A citation-based method for searching scientific literature

F J Livesey, T Furukawa, M A Steffen, G M Church, C L Cepko. Curr Biol 2000
Times Cited: 218







List of co-cited articles
993 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity



Crx, a novel Otx-like paired-homeodomain protein, binds to and transactivates photoreceptor cell-specific genes.
S Chen, Q L Wang, Z Nie, H Sun, G Lennon, N G Copeland, D J Gilbert, N A Jenkins, D J Zack. Neuron 1997
549
51

Retinopathy and attenuated circadian entrainment in Crx-deficient mice.
T Furukawa, E M Morrow, T Li, F C Davis, C L Cepko. Nat Genet 1999
414
43


Nrl is required for rod photoreceptor development.
A J Mears, M Kondo, P K Swain, Y Takada, R A Bush, T L Saunders, P A Sieving, A Swaroop. Nat Genet 2001
673
33

Cone-rod dystrophy due to mutations in a novel photoreceptor-specific homeobox gene (CRX) essential for maintenance of the photoreceptor.
C L Freund, C Y Gregory-Evans, T Furukawa, M Papaioannou, J Looser, L Ploder, J Bellingham, D Ng, J A Herbrick, A Duncan,[...]. Cell 1997
438
31

Otx2 homeobox gene controls retinal photoreceptor cell fate and pineal gland development.
Akihiro Nishida, Akiko Furukawa, Chieko Koike, Yasuo Tano, Shinichi Aizawa, Isao Matsuo, Takahisa Furukawa. Nat Neurosci 2003
413
29

The cis-regulatory logic of the mammalian photoreceptor transcriptional network.
Timothy H-C Hsiau, Claudiu Diaconu, Connie A Myers, Jongwoo Lee, Constance L Cepko, Joseph C Corbo. PLoS One 2007
109
21




Mutation of a nuclear receptor gene, NR2E3, causes enhanced S cone syndrome, a disorder of retinal cell fate.
N B Haider, S G Jacobson, A V Cideciyan, R Swiderski, L M Streb, C Searby, G Beck, R Hockey, D B Hanna, S Gorman,[...]. Nat Genet 2000
351
17

Photoreceptor-specific nuclear receptor NR2E3 functions as a transcriptional activator in rod photoreceptors.
Hong Cheng, Hemant Khanna, Edwin C T Oh, David Hicks, Kenneth P Mitton, Anand Swaroop. Hum Mol Genet 2004
183
17

Expression profiling of the developing and mature Nrl-/- mouse retina: identification of retinal disease candidates and transcriptional regulatory targets of Nrl.
Shigeo Yoshida, Alan J Mears, James S Friedman, Todd Carter, Shirley He, Edwin Oh, Yuezhou Jing, Rafal Farjo, Gilles Fleury, Carrolee Barlow,[...]. Hum Mol Genet 2004
131
17

CRX ChIP-seq reveals the cis-regulatory architecture of mouse photoreceptors.
Joseph C Corbo, Karen A Lawrence, Marcus Karlstetter, Connie A Myers, Musa Abdelaziz, William Dirkes, Karin Weigelt, Martin Seifert, Vladimir Benes, Lars G Fritsche,[...]. Genome Res 2010
135
17

A range of clinical phenotypes associated with mutations in CRX, a photoreceptor transcription-factor gene.
M M Sohocki, L S Sullivan, H A Mintz-Hittner, D Birch, J R Heckenlively, C L Freund, R R McInnes, S P Daiger. Am J Hum Genet 1998
206
15

Genomic analysis of mouse retinal development.
Seth Blackshaw, Sanjiv Harpavat, Jeff Trimarchi, Li Cai, Haiyan Huang, Winston P Kuo, Griffin Weber, Kyungjoon Lee, Rebecca E Fraioli, Seo-Hee Cho,[...]. PLoS Biol 2004
447
15


De novo mutations in the CRX homeobox gene associated with Leber congenital amaurosis.
C L Freund, Q L Wang, S Chen, B L Muskat, C D Wiles, V C Sheffield, S G Jacobson, R R McInnes, D J Zack, E M Stone. Nat Genet 1998
234
14

A thyroid hormone receptor that is required for the development of green cone photoreceptors.
L Ng, J B Hurley, B Dierks, M Srinivas, C Saltó, B Vennström, T A Reh, D Forrest. Nat Genet 2001
390
14

Functional roles of Otx2 transcription factor in postnatal mouse retinal development.
Chieko Koike, Akihiro Nishida, Shinji Ueno, Hiromitsu Saito, Rikako Sanuki, Shigeru Sato, Akiko Furukawa, Shinichi Aizawa, Isao Matsuo, Noboru Suzuki,[...]. Mol Cell Biol 2007
133
14

Mutations in the cone-rod homeobox gene are associated with the cone-rod dystrophy photoreceptor degeneration.
P K Swain, S Chen, Q L Wang, L M Affatigato, C L Coats, K D Brady, G A Fishman, S G Jacobson, A Swaroop, E Stone,[...]. Neuron 1997
217
13


Global gene expression analysis of the developing postnatal mouse retina.
Michael I Dorrell, Edith Aguilar, Christoph Weber, Martin Friedlander. Invest Ophthalmol Vis Sci 2004
71
18


