M E Massari, C Murre. Mol Cell Biol 2000
Times Cited: 1286
Times Cited: 1286
Times Cited
Times Co-cited
Similarity
The Arabidopsis basic/helix-loop-helix transcription factor family.
Gabriela Toledo-Ortiz, Enamul Huq, Peter H Quail. Plant Cell 2003
Gabriela Toledo-Ortiz, Enamul Huq, Peter H Quail. Plant Cell 2003
26
A new DNA binding and dimerization motif in immunoglobulin enhancer binding, daughterless, MyoD, and myc proteins.
C Murre, P S McCaw, D Baltimore. Cell 1989
C Murre, P S McCaw, D Baltimore. Cell 1989
18
Genome-wide identification and characterization of the bHLH gene family in tomato.
Hua Sun, Hua-Jie Fan, Hong-Qing Ling. BMC Genomics 2015
Hua Sun, Hua-Jie Fan, Hong-Qing Ling. BMC Genomics 2015
17
Genome-wide classification and evolutionary analysis of the bHLH family of transcription factors in Arabidopsis, poplar, rice, moss, and algae.
Lorenzo Carretero-Paulet, Anahit Galstyan, Irma Roig-Villanova, Jaime F Martínez-García, Jose R Bilbao-Castro, David L Robertson. Plant Physiol 2010
Lorenzo Carretero-Paulet, Anahit Galstyan, Irma Roig-Villanova, Jaime F Martínez-García, Jose R Bilbao-Castro, David L Robertson. Plant Physiol 2010
17
Genome-wide analysis of basic/helix-loop-helix transcription factor family in rice and Arabidopsis.
Xiaoxing Li, Xuepeng Duan, Haixiong Jiang, Yujin Sun, Yuanping Tang, Zheng Yuan, Jingkang Guo, Wanqi Liang, Liang Chen, Jingyuan Yin,[...]. Plant Physiol 2006
Xiaoxing Li, Xuepeng Duan, Haixiong Jiang, Yujin Sun, Yuanping Tang, Zheng Yuan, Jingkang Guo, Wanqi Liang, Liang Chen, Jingyuan Yin,[...]. Plant Physiol 2006
16
The basic helix-loop-helix protein family: comparative genomics and phylogenetic analysis.
V Ledent, M Vervoort. Genome Res 2001
V Ledent, M Vervoort. Genome Res 2001
16
Evolutionary and comparative analysis of MYB and bHLH plant transcription factors.
Antje Feller, Katja Machemer, Edward L Braun, Erich Grotewold. Plant J 2011
Antje Feller, Katja Machemer, Edward L Braun, Erich Grotewold. Plant J 2011
15
A natural classification of the basic helix-loop-helix class of transcription factors.
W R Atchley, W M Fitch. Proc Natl Acad Sci U S A 1997
W R Atchley, W M Fitch. Proc Natl Acad Sci U S A 1997
15
Origin and diversification of basic-helix-loop-helix proteins in plants.
Nuno Pires, Liam Dolan. Mol Biol Evol 2010
Nuno Pires, Liam Dolan. Mol Biol Evol 2010
13
The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity.
Marc A Heim, Marc Jakoby, Martin Werber, Cathie Martin, Bernd Weisshaar, Paul C Bailey. Mol Biol Evol 2003
Marc A Heim, Marc Jakoby, Martin Werber, Cathie Martin, Bernd Weisshaar, Paul C Bailey. Mol Biol Evol 2003
12
Helix-loop-helix proteins and the advent of cellular diversity: 30 years of discovery.
Cornelis Murre. Genes Dev 2019
Cornelis Murre. Genes Dev 2019
19
E Proteins and ID Proteins: Helix-Loop-Helix Partners in Development and Disease.
Lan-Hsin Wang, Nicholas E Baker. Dev Cell 2015
Lan-Hsin Wang, Nicholas E Baker. Dev Cell 2015
11
Interactions between heterologous helix-loop-helix proteins generate complexes that bind specifically to a common DNA sequence.
C Murre, P S McCaw, H Vaessin, M Caudy, L Y Jan, Y N Jan, C V Cabrera, J N Buskin, S D Hauschka, A B Lassar. Cell 1989
C Murre, P S McCaw, H Vaessin, M Caudy, L Y Jan, Y N Jan, C V Cabrera, J N Buskin, S D Hauschka, A B Lassar. Cell 1989
11
The protein Id: a negative regulator of helix-loop-helix DNA binding proteins.
