A citation-based method for searching scientific literature

Shane E McCarthy, Vladimir Makarov, George Kirov, Anjene M Addington, Jon McClellan, Seungtai Yoon, Diana O Perkins, Diane E Dickel, Mary Kusenda, Olga Krastoshevsky, Verena Krause, Ravinesh A Kumar, Detelina Grozeva, Dheeraj Malhotra, Tom Walsh, Elaine H Zackai, Paige Kaplan, Jaya Ganesh, Ian D Krantz, Nancy B Spinner, Patricia Roccanova, Abhishek Bhandari, Kevin Pavon, B Lakshmi, Anthony Leotta, Jude Kendall, Yoon-Ha Lee, Vladimir Vacic, Sydney Gary, Lilia M Iakoucheva, Timothy J Crow, Susan L Christian, Jeffrey A Lieberman, T Scott Stroup, Terho Lehtimäki, Kaija Puura, Chad Haldeman-Englert, Justin Pearl, Meredith Goodell, Virginia L Willour, Pamela Derosse, Jo Steele, Layla Kassem, Jessica Wolff, Nisha Chitkara, Francis J McMahon, Anil K Malhotra, James B Potash, Thomas G Schulze, Markus M Nöthen, Sven Cichon, Marcella Rietschel, Ellen Leibenluft, Vlad Kustanovich, Clara M Lajonchere, James S Sutcliffe, David Skuse, Michael Gill, Louise Gallagher, Nancy R Mendell, Nick Craddock, Michael J Owen, Michael C O'Donovan, Tamim H Shaikh, Ezra Susser, Lynn E Delisi, Patrick F Sullivan, Curtis K Deutsch, Judith Rapoport, Deborah L Levy, Mary-Claire King, Jonathan Sebat. Nat Genet 2009
Times Cited: 472







List of co-cited articles
945 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Identification of ADH4 as a novel and potential prognostic marker in hepatocellular carcinoma.
Rong-Rong Wei, Mei-Yin Zhang, Hui-Lan Rao, Heng-Ying Pu, Hui-Zhong Zhang, Hui-Yun Wang. Med Oncol 2012
34
2

DeepLGP: a novel deep learning method for prioritizing lncRNA target genes.
Tianyi Zhao, Yang Hu, Jiajie Peng, Liang Cheng. Bioinformatics 2020
15
6

EXPERIMENTAL GINGIVITIS IN MAN.
H LOE, E THEILADE, S B JENSEN. J Periodontol 1965
1

An overview of SNP interactions in genome-wide association studies.
Pei Li, Maozu Guo, Chunyu Wang, Xiaoyan Liu, Quan Zou. Brief Funct Genomics 2015
54
1


Transcriptomes in healthy and diseased gingival tissues.
Ryan T Demmer, Jan H Behle, Dana L Wolf, Martin Handfield, Moritz Kebschull, Romanita Celenti, Paul Pavlidis, Panos N Papapanou. J Periodontol 2008
96
1

Pro54DB: a database for experimentally verified sigma-54 promoters.
Zhi-Yong Liang, Hong-Yan Lai, Huan Yang, Chang-Jian Zhang, Hui Yang, Huan-Huan Wei, Xin-Xin Chen, Ya-Wei Zhao, Zhen-Dong Su, Wen-Chao Li,[...]. Bioinformatics 2017
67
1

A computational platform to identify origins of replication sites in eukaryotes.
Fu-Ying Dao, Hao Lv, Hasan Zulfiqar, Hui Yang, Wei Su, Hui Gao, Hui Ding, Hao Lin. Brief Bioinform 2021
28
3

Exposure to formaldehyde and phenol during an anatomy dissecting course: sensitizing potency of formaldehyde in medical students.
F Wantke, M Focke, W Hemmer, R Bracun, S Wolf-Abdolvahab, M Götz, R Jarisch, M Götz, M Tschabitscher, M Gann,[...]. Allergy 2000
43
2

