A citation-based method for searching scientific literature

A J Bannister, P Zegerman, J F Partridge, E A Miska, J O Thomas, R C Allshire, T Kouzarides. Nature 2001
Times Cited: 1973







List of co-cited articles
1151 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Methylation of histone H3 lysine 9 creates a binding site for HP1 proteins.
M Lachner, D O'Carroll, S Rea, K Mechtler, T Jenuwein. Nature 2001
54

Liquid droplet formation by HP1α suggests a role for phase separation in heterochromatin.
Adam G Larson, Daniel Elnatan, Madeline M Keenen, Michael J Trnka, Jonathan B Johnston, Alma L Burlingame, David A Agard, Sy Redding, Geeta J Narlikar. Nature 2017
630
30

Role of histone H3 lysine 9 methylation in epigenetic control of heterochromatin assembly.
J Nakayama , J C Rice, B D Strahl, C D Allis, S I Grewal. Science 2001
29

Phase separation drives heterochromatin domain formation.
Amy R Strom, Alexander V Emelyanov, Mustafa Mir, Dmitry V Fyodorov, Xavier Darzacq, Gary H Karpen. Nature 2017
676
29


Regulation of chromatin structure by site-specific histone H3 methyltransferases.
S Rea, F Eisenhaber, D O'Carroll, B D Strahl, Z W Sun, M Schmid, S Opravil, K Mechtler, C P Ponting, C D Allis,[...]. Nature 2000
15

Structure of HP1 chromodomain bound to a lysine 9-methylated histone H3 tail.
Steven A Jacobs, Sepideh Khorasanizadeh. Science 2002
590
13

Translating the histone code.
T Jenuwein, C D Allis. Science 2001
12

Ten principles of heterochromatin formation and function.
Robin C Allshire, Hiten D Madhani. Nat Rev Mol Cell Biol 2018
176
11

Regulation of heterochromatic silencing and histone H3 lysine-9 methylation by RNAi.
Thomas A Volpe, Catherine Kidner, Ira M Hall, Grace Teng, Shiv I S Grewal, Robert A Martienssen. Science 2002
11

H3K9me3-Dependent Heterochromatin: Barrier to Cell Fate Changes.
Justin S Becker, Dario Nicetto, Kenneth S Zaret. Trends Genet 2016
187
11

Roles of the Clr4 methyltransferase complex in nucleation, spreading and maintenance of heterochromatin.
Ke Zhang, Kerstin Mosch, Wolfgang Fischle, Shiv I S Grewal. Nat Struct Mol Biol 2008
244
11

Partitioning and plasticity of repressive histone methylation states in mammalian chromatin.
Antoine H F M Peters, Stefan Kubicek, Karl Mechtler, Roderick J O'Sullivan, Alwin A H A Derijck, Laura Perez-Burgos, Alexander Kohlmaier, Susanne Opravil, Makoto Tachibana, Yoichi Shinkai,[...]. Mol Cell 2003
817
11

G9a histone methyltransferase plays a dominant role in euchromatic histone H3 lysine 9 methylation and is essential for early embryogenesis.
Makoto Tachibana, Kenji Sugimoto, Masami Nozaki, Jun Ueda, Tsutomu Ohta, Misao Ohki, Mikiko Fukuda, Naoki Takeda, Hiroyuki Niida, Hiroyuki Kato,[...]. Genes Dev 2002
851
11

HP1 reshapes nucleosome core to promote phase separation of heterochromatin.
S Sanulli, M J Trnka, V Dharmarajan, R W Tibble, B D Pascal, A L Burlingame, P R Griffin, J D Gross, G J Narlikar. Nature 2019
124
11

Epigenetics. Epigenetic inheritance uncoupled from sequence-specific recruitment.
Kaushik Ragunathan, Gloria Jih, Danesh Moazed. Science 2015
154
10