R Benezra, R L Davis, D Lockshon, D L Turner, H Weintraub. Cell 1990
R Benezra, R L Davis, D Lockshon, D L Turner, H Weintraub. Cell 1990
10
Genome Wide Identification and Characterization of Apple bHLH Transcription Factors and Expression Analysis in Response to Drought and Salt Stress.
Ke Mao, Qinglong Dong, Chao Li, Changhai Liu, Fengwang Ma. Front Plant Sci 2017
Ke Mao, Qinglong Dong, Chao Li, Changhai Liu, Fengwang Ma. Front Plant Sci 2017
12
Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method.
K J Livak, T D Schmittgen. Methods 2001
K J Livak, T D Schmittgen. Methods 2001
10
TBtools: An Integrative Toolkit Developed for Interactive Analyses of Big Biological Data.
Chengjie Chen, Hao Chen, Yi Zhang, Hannah R Thomas, Margaret H Frank, Yehua He, Rui Xia. Mol Plant 2020
Chengjie Chen, Hao Chen, Yi Zhang, Hannah R Thomas, Margaret H Frank, Yehua He, Rui Xia. Mol Plant 2020
9
Positional dependence, cliques, and predictive motifs in the bHLH protein domain.
W R Atchley, W Terhalle, A Dress. J Mol Evol 1999
W R Atchley, W Terhalle, A Dress. J Mol Evol 1999
9
Functional diversity of human basic helix-loop-helix transcription factor TCF4 isoforms generated by alternative 5' exon usage and splicing.
Mari Sepp, Kaja Kannike, Ave Eesmaa, Mari Urb, Tõnis Timmusk. PLoS One 2011
Mari Sepp, Kaja Kannike, Ave Eesmaa, Mari Urb, Tõnis Timmusk. PLoS One 2011
8
MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets.
Sudhir Kumar, Glen Stecher, Koichiro Tamura. Mol Biol Evol 2016
Sudhir Kumar, Glen Stecher, Koichiro Tamura. Mol Biol Evol 2016
8
MEME SUITE: tools for motif discovery and searching.
Timothy L Bailey, Mikael Boden, Fabian A Buske, Martin Frith, Charles E Grant, Luca Clementi, Jingyuan Ren, Wilfred W Li, William S Noble. Nucleic Acids Res 2009
Timothy L Bailey, Mikael Boden, Fabian A Buske, Martin Frith, Charles E Grant, Luca Clementi, Jingyuan Ren, Wilfred W Li, William S Noble. Nucleic Acids Res 2009
8
Crystal structure of PHO4 bHLH domain-DNA complex: flanking base recognition.
T Shimizu, A Toumoto, K Ihara, M Shimizu, Y Kyogoku, N Ogawa, Y Oshima, T Hakoshima. EMBO J 1997
T Shimizu, A Toumoto, K Ihara, M Shimizu, Y Kyogoku, N Ogawa, Y Oshima, T Hakoshima. EMBO J 1997
8
MCScanX: a toolkit for detection and evolutionary analysis of gene synteny and collinearity.
Yupeng Wang, Haibao Tang, Jeremy D Debarry, Xu Tan, Jingping Li, Xiyin Wang, Tae-ho Lee, Huizhe Jin, Barry Marler, Hui Guo,[...]. Nucleic Acids Res 2012
Yupeng Wang, Haibao Tang, Jeremy D Debarry, Xu Tan, Jingping Li, Xiyin Wang, Tae-ho Lee, Huizhe Jin, Barry Marler, Hui Guo,[...]. Nucleic Acids Res 2012
8
The Psychiatric Risk Gene Transcription Factor 4 (TCF4) Regulates Neurodevelopmental Pathways Associated With Schizophrenia, Autism, and Intellectual Disability.
Marc P Forrest, Matthew J Hill, David H Kavanagh, Katherine E Tansey, Adrian J Waite, Derek J Blake. Schizophr Bull 2018
Marc P Forrest, Matthew J Hill, David H Kavanagh, Katherine E Tansey, Adrian J Waite, Derek J Blake. Schizophr Bull 2018
14
Crystal structure of transcription factor E47: E-box recognition by a basic region helix-loop-helix dimer.
