peter Ryder, Niels Smedegaard Andersen, Ida Schjoedt, Lone Smidstrup Friis, Brian Thomas Kornblit, Søren Lykke Petersen, Eva Haastrup, Anne Fischer-Nielsen,[...]. Front Immunol 2019
17
5

Human MAIT cell cytolytic effector proteins synergize to overcome carbapenem resistance in Escherichia coli.
Caroline Boulouis, Wan Rong Sia, Muhammad Yaaseen Gulam, Jocelyn Qi Min Teo, Yi Tian Png, Thanh Kha Phan, Jeffrey Y W Mak, David P Fairlie, Ivan K H Poon, Tse Hsien Koh,[...]. PLoS Biol 2020
23
4

Third-party CD4+ invariant natural killer T cells protect from murine GVHD lethality.
Dominik Schneidawind, Jeanette Baker, Antonio Pierini, Corina Buechele, Richard H Luong, Everett H Meyer, Robert S Negrin. Blood 2015
49
2

Butyrophilin 3A1 binds phosphorylated antigens and stimulates human γδ T cells.
Stefano Vavassori, Anil Kumar, Gan Siok Wan, Gundimeda S Ramanjaneyulu, Marco Cavallari, Sary El Daker, Travis Beddoe, Alex Theodossis, Neal K Williams, Emma Gostick,[...]. Nat Immunol 2013
271
1

Mucosal-Associated Invariant T Cells Display a Poor Reconstitution and Altered Phenotype after Allogeneic Hematopoietic Stem Cell Transplantation.
Martin Solders, Tom Erkers, Laia Gorchs, Thomas Poiret, Mats Remberger, Isabelle Magalhaes, Helen Kaipe. Front Immunol 2017
16
6

Gamma delta T cell reconstitution is associated with fewer infections and improved event-free survival after hematopoietic stem cell transplantation for pediatric leukemia.
Ross Perko, Guolian Kang, Anusha Sunkara, Wing Leung, Paul G Thomas, Mari H Dallas. Biol Blood Marrow Transplant 2015
60
1


PICRUSt2 for prediction of metagenome functions.
Gavin M Douglas, Vincent J Maffei, Jesse R Zaneveld, Svetlana N Yurgel, James R Brown, Christopher M Taylor, Curtis Huttenhower, Morgan G I Langille. Nat Biotechnol 2020
606
1

Transplantation of bone marrow as compared with peripheral-blood cells from HLA-identical relatives in patients with hematologic cancers.
W I Bensinger, P J Martin, B Storer, R Clift, S J Forman, R Negrin, A Kashyap, M E Flowers, K Lilleby, T R Chauncey,[...]. N Engl J Med 2001
727
1

Rebooting Human Immunology.
Mark M Davis, Petter Brodin. Annu Rev Immunol 2018
48
2

Gut microbiome-mediated bile acid metabolism regulates liver cancer via NKT cells.
Chi Ma, Miaojun Han, Bernd Heinrich, Qiong Fu, Qianfei Zhang, Milan Sandhu, David Agdashian, Masaki Terabe, Jay A Berzofsky, Valerie Fako,[...]. Science 2018
487
1

Expansion of IL-17A-secreting CD8+ mucosa-associated invariant T cells in peripheral blood following stem cell mobilization.
Antiopi Varelias, Kate H Gartlan, Andrew N Wilkinson, Stuart D Olver, Luke D Samson, Siok-Keen Tey, Kelli P A MacDonald, Geoffrey R Hill. Blood Adv 2019
5
20

Non-classical Immunity Controls Microbiota Impact on Skin Immunity and Tissue Repair.
Jonathan L Linehan, Oliver J Harrison, Seong-Ji Han, Allyson L Byrd, Ivan Vujkovic-Cvijin, Alejandro V Villarino, Shurjo K Sen, Jahangheer Shaik, Margery Smelkinson, Samira Tamoutounour,[...]. Cell 2018
189
1

Butyrophilin 2A1 is essential for phosphoantigen reactivity by γδ T cells.
Marc Rigau, Simone Ostrouska, Thomas S Fulford, Darryl N Johnson, Katherine Woods, Zheng Ruan, Hamish E G McWilliam, Christopher Hudson, Candani Tutuka, Adam K Wheatley,[...]. Science 2020
129
1