Epigenetics. Restricted epigenetic inheritance of H3K9 methylation.
Pauline N C B Audergon, Sandra Catania, Alexander Kagansky, Pin Tong, Manu Shukla, Alison L Pidoux, Robin C Allshire. Science 2015
136
10

Heterochromatin revisited.
Shiv I S Grewal, Songtao Jia. Nat Rev Genet 2007
860
10

High-resolution profiling of histone methylations in the human genome.
Artem Barski, Suresh Cuddapah, Kairong Cui, Tae-Young Roh, Dustin E Schones, Zhibin Wang, Gang Wei, Iouri Chepelev, Keji Zhao. Cell 2007
10

Heterochromatin formation in mammalian cells: interaction between histones and HP1 proteins.
A L Nielsen, M Oulad-Abdelghani, J A Ortiz, E Remboutsika, P Chambon, R Losson. Mol Cell 2001
305
10

Constitutive heterochromatin formation and transcription in mammals.
Nehmé Saksouk, Elisabeth Simboeck, Jérôme Déjardin. Epigenetics Chromatin 2015
229
9

Regulation of chromatin by histone modifications.
Andrew J Bannister, Tony Kouzarides. Cell Res 2011
9

Chromodomain-mediated oligomerization of HP1 suggests a nucleosome-bridging mechanism for heterochromatin assembly.
Daniele Canzio, Evelyn Y Chang, Smita Shankar, Kristopher M Kuchenbecker, Matthew D Simon, Hiten D Madhani, Geeta J Narlikar, Bassem Al-Sady. Mol Cell 2011
169
9

A silencing pathway to induce H3-K9 and H4-K20 trimethylation at constitutive heterochromatin.
Gunnar Schotta, Monika Lachner, Kavitha Sarma, Anja Ebert, Roopsha Sengupta, Gunter Reuter, Danny Reinberg, Thomas Jenuwein. Genes Dev 2004
749
9

Loss of the Suv39h histone methyltransferases impairs mammalian heterochromatin and genome stability.
A H Peters, D O'Carroll, H Scherthan, K Mechtler, S Sauer, C Schöfer, K Weipoltshammer, M Pagani, M Lachner, A Kohlmaier,[...]. Cell 2001
9

DNA methylation pathways and their crosstalk with histone methylation.
Jiamu Du, Lianna M Johnson, Steven E Jacobsen, Dinshaw J Patel. Nat Rev Mol Cell Biol 2015
399
8

The nucleation and maintenance of heterochromatin by a histone deacetylase in fission yeast.
Takatomi Yamada, Wolfgang Fischle, Tomoyasu Sugiyama, C David Allis, Shiv I S Grewal. Mol Cell 2005
209
8

Coordinated methyl and RNA binding is required for heterochromatin localization of mammalian HP1alpha.
Christian Muchardt, Marie Guilleme, Jacob-S Seeler, Didier Trouche, Anne Dejean, Moshe Yaniv. EMBO Rep 2002
248
8


Establishment and maintenance of a heterochromatin domain.
Ira M Hall, Gurumurthy D Shankaranarayana, Ken-Ichi Noma, Nabieh Ayoub, Amikam Cohen, Shiv I S Grewal. Science 2002
640
8

Proviral silencing in embryonic stem cells requires the histone methyltransferase ESET.
Toshiyuki Matsui, Danny Leung, Hiroki Miyashita, Irina A Maksakova, Hitoshi Miyachi, Hiroshi Kimura, Makoto Tachibana, Matthew C Lorincz, Yoichi Shinkai. Nature 2010
440
8


A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping.
Suhas S P Rao, Miriam H Huntley, Neva C Durand, Elena K Stamenova, Ivan D Bochkov, James T Robinson, Adrian L Sanborn, Ido Machol, Arina D Omer, Eric S Lander,[...]. Cell 2014
8