T Ellenberger, D Fass, M Arnaud, S C Harrison. Genes Dev 1994
T Ellenberger, D Fass, M Arnaud, S C Harrison. Genes Dev 1994
7
The bHLH genes GLABRA3 (GL3) and ENHANCER OF GLABRA3 (EGL3) specify epidermal cell fate in the Arabidopsis root.
Christine Bernhardt, Myeong Min Lee, Antonio Gonzalez, Fan Zhang, Alan Lloyd, John Schiefelbein. Development 2003
Christine Bernhardt, Myeong Min Lee, Antonio Gonzalez, Fan Zhang, Alan Lloyd, John Schiefelbein. Development 2003
7
Structure and function of helix-loop-helix proteins.
C Murre, G Bain, M A van Dijk, I Engel, B A Furnari, M E Massari, J R Matthews, M W Quong, R R Rivera, M H Stuiver. Biochim Biophys Acta 1994
C Murre, G Bain, M A van Dijk, I Engel, B A Furnari, M E Massari, J R Matthews, M W Quong, R R Rivera, M H Stuiver. Biochim Biophys Acta 1994
7
Genome-wide analysis of the bHLH transcription factor family in Chinese cabbage (Brassica rapa ssp. pekinensis).
Xiao-Ming Song, Zhi-Nan Huang, Wei-Ke Duan, Jun Ren, Tong-Kun Liu, Ying Li, Xi-Lin Hou. Mol Genet Genomics 2014
Xiao-Ming Song, Zhi-Nan Huang, Wei-Ke Duan, Jun Ren, Tong-Kun Liu, Ying Li, Xi-Lin Hou. Mol Genet Genomics 2014
11
Crystal structure of E47-NeuroD1/beta2 bHLH domain-DNA complex: heterodimer selectivity and DNA recognition.
Antonella Longo, Gerald P Guanga, Robert B Rose. Biochemistry 2008
Antonella Longo, Gerald P Guanga, Robert B Rose. Biochemistry 2008
8
Update on the basic helix-loop-helix transcription factor gene family in Arabidopsis thaliana.
Paul C Bailey, Cathie Martin, Gabriela Toledo-Ortiz, Peter H Quail, Enamul Huq, Marc A Heim, Marc Jakoby, Martin Werber, Bernd Weisshaar. Plant Cell 2003
Paul C Bailey, Cathie Martin, Gabriela Toledo-Ortiz, Peter H Quail, Enamul Huq, Marc A Heim, Marc Jakoby, Martin Werber, Bernd Weisshaar. Plant Cell 2003
6
The TT8 gene encodes a basic helix-loop-helix domain protein required for expression of DFR and BAN genes in Arabidopsis siliques.
N Nesi, I Debeaujon, C Jond, G Pelletier, M Caboche, L Lepiniec. Plant Cell 2000
N Nesi, I Debeaujon, C Jond, G Pelletier, M Caboche, L Lepiniec. Plant Cell 2000
6
Tcf4 Regulates Synaptic Plasticity, DNA Methylation, and Memory Function.
Andrew J Kennedy, Elizabeth J Rahn, Brynna S Paulukaitis, Katherine E Savell, Holly B Kordasiewicz, Jing Wang, John W Lewis, Jessica Posey, Sarah K Strange, Mikael C Guzman-Karlsson,[...]. Cell Rep 2016
Andrew J Kennedy, Elizabeth J Rahn, Brynna S Paulukaitis, Katherine E Savell, Holly B Kordasiewicz, Jing Wang, John W Lewis, Jessica Posey, Sarah K Strange, Mikael C Guzman-Karlsson,[...]. Cell Rep 2016
7
Analysis of the expression pattern of the schizophrenia-risk and intellectual disability gene TCF4 in the developing and adult brain suggests a role in development and plasticity of cortical and hippocampal neurons.
