A citation-based method for searching scientific literature

Manuel Ascano, Neelanjan Mukherjee, Pradeep Bandaru, Jason B Miller, Jeffrey D Nusbaum, David L Corcoran, Christine Langlois, Mathias Munschauer, Scott Dewell, Markus Hafner, Zev Williams, Uwe Ohler, Thomas Tuschl. Nature 2012
Times Cited: 446







List of co-cited articles
1099 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Contribution of Rare Copy Number Variants to Bipolar Disorder Risk Is Limited to Schizoaffective Cases.
Alexander W Charney, Eli A Stahl, Elaine K Green, Chia-Yen Chen, Jennifer L Moran, Kimberly Chambert, Richard A Belliveau, Liz Forty, Katherine Gordon-Smith, Phil H Lee,[...]. Biol Psychiatry 2019
17
5

Disruption of the ASTN2/TRIM32 locus at 9q33.1 is a risk factor in males for autism spectrum disorders, ADHD and other neurodevelopmental phenotypes.
Anath C Lionel, Kristiina Tammimies, Andrea K Vaags, Jill A Rosenfeld, Joo Wook Ahn, Daniele Merico, Abdul Noor, Cassandra K Runke, Vamsee K Pillalamarri, Melissa T Carter,[...]. Hum Mol Genet 2014
96
1

CNVs of noncoding cis-regulatory elements in human disease.
Malte Spielmann, Eva Klopocki. Curr Opin Genet Dev 2013
32
3

The genetics of bipolar disorder.
Francis James A Gordovez, Francis J McMahon. Mol Psychiatry 2020
55
1

Non-coding genetic variants in human disease.
Feng Zhang, James R Lupski. Hum Mol Genet 2015
244
1


Technical standards for the interpretation and reporting of constitutional copy-number variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics (ACMG) and the Clinical Genome Resource (ClinGen).
Erin Rooney Riggs, Erica F Andersen, Athena M Cherry, Sibel Kantarci, Hutton Kearney, Ankita Patel, Gordana Raca, Deborah I Ritter, Sarah T South, Erik C Thorland,[...]. Genet Med 2020
287
1

Genome-wide Burden of Rare Short Deletions Is Enriched in Major Depressive Disorder in Four Cohorts.
Xianglong Zhang, Abdel Abdellaoui, James Rucker, Simone de Jong, James B Potash, Myrna M Weissman, Jianxin Shi, James A Knowles, Carlos Pato, Michele Pato,[...]. Biol Psychiatry 2019
13
7

Investigating Shared Genetic Basis Across Tourette Syndrome and Comorbid Neurodevelopmental Disorders Along the Impulsivity-Compulsivity Spectrum.
Zhiyu Yang, Hanrui Wu, Phil H Lee, Fotis Tsetsos, Lea K Davis, Dongmei Yu, Sang Hong Lee, Søren Dalsgaard, Jan Haavik, Csaba Barta,[...]. Biol Psychiatry 2021
8
12

Partial FMRP expression is sufficient to normalize neuronal hyperactivity in Fragile X neurons.
John D Graef, Hao Wu, Carrie Ng, Chicheng Sun, Vivian Villegas, Deena Qadir, Kimberly Jesseman, Stephen T Warren, Rudolf Jaenisch, Angela Cacace,[...]. Eur J Neurosci 2020
11
9

CHD2 haploinsufficiency is associated with developmental delay, intellectual disability, epilepsy and neurobehavioural problems.
Sébastien Chénier, Grace Yoon, Bob Argiropoulos, Julie Lauzon, Rachel Laframboise, Joo Wook Ahn, Caroline Mackie Ogilvie, Anath C Lionel, Christian R Marshall, Andrea K Vaags,[...]. J Neurodev Disord 2014
54
1

Human Astrocyte Maturation Captured in 3D Cerebral Cortical Spheroids Derived from Pluripotent Stem Cells.
Steven A Sloan, Spyros Darmanis, Nina Huber, Themasap A Khan, Fikri Birey, Christine Caneda, Richard Reimer, Stephen R Quake, Ben A Barres, Sergiu P Paşca. Neuron 2017
250
1

Generation of Functional Human 3D Cortico-Motor Assembloids.
Jimena Andersen, Omer Revah, Yuki Miura, Nicholas Thom, Neal D Amin, Kevin W Kelley, Mandeep Singh, Xiaoyu Chen, Mayuri Vijay Thete, Elisabeth M Walczak,[...]. Cell 2020
86
1


Cortical neurons derived from human pluripotent stem cells lacking FMRP display altered spontaneous firing patterns.
Shreya Das Sharma, Rakhi Pal, Bharath Kumar Reddy, Bhuvaneish T Selvaraj, Nisha Raj, Krishna Kumar Samaga, Durga J Srinivasan, Loren Ornelas, Dhruv Sareen, Matthew R Livesey,[...]. Mol Autism 2020
3
33


