A citation-based method for searching scientific literature

C Aubert, M H Vos, P Mathis, A P Eker, K Brettel. Nature 2000
Times Cited: 319







List of co-cited articles
966 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


The cryptochromes: blue light photoreceptors in plants and animals.
Inês Chaves, Richard Pokorny, Martin Byrdin, Nathalie Hoang, Thorsten Ritz, Klaus Brettel, Lars-Oliver Essen, Gijsbertus T J van der Horst, Alfred Batschauer, Margaret Ahmad. Annu Rev Plant Biol 2011
496
39


Determining complete electron flow in the cofactor photoreduction of oxidized photolyase.
Zheyun Liu, Chuang Tan, Xunmin Guo, Jiang Li, Lijuan Wang, Aziz Sancar, Dongping Zhong. Proc Natl Acad Sci U S A 2013
72
41

Discovery and functional analysis of a 4th electron-transferring tryptophan conserved exclusively in animal cryptochromes and (6-4) photolyases.
Pavel Müller, Junpei Yamamoto, Ryan Martin, Shigenori Iwai, Klaus Brettel. Chem Commun (Camb) 2015
74
39

Crystal structure of DNA photolyase from Escherichia coli.
H W Park, S T Kim, A Sancar, J Deisenhofer. Science 1995
396
20


Electron hopping through the 15 A triple tryptophan molecular wire in DNA photolyase occurs within 30 ps.
Andras Lukacs, André P M Eker, Martin Byrdin, Klaus Brettel, Marten H Vos. J Am Chem Soc 2008
86
20

Light-induced electron transfer in a cryptochrome blue-light photoreceptor.
Baldissera Giovani, Martin Byrdin, Margaret Ahmad, Klaus Brettel. Nat Struct Biol 2003
194
18

Crystal structure and mechanism of a DNA (6-4) photolyase.
Melanie J Maul, Thomas R M Barends, Andreas F Glas, Max J Cryle, Tatiana Domratcheva, Sabine Schneider, Ilme Schlichting, Thomas Carell. Angew Chem Int Ed Engl 2008
139
17

Spectro-temporal characterization of the photoactivation mechanism of two new oxidized cryptochrome/photolyase photoreceptors.
Johanna Brazard, Anwar Usman, Fabien Lacombat, Christian Ley, Monique M Martin, Pascal Plaza, Laetitia Mony, Marc Heijde, Gérald Zabulon, Chris Bowler. J Am Chem Soc 2010
53
32

ATP binding turns plant cryptochrome into an efficient natural photoswitch.
Pavel Müller, Jean-Pierre Bouly, Kenichi Hitomi, Véronique Balland, Elizabeth D Getzoff, Thorsten Ritz, Klaus Brettel. Sci Rep 2014
72
23


Ultrafast dynamics and anionic active states of the flavin cofactor in cryptochrome and photolyase.
Ya-Ting Kao, Chuang Tan, Sang-Hun Song, Nuri Oztürk, Jiang Li, Lijuan Wang, Aziz Sancar, Dongping Zhong. J Am Chem Soc 2008
101
16

Crystal structures of an archaeal class II DNA photolyase and its complex with UV-damaged duplex DNA.
Stephan Kiontke, Yann Geisselbrecht, Richard Pokorny, Thomas Carell, Alfred Batschauer, Lars-Oliver Essen. EMBO J 2011
67
22

Crystal structure of a photolyase bound to a CPD-like DNA lesion after in situ repair.
Alexandra Mees, Tobias Klar, Petra Gnau, Ulrich Hennecke, Andre P M Eker, Thomas Carell, Lars-Oliver Essen. Science 2004
268
15


Quantum yield measurements of short-lived photoactivation intermediates in DNA photolyase: toward a detailed understanding of the triple tryptophan electron transfer chain.
Martin Byrdin, Andras Lukacs, Viruthachalam Thiagarajan, André P M Eker, Klaus Brettel, Marten H Vos. J Phys Chem A 2010
49
30

Reaction mechanisms of DNA photolyase.
Klaus Brettel, Martin Byrdin. Curr Opin Struct Biol 2010
112
14

Searching for a photocycle of the cryptochrome photoreceptors.
Bin Liu, Hongtao Liu, Dongping Zhong, Chentao Lin. Curr Opin Plant Biol 2010
113
14

A model for photoreceptor-based magnetoreception in birds.
T Ritz, S Adem, K Schulten. Biophys J 2000
582
14

A novel photoreaction mechanism for the circadian blue light photoreceptor Drosophila cryptochrome.
Alex Berndt, Tilman Kottke, Helena Breitkreuz, Radovan Dvorsky, Sven Hennig, Michael Alexander, Eva Wolf. J Biol Chem 2007
146
14

Intraprotein electron transfer and proton dynamics during photoactivation of DNA photolyase from E. coli: review and new insights from an "inverse" deuterium isotope effect.
Martin Byrdin, Valérie Sartor, André P M Eker, Marten H Vos, Corinne Aubert, Klaus Brettel, Paul Mathis. Biochim Biophys Acta 2004
68
19


CryB from Rhodobacter sphaeroides: a unique class of cryptochromes with new cofactors.
Yann Geisselbrecht, Sebastian Frühwirth, Claudia Schroeder, Antonio J Pierik, Gabriele Klug, Lars-Oliver Essen. EMBO Rep 2012
66
19

Dynamics and mechanism of repair of ultraviolet-induced (6-4) photoproduct by photolyase.
Jiang Li, Zheyun Liu, Chuang Tan, Xunmin Guo, Lijuan Wang, Aziz Sancar, Dongping Zhong. Nature 2010
138
13