Matthias Jung, Benjamin M Häberle, Tristan Tschaikowsky, Marie-Theres Wittmann, Elli-Anna Balta, Vivien-Charlott Stadler, Christiane Zweier, Arnd Dörfler, Christian Johannes Gloeckner, D Chichung Lie. Mol Autism 2018
Matthias Jung, Benjamin M Häberle, Tristan Tschaikowsky, Marie-Theres Wittmann, Elli-Anna Balta, Vivien-Charlott Stadler, Christiane Zweier, Arnd Dörfler, Christian Johannes Gloeckner, D Chichung Lie. Mol Autism 2018
17
Pitt-Hopkins syndrome-associated mutations in TCF4 lead to variable impairment of the transcription factor function ranging from hypomorphic to dominant-negative effects.
Mari Sepp, Priit Pruunsild, Tõnis Timmusk. Hum Mol Genet 2012
Mari Sepp, Priit Pruunsild, Tõnis Timmusk. Hum Mol Genet 2012
8
ICE1: a regulator of cold-induced transcriptome and freezing tolerance in Arabidopsis.
Viswanathan Chinnusamy, Masaru Ohta, Siddhartha Kanrar, Byeong-Ha Lee, Xuhui Hong, Manu Agarwal, Jian-Kang Zhu. Genes Dev 2003
Viswanathan Chinnusamy, Masaru Ohta, Siddhartha Kanrar, Byeong-Ha Lee, Xuhui Hong, Manu Agarwal, Jian-Kang Zhu. Genes Dev 2003
6
Interaction of shade avoidance and auxin responses: a role for two novel atypical bHLH proteins.
Irma Roig-Villanova, Jordi Bou-Torrent, Anahit Galstyan, Lorenzo Carretero-Paulet, Sergi Portolés, Manuel Rodríguez-Concepción, Jaime F Martínez-García. EMBO J 2007
Irma Roig-Villanova, Jordi Bou-Torrent, Anahit Galstyan, Lorenzo Carretero-Paulet, Sergi Portolés, Manuel Rodríguez-Concepción, Jaime F Martínez-García. EMBO J 2007
6
Crystal structure of MyoD bHLH domain-DNA complex: perspectives on DNA recognition and implications for transcriptional activation.
P C Ma, M A Rould, H Weintraub, C O Pabo. Cell 1994
P C Ma, M A Rould, H Weintraub, C O Pabo. Cell 1994
6
Three redundant brassinosteroid early response genes encode putative bHLH transcription factors required for normal growth.
Danielle M Friedrichsen, Jennifer Nemhauser, Takamichi Muramitsu, Julin N Maloof, José Alonso, Joseph R Ecker, Masaki Furuya, Joanne Chory. Genetics 2002
Danielle M Friedrichsen, Jennifer Nemhauser, Takamichi Muramitsu, Julin N Maloof, José Alonso, Joseph R Ecker, Masaki Furuya, Joanne Chory. Genetics 2002
6
The HECATE genes regulate female reproductive tract development in Arabidopsis thaliana.
Kristina Gremski, Gary Ditta, Martin F Yanofsky. Development 2007
Kristina Gremski, Gary Ditta, Martin F Yanofsky. Development 2007
6
Genome-Wide Characterization of bHLH Genes in Grape and Analysis of their Potential Relevance to Abiotic Stress Tolerance and Secondary Metabolite Biosynthesis.
Pengfei Wang, Ling Su, Huanhuan Gao, Xilong Jiang, Xinying Wu, Yi Li, Qianqian Zhang, Yongmei Wang, Fengshan Ren. Front Plant Sci 2018
Pengfei Wang, Ling Su, Huanhuan Gao, Xilong Jiang, Xinying Wu, Yi Li, Qianqian Zhang, Yongmei Wang, Fengshan Ren. Front Plant Sci 2018
13
PlantCARE, a database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences.
Magali Lescot, Patrice Déhais, Gert Thijs, Kathleen Marchal, Yves Moreau, Yves Van de Peer, Pierre Rouzé, Stephane Rombauts. Nucleic Acids Res 2002
Magali Lescot, Patrice Déhais, Gert Thijs, Kathleen Marchal, Yves Moreau, Yves Van de Peer, Pierre Rouzé, Stephane Rombauts. Nucleic Acids Res 2002
6
Two distinct transcription factors that bind the immunoglobulin enhancer microE5/kappa 2 motif.
