A citation-based method for searching scientific literature

B T Wimberly, D E Brodersen, W M Clemons, R J Morgan-Warren, A P Carter, C Vonrhein, T Hartsch, V Ramakrishnan. Nature 2000
Times Cited: 1462







List of co-cited articles
937 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


The complete atomic structure of the large ribosomal subunit at 2.4 A resolution.
N Ban, P Nissen, J Hansen, P B Moore, T A Steitz. Science 2000
45

Structure of functionally activated small ribosomal subunit at 3.3 angstroms resolution.
F Schluenzen, A Tocilj, R Zarivach, J Harms, M Gluehmann, D Janell, A Bashan, H Bartels, I Agmon, F Franceschi,[...]. Cell 2000
681
24

Structure of the 70S ribosome complexed with mRNA and tRNA.
Maria Selmer, Christine M Dunham, Frank V Murphy, Albert Weixlbaumer, Sabine Petry, Ann C Kelley, John R Weir, V Ramakrishnan. Science 2006
929
18

Structures of the bacterial ribosome at 3.5 A resolution.
Barbara S Schuwirth, Maria A Borovinskaya, Cathy W Hau, Wen Zhang, Antón Vila-Sanjurjo, James M Holton, Jamie H Doudna Cate. Science 2005
963
16

Crystal structure of the ribosome at 5.5 A resolution.
M M Yusupov, G Z Yusupova, A Baucom, K Lieberman, T N Earnest, J H Cate, H F Noller. Science 2001
13

The structure of the eukaryotic ribosome at 3.0 Å resolution.
Adam Ben-Shem, Nicolas Garreau de Loubresse, Sergey Melnikov, Lasse Jenner, Gulnara Yusupova, Marat Yusupov. Science 2011
705
13

Recognition of cognate transfer RNA by the 30S ribosomal subunit.
J M Ogle, D E Brodersen, W M Clemons , M J Tarry, A P Carter, V Ramakrishnan. Science 2001
833
13

The structural basis of ribosome activity in peptide bond synthesis.
P Nissen, J Hansen, N Ban, P B Moore, T A Steitz. Science 2000
13

A new system for naming ribosomal proteins.
Nenad Ban, Roland Beckmann, Jamie H D Cate, Jonathan D Dinman, François Dragon, Steven R Ellis, Denis L J Lafontaine, Lasse Lindahl, Anders Liljas, Jeffrey M Lipton,[...]. Curr Opin Struct Biol 2014
310
12

Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics.
A P Carter, W M Clemons, D E Brodersen, R J Morgan-Warren, B T Wimberly, V Ramakrishnan. Nature 2000
12

UCSF Chimera--a visualization system for exploratory research and analysis.
Eric F Pettersen, Thomas D Goddard, Conrad C Huang, Gregory S Couch, Daniel M Greenblatt, Elaine C Meng, Thomas E Ferrin. J Comput Chem 2004
11

High-resolution structure of the Escherichia coli ribosome.
Jonas Noeske, Michael R Wasserman, Daniel S Terry, Roger B Altman, Scott C Blanchard, Jamie H D Cate. Nat Struct Mol Biol 2015
130
10


PHENIX: a comprehensive Python-based system for macromolecular structure solution.
Paul D Adams, Pavel V Afonine, Gábor Bunkóczi, Vincent B Chen, Ian W Davis, Nathaniel Echols, Jeffrey J Headd, Li-Wei Hung, Gary J Kapral, Ralf W Grosse-Kunstleve,[...]. Acta Crystallogr D Biol Crystallogr 2010
10

High resolution structure of the large ribosomal subunit from a mesophilic eubacterium.
J Harms, F Schluenzen, R Zarivach, A Bashan, S Gat, I Agmon, H Bartels, F Franceschi, A Yonath. Cell 2001
675
9