Commensal microbiota affects ischemic stroke outcome by regulating intestinal γδ T cells.
Corinne Benakis, David Brea, Silvia Caballero, Giuseppe Faraco, Jamie Moore, Michelle Murphy, Giulia Sita, Gianfranco Racchumi, Lilan Ling, Eric G Pamer,[...]. Nat Med 2016
454
1

Cytotoxic cells kill intracellular bacteria through granulysin-mediated delivery of granzymes.
Michael Walch, Farokh Dotiwala, Sachin Mulik, Jerome Thiery, Tomas Kirchhausen, Carol Clayberger, Alan M Krensky, Denis Martinvalet, Judy Lieberman. Cell 2014
107
1

The intracellular B30.2 domain of butyrophilin 3A1 binds phosphoantigens to mediate activation of human Vγ9Vδ2 T cells.
Andrew Sandstrom, Cassie-Marie Peigné, Alexandra Léger, James E Crooks, Fabienne Konczak, Marie-Claude Gesnel, Richard Breathnach, Marc Bonneville, Emmanuel Scotet, Erin J Adams. Immunity 2014
282
1

The MetaCyc database of metabolic pathways and enzymes - a 2019 update.
Ron Caspi, Richard Billington, Ingrid M Keseler, Anamika Kothari, Markus Krummenacker, Peter E Midford, Wai Kit Ong, Suzanne Paley, Pallavi Subhraveti, Peter D Karp. Nucleic Acids Res 2020
173
1

Intestinal Blautia Is Associated with Reduced Death from Graft-versus-Host Disease.
Robert R Jenq, Ying Taur, Sean M Devlin, Doris M Ponce, Jenna D Goldberg, Katya F Ahr, Eric R Littmann, Lilan Ling, Asia C Gobourne, Liza C Miller,[...]. Biol Blood Marrow Transplant 2015
405
1

BLAST+: architecture and applications.
Christiam Camacho, George Coulouris, Vahram Avagyan, Ning Ma, Jason Papadopoulos, Kevin Bealer, Thomas L Madden. BMC Bioinformatics 2009
1

DADA2: High-resolution sample inference from Illumina amplicon data.
Benjamin J Callahan, Paul J McMurdie, Michael J Rosen, Andrew W Han, Amy Jo A Johnson, Susan P Holmes. Nat Methods 2016
1

T-cell activation by transitory neo-antigens derived from distinct microbial pathways.
Alexandra J Corbett, Sidonia B G Eckle, Richard W Birkinshaw, Ligong Liu, Onisha Patel, Jennifer Mahony, Zhenjun Chen, Rangsima Reantragoon, Bronwyn Meehan, Hanwei Cao,[...]. Nature 2014
470
1

Reconstitution of the gut microbiota of antibiotic-treated patients by autologous fecal microbiota transplant.
Ying Taur, Katharine Coyte, Jonas Schluter, Elizabeth Robilotti, Cesar Figueroa, Mergim Gjonbalaj, Eric R Littmann, Lilan Ling, Liza Miller, Yangtsho Gyaltshen,[...]. Sci Transl Med 2018
157
1

Clinical manifestations of graft-versus-host disease in human recipients of marrow from HL-A-matched sibling donors.
H Glucksberg, R Storb, A Fefer, C D Buckner, P E Neiman, R A Clift, K G Lerner, E D Thomas. Transplantation 1974
1

Early posttransplantation donor-derived invariant natural killer T-cell recovery predicts the occurrence of acute graft-versus-host disease and overall survival.
Marie-Thérèse Rubio, Lucia Moreira-Teixeira, Emmanuel Bachy, Marie Bouillié, Pierre Milpied, Tereza Coman, Felipe Suarez, Ambroise Marcais, David Sibon, Agnès Buzyn,[...]. Blood 2012
72
1

The biology and functional importance of MAIT cells.
Dale I Godfrey, Hui-Fern Koay, James McCluskey, Nicholas A Gherardin. Nat Immunol 2019
170
1

KEGG as a reference resource for gene and protein annotation.
Minoru Kanehisa, Yoko Sato, Masayuki Kawashima, Miho Furumichi, Mao Tanabe. Nucleic Acids Res 2016
1