P Henthorn, M Kiledjian, T Kadesch. Science 1990
P Henthorn, M Kiledjian, T Kadesch. Science 1990
5
Mutations in TCF4, encoding a class I basic helix-loop-helix transcription factor, are responsible for Pitt-Hopkins syndrome, a severe epileptic encephalopathy associated with autonomic dysfunction.
Jeanne Amiel, Marlene Rio, Loic de Pontual, Richard Redon, Valerie Malan, Nathalie Boddaert, Perrine Plouin, Nigel P Carter, Stanislas Lyonnet, Arnold Munnich,[...]. Am J Hum Genet 2007
Jeanne Amiel, Marlene Rio, Loic de Pontual, Richard Redon, Valerie Malan, Nathalie Boddaert, Perrine Plouin, Nigel P Carter, Stanislas Lyonnet, Arnold Munnich,[...]. Am J Hum Genet 2007
5
Arabidopsis AtbHLH112 regulates the expression of genes involved in abiotic stress tolerance by binding to their E-box and GCG-box motifs.
Yujia Liu, Xiaoyu Ji, Xianguang Nie, Min Qu, Lei Zheng, Zilong Tan, Huimin Zhao, Lin Huo, Shengnan Liu, Bing Zhang,[...]. New Phytol 2015
Yujia Liu, Xiaoyu Ji, Xianguang Nie, Min Qu, Lei Zheng, Zilong Tan, Huimin Zhao, Lin Huo, Shengnan Liu, Bing Zhang,[...]. New Phytol 2015
5
The Intellectual Disability and Schizophrenia Associated Transcription Factor TCF4 Is Regulated by Neuronal Activity and Protein Kinase A.
Mari Sepp, Hanna Vihma, Kaja Nurm, Mari Urb, Stephanie Cerceo Page, Kaisa Roots, Anu Hark, Brady J Maher, Priit Pruunsild, Tõnis Timmusk. J Neurosci 2017
Mari Sepp, Hanna Vihma, Kaja Nurm, Mari Urb, Stephanie Cerceo Page, Kaisa Roots, Anu Hark, Brady J Maher, Priit Pruunsild, Tõnis Timmusk. J Neurosci 2017
17
Mutational, functional, and expression studies of the TCF4 gene in Pitt-Hopkins syndrome.
Loïc de Pontual, Yves Mathieu, Christelle Golzio, Marlène Rio, Valérie Malan, Nathalie Boddaert, Christine Soufflet, Capucine Picard, Anne Durandy, Angus Dobbie,[...]. Hum Mutat 2009
Loïc de Pontual, Yves Mathieu, Christelle Golzio, Marlène Rio, Valérie Malan, Nathalie Boddaert, Christine Soufflet, Capucine Picard, Anne Durandy, Angus Dobbie,[...]. Hum Mutat 2009
5
Haploinsufficiency of TCF4 causes syndromal mental retardation with intermittent hyperventilation (Pitt-Hopkins syndrome).
Christiane Zweier, Maarit M Peippo, Juliane Hoyer, Sergio Sousa, Armand Bottani, Jill Clayton-Smith, William Reardon, Jorge Saraiva, Alexandra Cabral, Ina Gohring,[...]. Am J Hum Genet 2007
Christiane Zweier, Maarit M Peippo, Juliane Hoyer, Sergio Sousa, Armand Bottani, Jill Clayton-Smith, William Reardon, Jorge Saraiva, Alexandra Cabral, Ina Gohring,[...]. Am J Hum Genet 2007
5
Common Pathophysiology in Multiple Mouse Models of Pitt-Hopkins Syndrome.
Courtney Thaxton, Alexander D Kloth, Ellen P Clark, Sheryl S Moy, Raymond A Chitwood, Benjamin D Philpot. J Neurosci 2018
Courtney Thaxton, Alexander D Kloth, Ellen P Clark, Sheryl S Moy, Raymond A Chitwood, Benjamin D Philpot. J Neurosci 2018
17
E-proteins orchestrate the progression of neural stem cell differentiation in the postnatal forebrain.
Bruno Fischer, Kasum Azim, Anahí Hurtado-Chong, Sandra Ramelli, María Fernández, Olivier Raineteau. Neural Dev 2014
Bruno Fischer, Kasum Azim, Anahí Hurtado-Chong, Sandra Ramelli, María Fernández, Olivier Raineteau. Neural Dev 2014
16
Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.