A citation-based method for searching scientific literature

K Hitomi, H Nakamura, S T Kim, T Mizukoshi, T Ishikawa, S Iwai, T Todo. J Biol Chem 2001
Times Cited: 96







List of co-cited articles
771 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity



Reaction mechanism of (6-4) photolyase.
X Zhao, J Liu, D S Hsu, S Zhao, J S Taylor, A Sancar. J Biol Chem 1997
119
57

Crystal structure and mechanism of a DNA (6-4) photolyase.
Melanie J Maul, Thomas R M Barends, Andreas F Glas, Max J Cryle, Tatiana Domratcheva, Sabine Schneider, Ilme Schlichting, Thomas Carell. Angew Chem Int Ed Engl 2008
139
50

A new photoreactivating enzyme that specifically repairs ultraviolet light-induced (6-4)photoproducts.
T Todo, H Takemori, H Ryo, M Ihara, T Matsunaga, O Nikaido, K Sato, T Nomura. Nature 1993
224
48

Crystal structure of a photolyase bound to a CPD-like DNA lesion after in situ repair.
Alexandra Mees, Tobias Klar, Petra Gnau, Ulrich Hennecke, Andre P M Eker, Thomas Carell, Lars-Oliver Essen. Science 2004
268
45

Crystal structure of DNA photolyase from Escherichia coli.
H W Park, S T Kim, A Sancar, J Deisenhofer. Science 1995
396
44

Characterization of (6-4) photoproduct DNA photolyase.
S T Kim, K Malhotra, C A Smith, J S Taylor, A Sancar. J Biol Chem 1994
104
41

Binding and catalytic properties of Xenopus (6-4) photolyase.
K Hitomi, S T Kim, S Iwai, N Harima, E Otoshi, M Ikenaga, T Todo. J Biol Chem 1997
89
44

Electron nuclear double resonance differentiates complementary roles for active site histidines in (6-4) photolyase.
Erik Schleicher, Kenichi Hitomi, Christopher W M Kay, Elizabeth D Getzoff, Takeshi Todo, Stefan Weber. J Biol Chem 2007
68
55

Dynamics and mechanism of repair of ultraviolet-induced (6-4) photoproduct by photolyase.
Jiang Li, Zheyun Liu, Chuang Tan, Xunmin Guo, Lijuan Wang, Aziz Sancar, Dongping Zhong. Nature 2010
138
35


Theoretical study on the repair mechanism of the (6-4) photolesion by the (6-4) photolyase.
Keyarash Sadeghian, Marco Bocola, Thomas Merz, Martin Schütz. J Am Chem Soc 2010
50
60

Crystal structure of DNA photolyase from Anacystis nidulans.
T Tamada, K Kitadokoro, Y Higuchi, K Inaka, A Yasui, P E de Ruiter, A P Eker, K Miki. Nat Struct Biol 1997
160
29


Direct observation of thymine dimer repair in DNA by photolyase.
Ya-Ting Kao, Chaitanya Saxena, Lijuan Wang, Aziz Sancar, Dongping Zhong. Proc Natl Acad Sci U S A 2005
174
27

Functional motifs in the (6-4) photolyase crystal structure make a comparative framework for DNA repair photolyases and clock cryptochromes.
Kenichi Hitomi, Luciano DiTacchio, Andrew S Arvai, Junpei Yamamoto, Sang-Tae Kim, Takeshi Todo, John A Tainer, Shigenori Iwai, Satchidananda Panda, Elizabeth D Getzoff. Proc Natl Acad Sci U S A 2009
92
27


Crystal structure of the T(6-4)C lesion in complex with a (6-4) DNA photolyase and repair of UV-induced (6-4) and Dewar photolesions.
Andreas F Glas, Sabine Schneider, Melanie J Maul, Ulrich Hennecke, Thomas Carell. Chemistry 2009
58
41


Intraprotein radical transfer during photoactivation of DNA photolyase.
C Aubert, M H Vos, P Mathis, A P Eker, K Brettel. Nature 2000
319
22

The cryptochromes: blue light photoreceptors in plants and animals.
Inês Chaves, Richard Pokorny, Martin Byrdin, Nathalie Hoang, Thorsten Ritz, Klaus Brettel, Lars-Oliver Essen, Gijsbertus T J van der Horst, Alfred Batschauer, Margaret Ahmad. Annu Rev Plant Biol 2011
496
22