A typology of photoreceptor gene expression patterns in the mouse.
Joseph C Corbo, Connie A Myers, Karen A Lawrence, Ashutosh P Jadhav, Constance L Cepko. Proc Natl Acad Sci U S A 2007
77
15

Transcriptional regulation of photoreceptor development and homeostasis in the mammalian retina.
Anand Swaroop, Douglas Kim, Douglas Forrest. Nat Rev Neurosci 2010
341
12

Functional analysis of the rod photoreceptor cGMP phosphodiesterase alpha-subunit gene promoter: Nrl and Crx are required for full transcriptional activity.
Steven J Pittler, Youwen Zhang, Shiming Chen, Alan J Mears, Donald J Zack, Zhiyong Ren, Prabodh K Swain, Suxia Yao, Anand Swaroop, J Brandon White. J Biol Chem 2004
49
22

Cell fate determination in the vertebrate retina.
C L Cepko, C P Austin, X Yang, M Alexiades, D Ezzeddine. Proc Natl Acad Sci U S A 1996
767
11

Retinoid X receptor (gamma) is necessary to establish the S-opsin gradient in cone photoreceptors of the developing mouse retina.
Melanie R Roberts, Anita Hendrickson, Christopher R McGuire, Thomas A Reh. Invest Ophthalmol Vis Sci 2005
150
11

Synaptogenesis and outer segment formation are perturbed in the neural retina of Crx mutant mice.
Eric M Morrow, Takahisa Furukawa, Elio Raviola, Constance L Cepko. BMC Neurosci 2005
58
18

The basic motif-leucine zipper transcription factor Nrl can positively regulate rhodopsin gene expression.
A Rehemtulla, R Warwar, R Kumar, X Ji, D J Zack, A Swaroop. Proc Natl Acad Sci U S A 1996
178
10


A mutation in NRL is associated with autosomal dominant retinitis pigmentosa.
D A Bessant, A M Payne, K P Mitton, Q L Wang, P K Swain, C Plant, A C Bird, D J Zack, A Swaroop, S S Bhattacharya. Nat Genet 1999
163
10

Zebrafish cone-rod (crx) homeobox gene promotes retinogenesis.
Yu-chi Shen, Pamela A Raymond. Dev Biol 2004
87
11


Cone-like morphological, molecular, and electrophysiological features of the photoreceptors of the Nrl knockout mouse.
Lauren L Daniele, Concepcion Lillo, Arkady L Lyubarsky, Sergei S Nikonov, Nancy Philp, Alan J Mears, Anand Swaroop, David S Williams, Edward N Pugh. Invest Ophthalmol Vis Sci 2005
162
10

Transformation of cone precursors to functional rod photoreceptors by bZIP transcription factor NRL.
Edwin C T Oh, Naheed Khan, Elena Novelli, Hemant Khanna, Enrica Strettoi, Anand Swaroop. Proc Natl Acad Sci U S A 2007
113
10

A conserved retina-specific gene encodes a basic motif/leucine zipper domain.
A Swaroop, J Z Xu, H Pawar, A Jackson, C Skolnick, N Agarwal. Proc Natl Acad Sci U S A 1992
271
9


Transcriptional regulation of rod photoreceptor homeostasis revealed by in vivo NRL targetome analysis.
Hong Hao, Douglas S Kim, Bernward Klocke, Kory R Johnson, Kairong Cui, Norimoto Gotoh, Chongzhi Zang, Janina Gregorski, Linn Gieser, Weiqun Peng,[...]. PLoS Genet 2012
75
12


Both PCE-1/RX and OTX/CRX interactions are necessary for photoreceptor-specific gene expression.
A Kimura, D Singh, E F Wawrousek, M Kikuchi, M Nakamura, T Shinohara. J Biol Chem 2000
114
8

XOtx5b and XOtx2 regulate photoreceptor and bipolar fates in the Xenopus retina.
Andrea S Viczian, Robert Vignali, Michael E Zuber, Giuseppina Barsacchi, William A Harris. Development 2003
92
8

A deletion in a photoreceptor-specific nuclear receptor mRNA causes retinal degeneration in the rd7 mouse.
N B Akhmedov, N I Piriev, B Chang, A L Rapoport, N L Hawes, P M Nishina, S Nusinowitz, J R Heckenlively, T H Roderick, C A Kozak,[...]. Proc Natl Acad Sci U S A 2000
170
8


Gene expression in the developing mouse retina by EST sequencing and microarray analysis.
X Mu, S Zhao, R Pershad, T F Hsieh, A Scarpa, S W Wang, R A White, P D Beremand, T L Thomas, L Gan,[...]. Nucleic Acids Res 2001
65
12

The murine cone photoreceptor: a single cone type expresses both S and M opsins with retinal spatial patterning.
M L Applebury, M P Antoch, L C Baxter, L L Chun, J D Falk, F Farhangfar, K Kage, M G Krzystolik, L A Lyass, J T Robbins. Neuron 2000
403
8

Generating neuronal diversity in the retina: one for nearly all.
Till Marquardt, Peter Gruss. Trends Neurosci 2002
277
8

Retinal cell fate determination and bHLH factors.
Jun Hatakeyama, Ryoichiro Kageyama. Semin Cell Dev Biol 2004
193
8


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.