Ultrafast dynamics of flavins in five redox states.
Ya-Ting Kao, Chaitanya Saxena, Ting-Fang He, Lijun Guo, Lijuan Wang, Aziz Sancar, Dongping Zhong. J Am Chem Soc 2008
151
13

Extended Electron-Transfer in Animal Cryptochromes Mediated by a Tetrad of Aromatic Amino Acids.
Daniel Nohr, Sophie Franz, Ryan Rodriguez, Bernd Paulus, Lars-Oliver Essen, Stefan Weber, Erik Schleicher. Biophys J 2016
57
22

Sub-nanosecond tryptophan radical deprotonation mediated by a protein-bound water cluster in class II DNA photolyases.
Pavel Müller, Elisabeth Ignatz, Stephan Kiontke, Klaus Brettel, Lars-Oliver Essen. Chem Sci 2017
22
59

Cryptochrome blue light photoreceptors are activated through interconversion of flavin redox states.
Jean-Pierre Bouly, Erik Schleicher, Maribel Dionisio-Sese, Filip Vandenbussche, Dominique Van Der Straeten, Nadia Bakrim, Stefan Meier, Alfred Batschauer, Paul Galland, Robert Bittl,[...]. J Biol Chem 2007
252
12


Structure of the photolyase-like domain of cryptochrome 1 from Arabidopsis thaliana.
Chad A Brautigam, Barbara S Smith, Zhiquan Ma, Maya Palnitkar, Diana R Tomchick, Mischa Machius, Johann Deisenhofer. Proc Natl Acad Sci U S A 2004
218
12

Repair of the (6-4) photoproduct by DNA photolyase requires two photons.
Junpei Yamamoto, Ryan Martin, Shigenori Iwai, Pascal Plaza, Klaus Brettel. Angew Chem Int Ed Engl 2013
40
30

Microsecond light-induced proton transfer to flavin in the blue light sensor plant cryptochrome.
Thomas Langenbacher, Dominik Immeln, Bernhard Dick, Tilman Kottke. J Am Chem Soc 2009
72
16


Recognition and repair of UV lesions in loop structures of duplex DNA by DASH-type cryptochrome.
Richard Pokorny, Tobias Klar, Ulrich Hennecke, Thomas Carell, Alfred Batschauer, Lars-Oliver Essen. Proc Natl Acad Sci U S A 2008
127
11

The signaling state of Arabidopsis cryptochrome 2 contains flavin semiquinone.
Roopa Banerjee, Erik Schleicher, Stefan Meier, Rafael Muñoz Viana, Richard Pokorny, Margaret Ahmad, Robert Bittl, Alfred Batschauer. J Biol Chem 2007
167
11

Variable electron transfer pathways in an amphibian cryptochrome: tryptophan versus tyrosine-based radical pairs.
Till Biskup, Bernd Paulus, Asako Okafuji, Kenichi Hitomi, Elizabeth D Getzoff, Stefan Weber, Erik Schleicher. J Biol Chem 2013
43
25



Magnetically sensitive light-induced reactions in cryptochrome are consistent with its proposed role as a magnetoreceptor.
Kiminori Maeda, Alexander J Robinson, Kevin B Henbest, Hannah J Hogben, Till Biskup, Margaret Ahmad, Erik Schleicher, Stefan Weber, Christiane R Timmel, P J Hore. Proc Natl Acad Sci U S A 2012
189
11

Kinetics of cyclobutane thymine dimer splitting by DNA photolyase directly monitored in the UV.
Viruthachalam Thiagarajan, Martin Byrdin, André P M Eker, Pavel Müller, Klaus Brettel. Proc Natl Acad Sci U S A 2011
53
20

Structure of full-length Drosophila cryptochrome.
Brian D Zoltowski, Anand T Vaidya, Deniz Top, Joanne Widom, Michael W Young, Brian R Crane. Nature 2011
112
11

Electron transfer mechanisms of DNA repair by photolyase.
Dongping Zhong. Annu Rev Phys Chem 2015
58
18

Structural biology of DNA photolyases and cryptochromes.
Markus Müller, Thomas Carell. Curr Opin Struct Biol 2009
88
11

What makes the difference between a cryptochrome and DNA photolyase? A spectroelectrochemical comparison of the flavin redox transitions.
Véronique Balland, Martin Byrdin, Andre P M Eker, Margaret Ahmad, Klaus Brettel. J Am Chem Soc 2009
63
15



Tryptophan-accelerated electron flow through proteins.
Crystal Shih, Anna Katrine Museth, Malin Abrahamsson, Ana Maria Blanco-Rodriguez, Angel J Di Bilio, Jawahar Sudhamsu, Brian R Crane, Kate L Ronayne, Mike Towrie, Antonín Vlcek,[...]. Science 2008
283
10

Crystal structure of the T(6-4)C lesion in complex with a (6-4) DNA photolyase and repair of UV-induced (6-4) and Dewar photolesions.
Andreas F Glas, Sabine Schneider, Melanie J Maul, Ulrich Hennecke, Thomas Carell. Chemistry 2009
58
17

Functional motifs in the (6-4) photolyase crystal structure make a comparative framework for DNA repair photolyases and clock cryptochromes.
Kenichi Hitomi, Luciano DiTacchio, Andrew S Arvai, Junpei Yamamoto, Sang-Tae Kim, Takeshi Todo, John A Tainer, Shigenori Iwai, Satchidananda Panda, Elizabeth D Getzoff. Proc Natl Acad Sci U S A 2009
92
10


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.