The Protein Data Bank.
H M Berman, J Westbrook, Z Feng, G Gilliland, T N Bhat, H Weissig, I N Shindyalov, P E Bourne. Nucleic Acids Res 2000
9

Selection of tRNA by the ribosome requires a transition from an open to a closed form.
James M Ogle, Frank V Murphy, Michael J Tarry, V Ramakrishnan. Cell 2002
459
9

Crystal structure of the eukaryotic 60S ribosomal subunit in complex with initiation factor 6.
Sebastian Klinge, Felix Voigts-Hoffmann, Marc Leibundgut, Sofia Arpagaus, Nenad Ban. Science 2011
239
8

Peeling the onion: ribosomes are ancient molecular fossils.
Chiaolong Hsiao, Srividya Mohan, Benson K Kalahar, Loren Dean Williams. Mol Biol Evol 2009
76
10


Assembly of bacterial ribosomes.
Zahra Shajani, Michael T Sykes, James R Williamson. Annu Rev Biochem 2011
282
8

Ribosome. The structure of the human mitochondrial ribosome.
Alexey Amunts, Alan Brown, Jaan Toots, Sjors H W Scheres, V Ramakrishnan. Science 2015
266
7

High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome.
Yaser Hashem, Amedee des Georges, Jie Fu, Sarah N Buss, Fabrice Jossinet, Amy Jobe, Qin Zhang, Hstau Y Liao, Robert A Grassucci, Chandrajit Bajaj,[...]. Nature 2013
85
8

One core, two shells: bacterial and eukaryotic ribosomes.
Sergey Melnikov, Adam Ben-Shem, Nicolas Garreau de Loubresse, Lasse Jenner, Gulnara Yusupova, Marat Yusupov. Nat Struct Mol Biol 2012
220
7

Features and development of Coot.
P Emsley, B Lohkamp, W G Scott, K Cowtan. Acta Crystallogr D Biol Crystallogr 2010
7

A new understanding of the decoding principle on the ribosome.
Natalia Demeshkina, Lasse Jenner, Eric Westhof, Marat Yusupov, Gulnara Yusupova. Nature 2012
206
7

Ensemble cryo-EM elucidates the mechanism of translation fidelity.
Anna B Loveland, Gabriel Demo, Nikolaus Grigorieff, Andrei A Korostelev. Nature 2017
82
8

Structure of the human 80S ribosome.
Heena Khatter, Alexander G Myasnikov, S Kundhavai Natchiar, Bruno P Klaholz. Nature 2015
226
7

Structure of the E. coli ribosome-EF-Tu complex at <3 Å resolution by Cs-corrected cryo-EM.
Niels Fischer, Piotr Neumann, Andrey L Konevega, Lars V Bock, Ralf Ficner, Marina V Rodnina, Holger Stark. Nature 2015
239
7

Structure of the yeast mitochondrial large ribosomal subunit.
Alexey Amunts, Alan Brown, Xiao-Chen Bai, Jose L Llácer, Tanweer Hussain, Paul Emsley, Fei Long, Garib Murshudov, Sjors H W Scheres, V Ramakrishnan. Science 2014
369
7

Coot: model-building tools for molecular graphics.
Paul Emsley, Kevin Cowtan. Acta Crystallogr D Biol Crystallogr 2004
7

History of the ribosome and the origin of translation.
Anton S Petrov, Burak Gulen, Ashlyn M Norris, Nicholas A Kovacs, Chad R Bernier, Kathryn A Lanier, George E Fox, Stephen C Harvey, Roger M Wartell, Nicholas V Hud,[...]. Proc Natl Acad Sci U S A 2015
104
7

Structures of the bacterial ribosome in classical and hybrid states of tRNA binding.
Jack A Dunkle, Leyi Wang, Michael B Feldman, Arto Pulk, Vincent B Chen, Gary J Kapral, Jonas Noeske, Jane S Richardson, Scott C Blanchard, Jamie H Doudna Cate. Science 2011
251
7


Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection.
Tomoya Baba, Takeshi Ara, Miki Hasegawa, Yuki Takai, Yoshiko Okumura, Miki Baba, Kirill A Datsenko, Masaru Tomita, Barry L Wanner, Hirotada Mori. Mol Syst Biol 2006
7

Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1.
Julius Rabl, Marc Leibundgut, Sandro F Ataide, Andrea Haag, Nenad Ban. Science 2011
330
6

Structural insights into the role of rRNA modifications in protein synthesis and ribosome assembly.
Yury S Polikanov, Sergey V Melnikov, Dieter Söll, Thomas A Steitz. Nat Struct Mol Biol 2015
114
6

The path of messenger RNA through the ribosome.
G Z Yusupova, M M Yusupov, J H Cate, H F Noller. Cell 2001
427
6

The structure of the yeast mitochondrial ribosome.
Nirupa Desai, Alan Brown, Alexey Amunts, V Ramakrishnan. Science 2017
88
6

Ribosome. The complete structure of the 55S mammalian mitochondrial ribosome.
Basil J Greber, Philipp Bieri, Marc Leibundgut, Alexander Leitner, Ruedi Aebersold, Daniel Boehringer, Nenad Ban. Science 2015
236
6

Promiscuous behaviour of archaeal ribosomal proteins: implications for eukaryotic ribosome evolution.
Jean-Paul Armache, Andreas M Anger, Viter Márquez, Sibylle Franckenberg, Thomas Fröhlich, Elizabeth Villa, Otto Berninghausen, Michael Thomm, Georg J Arnold, Roland Beckmann,[...]. Nucleic Acids Res 2013
43
13

Large-Scale Movements of IF3 and tRNA during Bacterial Translation Initiation.
Tanweer Hussain, Jose L Llácer, Brian T Wimberly, Jeffrey S Kieft, V Ramakrishnan. Cell 2016
64
9

Structural basis for the inhibition of the eukaryotic ribosome.
Nicolas Garreau de Loubresse, Irina Prokhorova, Wolf Holtkamp, Marina V Rodnina, Gulnara Yusupova, Marat Yusupov. Nature 2014
235
6

Crystal structure of the eukaryotic ribosome.
Adam Ben-Shem, Lasse Jenner, Gulnara Yusupova, Marat Yusupov. Science 2010
284
6

RNA tertiary interactions in the large ribosomal subunit: the A-minor motif.
P Nissen, J A Ippolito, N Ban, P B Moore, T A Steitz. Proc Natl Acad Sci U S A 2001
489
6

A 9 A resolution X-ray crystallographic map of the large ribosomal subunit.
N Ban, B Freeborn, P Nissen, P Penczek, R A Grassucci, R Sweet, J Frank, P B Moore, T A Steitz. Cell 1998
181
6

Head swivel on the ribosome facilitates translocation by means of intra-subunit tRNA hybrid sites.
Andreas H Ratje, Justus Loerke, Aleksandra Mikolajka, Matthias Brünner, Peter W Hildebrand, Agata L Starosta, Alexandra Dönhöfer, Sean R Connell, Paola Fucini, Thorsten Mielke,[...]. Nature 2010
244
6

Molecular signatures of ribosomal evolution.
Elijah Roberts, Anurag Sethi, Jonathan Montoya, Carl R Woese, Zaida Luthey-Schulten. Proc Natl Acad Sci U S A 2008
72
8

Novel base-pairing interactions at the tRNA wobble position crucial for accurate reading of the genetic code.
Alexey Rozov, Natalia Demeshkina, Iskander Khusainov, Eric Westhof, Marat Yusupov, Gulnara Yusupova. Nat Commun 2016
83
7

Ribosome biogenesis and the translation process in Escherichia coli.
Magdalena Kaczanowska, Monica Rydén-Aulin. Microbiol Mol Biol Rev 2007
243
6


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.