Epigenetic characterization of the FMR1 promoter in induced pluripotent stem cells from human fibroblasts carrying an unmethylated full mutation.
Celine E F de Esch, Mehrnaz Ghazvini, Friedemann Loos, Nune Schelling-Kazaryan, W Widagdo, Shashini T Munshi, Erik van der Wal, Hannie Douben, Nilhan Gunhanlar, Steven A Kushner,[...]. Stem Cell Reports 2014
36
2

Generation and assembly of human brain region-specific three-dimensional cultures.
Steven A Sloan, Jimena Andersen, Anca M Pașca, Fikri Birey, Sergiu P Pașca. Nat Protoc 2018
115
1

Molecular mechanisms underlying nucleotide repeat expansion disorders.
Indranil Malik, Chase P Kelley, Eric T Wang, Peter K Todd. Nat Rev Mol Cell Biol 2021
19
5

Metabotropic glutamate receptor 5 responses dictate differentiation of neural progenitors to NMDA-responsive cells in fragile X syndrome.
Venkat Swaroop Achuta, Heli Grym, Noora Putkonen, Verna Louhivuori, Virve Kärkkäinen, Jari Koistinaho, Laurent Roybon, Maija L Castrén. Dev Neurobiol 2017
25
4

Fragile X syndrome and associated disorders: Clinical aspects and pathology.
Maria Jimena Salcedo-Arellano, Brett Dufour, Yingratana McLennan, Veronica Martinez-Cerdeno, Randi Hagerman. Neurobiol Dis 2020
38
2

Glutamate enhances proliferation and neurogenesis in human neural progenitor cell cultures derived from the fetal cortex.
Masatoshi Suzuki, Aaron D Nelson, Joshua B Eickstaedt, Kyle Wallace, Lynda S Wright, Clive N Svendsen. Eur J Neurosci 2006
82
1

FMR1 Reactivating Treatments in Fragile X iPSC-Derived Neural Progenitors In Vitro and In Vivo.
Dan Vershkov, Nina Fainstein, Sapir Suissa, Tamar Golan-Lev, Tamir Ben-Hur, Nissim Benvenisty. Cell Rep 2019
20
5

Generation of thalamic neurons from mouse embryonic stem cells.
Atsushi Shiraishi, Keiko Muguruma, Yoshiki Sasai. Development 2017
23
4

Targeted Reactivation of FMR1 Transcription in Fragile X Syndrome Embryonic Stem Cells.
Jill M Haenfler, Geena Skariah, Caitlin M Rodriguez, Andre Monteiro da Rocha, Jack M Parent, Gary D Smith, Peter K Todd. Front Mol Neurosci 2018
25
4

Reversion of FMR1 Methylation and Silencing by Editing the Triplet Repeats in Fragile X iPSC-Derived Neurons.
Chul-Yong Park, Tomer Halevy, Dongjin R Lee, Jin Jea Sung, Jae Souk Lee, Ofra Yanuka, Nissim Benvenisty, Dong-Wook Kim. Cell Rep 2015
112
1

Human Pluripotent Stem Cell-Derived Neural Cells and Brain Organoids Reveal SARS-CoV-2 Neurotropism Predominates in Choroid Plexus Epithelium.
Fadi Jacob, Sarshan R Pather, Wei-Kai Huang, Feng Zhang, Samuel Zheng Hao Wong, Haowen Zhou, Beatrice Cubitt, Wenqiang Fan, Catherine Z Chen, Miao Xu,[...]. Cell Stem Cell 2020
147
1

Molecular Mechanisms Driving mRNA Degradation by m6A Modification.
Yujin Lee, Junho Choe, Ok Hyun Park, Yoon Ki Kim. Trends Genet 2020
95
1

Generation of cerebral organoids from human pluripotent stem cells.
Madeline A Lancaster, Juergen A Knoblich. Nat Protoc 2014
624
1

FOXG1-Dependent Dysregulation of GABA/Glutamate Neuron Differentiation in Autism Spectrum Disorders.
Jessica Mariani, Gianfilippo Coppola, Ping Zhang, Alexej Abyzov, Lauren Provini, Livia Tomasini, Mariangela Amenduni, Anna Szekely, Dean Palejev, Michael Wilson,[...]. Cell 2015
585
1


Rescue of Fragile X Syndrome Neurons by DNA Methylation Editing of the FMR1 Gene.
X Shawn Liu, Hao Wu, Marine Krzisch, Xuebing Wu, John Graef, Julien Muffat, Denes Hnisz, Charles H Li, Bingbing Yuan, Chuanyun Xu,[...]. Cell 2018
199
1

Developmental study of fragile X syndrome using human embryonic stem cells derived from preimplantation genetically diagnosed embryos.
Rachel Eiges, Achia Urbach, Mira Malcov, Tsvia Frumkin, Tamar Schwartz, Ami Amit, Yuval Yaron, Amir Eden, Ofra Yanuka, Nissim Benvenisty,[...]. Cell Stem Cell 2007
204
1