Identification of a new cryptochrome class. Structure, function, and evolution.
Ronald Brudler, Kenichi Hitomi, Hiromi Daiyasu, Hiroyuki Toh, Ken-ichi Kucho, Masahiro Ishiura, Minoru Kanehisa, Victoria A Roberts, Takeshi Todo, John A Tainer,[...]. Mol Cell 2003
228
20

Repair of the (6-4) photoproduct by DNA photolyase requires two photons.
Junpei Yamamoto, Ryan Martin, Shigenori Iwai, Pascal Plaza, Klaus Brettel. Angew Chem Int Ed Engl 2013
40
50


Crystal structure of thermostable DNA photolyase: pyrimidine-dimer recognition mechanism.
H Komori, R Masui, S Kuramitsu, S Yokoyama, T Shibata, Y Inoue, K Miki. Proc Natl Acad Sci U S A 2001
89
20

A (6-4) photolyase model: repair of DNA (6-4) lesions requires a reduced and deprotonated flavin.
Michaela K Cichon, Simone Arnold, Thomas Carell. Angew Chem Int Ed Engl 2002
40
45

Electron-transfer induced repair of 6-4 photoproducts in DNA: a computational study.
O Anders Borg, Leif A Eriksson, Bo Durbeej. J Phys Chem A 2007
33
54

Dynamics and mechanism of cyclobutane pyrimidine dimer repair by DNA photolyase.
Zheyun Liu, Chuang Tan, Xunmin Guo, Ya-Ting Kao, Jiang Li, Lijuan Wang, Aziz Sancar, Dongping Zhong. Proc Natl Acad Sci U S A 2011
111
18


The mechanism of action of DNA photolyases.
T Carell, L T Burgdorf, L M Kundu, M Cichon. Curr Opin Chem Biol 2001
110
17

Flavin adenine dinucleotide as a chromophore of the Xenopus (6-4)photolyase.
T Todo, S T Kim, K Hitomi, E Otoshi, T Inui, H Morioka, H Kobayashi, E Ohtsuka, H Toh, M Ikenaga. Nucleic Acids Res 1997
71
23


Cis-syn thymidine dimer repair by DNA photolyase in real time.
Alexander W MacFarlane, Robert J Stanley. Biochemistry 2003
74
22



Evidence for dinucleotide flipping by DNA photolyase.
B J Vande Berg, G B Sancar. J Biol Chem 1998
67
23


Role of the carbonyl group of the (6-4) photoproduct in the (6-4) photolyase reaction.
Junpei Yamamoto, Kenichi Hitomi, Ryosuke Hayashi, Elizabeth D Getzoff, Shigenori Iwai. Biochemistry 2009
20
80

Cloning and characterization of a gene (UVR3) required for photorepair of 6-4 photoproducts in Arabidopsis thaliana.
S Nakajima, M Sugiyama, S Iwai, K Hitomi, E Otoshi, S T Kim, C Z Jiang, T Todo, A B Britt, K Yamamoto. Nucleic Acids Res 1998
113
15


Computational studies of DNA photolyase.
Christopher B Harrison, Lauren L O'Neil, Olaf Wiest. J Phys Chem A 2005
53
28

Light-driven DNA repair by photolyases.
L O Essen, T Klar. Cell Mol Life Sci 2006
111
15

A QM/MM investigation of thymine dimer radical anion splitting catalyzed by DNA photolyase.
Fanny Masson, Teodoro Laino, Ursula Rothlisberger, Jürg Hutter. Chemphyschem 2009
49
30



Evidence that the (6-4) photolyase mechanism can proceed through an oxetane intermediate.
Saâdia Asgatay, Christian Petermann, Dominique Harakat, Dominique Guillaume, John-Stephen Taylor, Pascale Clivio. J Am Chem Soc 2008
18
77


UV-induced DNA damage and repair: a review.
Rajeshwar P Sinha, Donat P Häder. Photochem Photobiol Sci 2002
894
13

Structure of the photolyase-like domain of cryptochrome 1 from Arabidopsis thaliana.
Chad A Brautigam, Barbara S Smith, Zhiquan Ma, Maya Palnitkar, Diana R Tomchick, Mischa Machius, Johann Deisenhofer. Proc Natl Acad Sci U S A 2004
218
13

Electron tunneling pathways and role of adenine in repair of cyclobutane pyrimidine dimer by DNA photolyase.
Zheyun Liu, Xunmin Guo, Chuang Tan, Jiang Li, Ya-Ting Kao, Lijuan Wang, Aziz Sancar, Dongping Zhong. J Am Chem Soc 2012
48
27


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.