Influence of post-transplant mucosal-associated invariant T cell recovery on the development of acute graft-versus-host disease in allogeneic bone marrow transplantation.
Koji Kawaguchi, Katsutsugu Umeda, Eitaro Hiejima, Atsushi Iwai, Masamitsu Mikami, Seishiro Nodomi, Satoshi Saida, Itaru Kato, Hidefumi Hiramatsu, Takahiro Yasumi,[...]. Int J Hematol 2018
25
4

Hematopoietic cell transplantation (HCT)-specific comorbidity index: a new tool for risk assessment before allogeneic HCT.
Mohamed L Sorror, Michael B Maris, Rainer Storb, Frederic Baron, Brenda M Sandmaier, David G Maloney, Barry Storer. Blood 2005
1

Inadequate food and water intake determine mortality following stroke in mice.
Athanasios Lourbopoulos, Uta Mamrak, Stefan Roth, Matilde Balbi, Joshua Shrouder, Arthur Liesz, Farida Hellal, Nikolaus Plesnila. J Cereb Blood Flow Metab 2017
22
4

Small Artery Elastin Distribution and Architecture-Focus on Three Dimensional Organization.
Michael A Hill, Zahra Nourian, I-Lin Ho, Philip S Clifford, Luis Martinez-Lemus, Gerald A Meininger. Microcirculation 2016
10
10

GPVI and Thromboxane Receptor on Platelets Promote Proinflammatory Macrophage Phenotypes during Cutaneous Inflammation.
Sandra Pierre, Bona Linke, Jing Suo, Neda Tarighi, Domenico Del Turco, Dominique Thomas, Nerea Ferreiros, David Stegner, Stefanie Frölich, Marco Sisignano,[...]. J Invest Dermatol 2017
33
3

Delayed Effects of Acute Reperfusion on Vascular Remodeling and Late-Phase Functional Recovery After Stroke.
Violeta Durán-Laforet, David Fernández-López, Alicia García-Culebras, Juan González-Hijón, Ana Moraga, Sara Palma-Tortosa, Isaac García-Yébenes, Adrián Vega-Pérez, Ignacio Lizasoain, María Ángeles Moro. Front Neurosci 2019
4
25


Gene Expression Dynamics at the Neurovascular Unit During Early Regeneration After Cerebral Ischemia/Reperfusion Injury in Mice.
Roxane-Isabelle Kestner, Franziska Mayser, Rajkumar Vutukuri, Lena Hansen, Stefan Günther, Robert Brunkhorst, Kavi Devraj, Waltraud Pfeilschifter. Front Neurosci 2020
8
12

Endothelial tubes assemble from intracellular vacuoles in vivo.
Makoto Kamei, W Brian Saunders, Kayla J Bayless, Louis Dye, George E Davis, Brant M Weinstein. Nature 2006
328
1

Quantitative measurement of neurological deficit after mild (30 min) transient middle cerebral artery occlusion in rats.
Kouji Wakayama, Munehisa Shimamura, Masataka Sata, Naoyuki Sato, Koji Kawakami, Hirotsugu Fukuda, Takuji Tomimatsu, Toshio Ogihara, Ryuichi Morishita. Brain Res 2007
10
10

Neutrophil recruitment to the brain in mouse and human ischemic stroke.
Isabel Perez-de-Puig, Francesc Miró-Mur, Maura Ferrer-Ferrer, Ellen Gelpi, Jordi Pedragosa, Carles Justicia, Xabier Urra, Angel Chamorro, Anna M Planas. Acta Neuropathol 2015
199
1

Effector T-cell trafficking between the leptomeninges and the cerebrospinal fluid.
Christian Schläger, Henrike Körner, Martin Krueger, Stefano Vidoli, Michael Haberl, Dorothee Mielke, Elke Brylla, Thomas Issekutz, Carlos Cabañas, Peter J Nelson,[...]. Nature 2016
189
1

Tissue macrophages act as cellular chaperones for vascular anastomosis downstream of VEGF-mediated endothelial tip cell induction.
Alessandro Fantin, Joaquim M Vieira, Gaia Gestri, Laura Denti, Quenten Schwarz, Sergey Prykhozhij, Francesca Peri, Stephen W Wilson, Christiana Ruhrberg. Blood 2010
648
1


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.