Cerebral organoids model human brain development and microcephaly.
Madeline A Lancaster, Magdalena Renner, Carol-Anne Martin, Daniel Wenzel, Louise S Bicknell, Matthew E Hurles, Tessa Homfray, Josef M Penninger, Andrew P Jackson, Juergen A Knoblich. Nature 2013
1

Human cerebral organoids recapitulate gene expression programs of fetal neocortex development.
J Gray Camp, Farhath Badsha, Marta Florio, Sabina Kanton, Tobias Gerber, Michaela Wilsch-Bräuninger, Eric Lewitus, Alex Sykes, Wulf Hevers, Madeline Lancaster,[...]. Proc Natl Acad Sci U S A 2015
501
1

Cerebral Organoids Recapitulate Epigenomic Signatures of the Human Fetal Brain.
Chongyuan Luo, Madeline A Lancaster, Rosa Castanon, Joseph R Nery, Juergen A Knoblich, Joseph R Ecker. Cell Rep 2016
167
1

CGG Repeat-Induced FMR1 Silencing Depends on the Expansion Size in Human iPSCs and Neurons Carrying Unmethylated Full Mutations.
Urszula Brykczynska, Eline Pecho-Vrieseling, Anke Thiemeyer, Jessica Klein, Isabelle Fruh, Thierry Doll, Carole Manneville, Sascha Fuchs, Mariavittoria Iazeolla, Martin Beibel,[...]. Stem Cell Reports 2016
16
6

Single-cell genomic analysis of human cerebral organoids.
Sabina Kanton, Barbara Treutlein, J Gray Camp. Methods Cell Biol 2020
7
14

Long-term maturation of human cortical organoids matches key early postnatal transitions.
Aaron Gordon, Se-Jin Yoon, Stephen S Tran, Christopher D Makinson, Jin Young Park, Jimena Andersen, Alfredo M Valencia, Steve Horvath, Xinshu Xiao, John R Huguenard,[...]. Nat Neurosci 2021
42
2

Regional FMRP deficits and large repeat expansions into the full mutation range in a new Fragile X premutation mouse model.
Ali Entezam, Rea Biacsi, Bonnie Orrison, Tapas Saha, Gloria E Hoffman, Ed Grabczyk, Robert L Nussbaum, Karen Usdin. Gene 2007
144
1

Organoid single-cell genomic atlas uncovers human-specific features of brain development.
Sabina Kanton, Michael James Boyle, Zhisong He, Malgorzata Santel, Anne Weigert, Fátima Sanchís-Calleja, Patricia Guijarro, Leila Sidow, Jonas Simon Fleck, Dingding Han,[...]. Nature 2019
207
1

REST and its corepressors mediate plasticity of neuronal gene chromatin throughout neurogenesis.
Nurit Ballas, Christopher Grunseich, Diane D Lu, Joan C Speh, Gail Mandel. Cell 2005
667
1

Human induced pluripotent stem cell-derived glial cells and neural progenitors display divergent responses to Zika and dengue infections.
Julien Muffat, Yun Li, Attya Omer, Ann Durbin, Irene Bosch, Grisilda Bakiasi, Edward Richards, Aaron Meyer, Lee Gehrke, Rudolf Jaenisch. Proc Natl Acad Sci U S A 2018
58
1

Development of the cerebral cortex and the effect of the intrauterine environment.
Sebastian Quezada, Margie Castillo-Melendez, David W Walker, Mary Tolcos. J Physiol 2018
14
7

Cell-type-specific profiling of human cellular models of fragile X syndrome reveal PI3K-dependent defects in translation and neurogenesis.
Nisha Raj, Zachary T McEachin, William Harousseau, Ying Zhou, Feiran Zhang, Megan E Merritt-Garza, J Matthew Taliaferro, Magdalena Kalinowska, Samuele G Marro, Chadwick M Hales,[...]. Cell Rep 2021
6
16

Generation of the Human Pluripotent Stem-Cell-Derived Astrocyte Model with Forebrain Identity.
Ulla-Kaisa Peteri, Juho Pitkonen, Kagistia Hana Utami, Jere Paavola, Laurent Roybon, Mahmoud A Pouladi, Maija L Castrén. Brain Sci 2021
4
25

Generation of human vascularized brain organoids.
Missy T Pham, Kari M Pollock, Melanie D Rose, Whitney A Cary, Heather R Stewart, Ping Zhou, Jan A Nolta, Ben Waldau. Neuroreport 2018
206
1

Identification of neural oscillations and epileptiform changes in human brain organoids.
Ranmal A Samarasinghe, Osvaldo A Miranda, Jessie E Buth, Simon Mitchell, Isabella Ferando, Momoko Watanabe, Thomas F Allison, Arinnae Kurdian, Namie N Fotion, Michael J Gandal,[...]. Nat Neurosci 2021
18
5

CHD2 is Required for Embryonic Neurogenesis in the Developing Cerebral Cortex.
Tianjin Shen, Fen Ji, Zengqiang Yuan, Jianwei Jiao. Stem Cells 2015
45
2



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.