Transcriptome sequencing of gingival biopsies from chronic periodontitis patients reveals novel gene expression and splicing patterns.
Yong-Gun Kim, Minjung Kim, Ji Hyun Kang, Hyo Jeong Kim, Jin-Woo Park, Jae-Mok Lee, Jo-Young Suh, Jae-Young Kim, Jae-Hyung Lee, Youngkyun Lee. Hum Genomics 2016
14
7

Vitamin A, infection, and immune function.
C B Stephensen. Annu Rev Nutr 2001
423
1

Predicting Diabetes Mellitus With Machine Learning Techniques.
Quan Zou, Kaiyang Qu, Yamei Luo, Dehui Yin, Ying Ju, Hua Tang. Front Genet 2018
63
1

The Novel ASIC2 Locus is Associated with Severe Gingival Inflammation.
Shaoping Zhang, Kimon Divaris, Kevin Moss, Ning Yu, Silvana Barros, Julie Marchesan, Thiago Morelli, Cary Agler, Steven J Kim, Di Wu,[...]. JDR Clin Trans Res 2016
8
12

Clinical implications of the solitary functioning kidney.
Rik Westland, Michiel F Schreuder, Johannes B van Goudoever, Simone Sanna-Cherchi, Joanna A E van Wijk. Clin J Am Soc Nephrol 2014
47
2


The endogenous tryptophan metabolite and NAD+ precursor quinolinic acid confers resistance of gliomas to oxidative stress.
Felix Sahm, Iris Oezen, Christiane A Opitz, Bernhard Radlwimmer, Andreas von Deimling, Tilman Ahrendt, Seray Adams, Helge B Bode, Gilles J Guillemin, Wolfgang Wick,[...]. Cancer Res 2013
74
1

Identification of copy number variations associated with congenital heart disease by chromosomal microarray analysis and next-generation sequencing.
Xiangyu Zhu, Jie Li, Tong Ru, Yaping Wang, Yan Xu, Ying Yang, Xing Wu, David S Cram, Yali Hu. Prenat Diagn 2016
37
2

Analysis of the Human Tissue-specific Expression by Genome-wide Integration of Transcriptomics and Antibody-based Proteomics.
Linn Fagerberg, Björn M Hallström, Per Oksvold, Caroline Kampf, Dijana Djureinovic, Jacob Odeberg, Masato Habuka, Simin Tahmasebpoor, Angelika Danielsson, Karolina Edlund,[...]. Mol Cell Proteomics 2014
371
1

Anti-apoptotic quinolinate phosphoribosyltransferase (QPRT) is a target gene of Wilms' tumor gene 1 (WT1) protein in leukemic cells.
Tove Ullmark, Giorgia Montano, Linnea Järvstråt, Helena Jernmark Nilsson, Erik Håkansson, Kristina Drott, Björn Nilsson, Karina Vidovic, Urban Gullberg. Biochem Biophys Res Commun 2017
14
7

Establishment of true niacin deficiency in quinolinic acid phosphoribosyltransferase knockout mice.
Miki Terakata, Tsutomu Fukuwatari, Mitsue Sano, Natsuki Nakao, Ryuzo Sasaki, Shin-Ichi Fukuoka, Katsumi Shibata. J Nutr 2012
28
3

A novel Wilms tumor 1 (WT1) target gene negatively regulates the WNT signaling pathway.
Myoung Shin Kim, Seung Kew Yoon, Frank Bollig, Jirouta Kitagaki, Wonhee Hur, Nathan J Whye, Yun-Ping Wu, Miguel N Rivera, Jik Young Park, Ho-Shik Kim,[...]. J Biol Chem 2010
68
1

Genetic, environmental, and epigenetic factors involved in CAKUT.
Nayia Nicolaou, Kirsten Y Renkema, Ernie M H F Bongers, Rachel H Giles, Nine V A M Knoers. Nat Rev Nephrol 2015
113
1