Regulation of HP1-chromatin binding by histone H3 methylation and phosphorylation.
Wolfgang Fischle, Boo Shan Tseng, Holger L Dormann, Beatrix M Ueberheide, Benjamin A Garcia, Jeffrey Shabanowitz, Donald F Hunt, Hironori Funabiki, C David Allis. Nature 2005
651
8


A conformational switch in HP1 releases auto-inhibition to drive heterochromatin assembly.
Daniele Canzio, Maofu Liao, Nariman Naber, Edward Pate, Adam Larson, Shenping Wu, Diana B Marina, Jennifer F Garcia, Hiten D Madhani, Roger Cooke,[...]. Nature 2013
88
9

Maintenance of stable heterochromatin domains by dynamic HP1 binding.
Thierry Cheutin, Adrian J McNairn, Thomas Jenuwein, David M Gilbert, Prim B Singh, Tom Misteli. Science 2003
448
8

H3K9me3-heterochromatin loss at protein-coding genes enables developmental lineage specification.
Dario Nicetto, Greg Donahue, Tanya Jain, Tao Peng, Simone Sidoli, Lihong Sheng, Thomas Montavon, Justin S Becker, Jessica M Grindheim, Kimberly Blahnik,[...]. Science 2019
48
16

Topological domains in mammalian genomes identified by analysis of chromatin interactions.
Jesse R Dixon, Siddarth Selvaraj, Feng Yue, Audrey Kim, Yan Li, Yin Shen, Ming Hu, Jun S Liu, Bing Ren. Nature 2012
8

HP1 proteins form distinct complexes and mediate heterochromatic gene silencing by nonoverlapping mechanisms.
Mohammad R Motamedi, Eun-Jin Erica Hong, Xue Li, Scott Gerber, Carilee Denison, Steven Gygi, Danesh Moazed. Mol Cell 2008
138
7

Heterochromatin: Guardian of the Genome.
Aniek Janssen, Serafin U Colmenares, Gary H Karpen. Annu Rev Cell Dev Biol 2018
118
7

Localization and phosphorylation of HP1 proteins during the cell cycle in mammalian cells.
E Minc, Y Allory, H J Worman, J C Courvalin, B Buendia. Chromosoma 1999
268
7


The Heterochromatin Protein 1 family.
Gwen Lomberk, Lori Wallrath, Raul Urrutia. Genome Biol 2006
168
7

Dynamic and flexible H3K9me3 bridging via HP1β dimerization establishes a plastic state of condensed chromatin.
Kyoko Hiragami-Hamada, Szabolcs Soeroes, Miroslav Nikolov, Bryan Wilkins, Sarah Kreuz, Carol Chen, Inti A De La Rosa-Velázquez, Hans Michael Zenn, Nils Kost, Wiebke Pohl,[...]. Nat Commun 2016
64
10

Model-based analysis of ChIP-Seq (MACS).
Yong Zhang, Tao Liu, Clifford A Meyer, Jérôme Eeckhoute, David S Johnson, Bradley E Bernstein, Chad Nusbaum, Richard M Myers, Myles Brown, Wei Li,[...]. Genome Biol 2008
7

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2.
Michael I Love, Wolfgang Huber, Simon Anders. Genome Biol 2014
7

Structure of the HP1 chromodomain bound to histone H3 methylated at lysine 9.
Peter R Nielsen, Daniel Nietlispach, Helen R Mott, Juliana Callaghan, Andrew Bannister, Tony Kouzarides, Alexey G Murzin, Natalia V Murzina, Ernest D Laue. Nature 2002
446
7

The molecular hallmarks of epigenetic control.
C David Allis, Thomas Jenuwein. Nat Rev Genet 2016
893
7

Structural Basis of Heterochromatin Formation by Human HP1.
Shinichi Machida, Yoshimasa Takizawa, Masakazu Ishimaru, Yukihiko Sugita, Satoshi Sekine, Jun-Ichi Nakayama, Matthias Wolf, Hitoshi Kurumizaka. Mol Cell 2018
90
7


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.