Analysis of the human tissue-specific expression by genome-wide integration of transcriptomics and antibody-based proteomics.
Linn Fagerberg, Björn M Hallström, Per Oksvold, Caroline Kampf, Dijana Djureinovic, Jacob Odeberg, Masato Habuka, Simin Tahmasebpoor, Angelika Danielsson, Karolina Edlund,[...]. Mol Cell Proteomics 2014
1

Wnt-4 signaling is involved in the control of smooth muscle cell fate via Bmp-4 in the medullary stroma of the developing kidney.
Petri Itäranta, Lijun Chi, Tiina Seppänen, Mikael Niku, Juha Tuukkanen, Hellevi Peltoketo, Seppo Vainio. Dev Biol 2006
40
2

DGCR6 at the proximal part of the DiGeorge critical region is involved in conotruncal heart defects.
Wenming Gao, Takashi Higaki, Minenori Eguchi-Ishimae, Hidehiko Iwabuki, Zhouying Wu, Eiichi Yamamoto, Hidemi Takata, Masaaki Ohta, Issei Imoto, Eiichi Ishii,[...]. Hum Genome Var 2015
13
7

Loss of the Chr16p11.2 ASD candidate gene QPRT leads to aberrant neuronal differentiation in the SH-SY5Y neuronal cell model.
Denise Haslinger, Regina Waltes, Afsheen Yousaf, Silvia Lindlar, Ines Schneider, Chai K Lim, Meng-Miao Tsai, Boyan K Garvalov, Amparo Acker-Palmer, Nicolas Krezdorn,[...]. Mol Autism 2018
10
10

16p11.2 transcription factor MAZ is a dosage-sensitive regulator of genitourinary development.
Meade Haller, Jason Au, Marisol O'Neill, Dolores J Lamb. Proc Natl Acad Sci U S A 2018
15
6

NAD Deficiency, Congenital Malformations, and Niacin Supplementation.
Hongjun Shi, Annabelle Enriquez, Melissa Rapadas, Ella M M A Martin, Roni Wang, Julie Moreau, Chai K Lim, Justin O Szot, Eddie Ip, James N Hughes,[...]. N Engl J Med 2017
82
1

De novo NAD+ biosynthetic impairment in acute kidney injury in humans.
Ali Poyan Mehr, Mei T Tran, Kenneth M Ralto, David E Leaf, Vaughan Washco, Joseph Messmer, Adam Lerner, Ajay Kher, Steven H Kim, Charbel C Khoury,[...]. Nat Med 2018
91
1

Understanding kidney morphogenesis to guide renal tissue regeneration.
Melissa H Little, Alexander N Combes, Minoru Takasato. Nat Rev Nephrol 2016
26
3

Coordination of kidney organogenesis by Wnt signaling.
Kimmo Halt, Seppo Vainio. Pediatr Nephrol 2014
43
2

Exome-wide Association Study Identifies GREB1L Mutations in Congenital Kidney Malformations.
Simone Sanna-Cherchi, Kamal Khan, Rik Westland, Priya Krithivasan, Lorraine Fievet, Hila Milo Rasouly, Iuliana Ionita-Laza, Valentina P Capone, David A Fasel, Krzysztof Kiryluk,[...]. Am J Hum Genet 2017
10
10

Quinolinate phosphoribosyl transferase, a key enzyme in de novo NAD(+) synthesis, suppresses spontaneous cell death by inhibiting overproduction of active-caspase-3.
Kazumi Ishidoh, Norio Kamemura, Takahito Imagawa, Masataka Oda, Jun Sakurai, Nobuhiko Katunuma. Biochim Biophys Acta 2010
22
4

NAD+ homeostasis in renal health and disease.
Kenneth M Ralto, Eugene P Rhee, Samir M Parikh. Nat Rev Nephrol 2020
33
3

Impairment of Wnt11 function leads to kidney tubular abnormalities and secondary glomerular cystogenesis.
Irina I Nagy, Qi Xu, Florence Naillat, Nsrein Ali, Ilkka Miinalainen, Anatoly Samoylenko, Seppo J Vainio. BMC Dev Biol 2016
10
10


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.