A citation-based method for searching scientific literature

S L Butler, M S Hansen, F D Bushman. Nat Med 2001
Times Cited: 550







List of co-cited articles
975 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


HIV-1 capsid-cyclophilin interactions determine nuclear import pathway, integration targeting and replication efficiency.
Torsten Schaller, Karen E Ocwieja, Jane Rasaiyaah, Amanda J Price, Troy L Brady, Shoshannah L Roth, Stéphane Hué, Adam J Fletcher, KyeongEun Lee, Vineet N KewalRamani,[...]. PLoS Pathog 2011
309
15

SAMHD1 is the dendritic- and myeloid-cell-specific HIV-1 restriction factor counteracted by Vpx.
Nadine Laguette, Bijan Sobhian, Nicoletta Casartelli, Mathieu Ringeard, Christine Chable-Bessia, Emmanuel Ségéral, Ahmad Yatim, Stéphane Emiliani, Olivier Schwartz, Monsef Benkirane. Nature 2011
15

Flexible use of nuclear import pathways by HIV-1.
KyeongEun Lee, Zandrea Ambrose, Thomas D Martin, Ilker Oztop, Alok Mulky, John G Julias, Nick Vandegraaff, Joerg G Baumann, Rui Wang, Wendy Yuen,[...]. Cell Host Microbe 2010
296
14

Identification of a reservoir for HIV-1 in patients on highly active antiretroviral therapy.
D Finzi, M Hermankova, T Pierson, L M Carruth, C Buck, R E Chaisson, T C Quinn, K Chadwick, J Margolick, R Brookmeyer,[...]. Science 1997
13

Complementary assays reveal a relationship between HIV-1 uncoating and reverse transcription.
Amy E Hulme, Omar Perez, Thomas J Hope. Proc Natl Acad Sci U S A 2011
173
12

Vpx relieves inhibition of HIV-1 infection of macrophages mediated by the SAMHD1 protein.
Kasia Hrecka, Caili Hao, Magda Gierszewska, Selene K Swanson, Malgorzata Kesik-Brodacka, Smita Srivastava, Laurence Florens, Michael P Washburn, Jacek Skowronski. Nature 2011
830
12


Direct Visualization of HIV-1 Replication Intermediates Shows that Capsid and CPSF6 Modulate HIV-1 Intra-nuclear Invasion and Integration.
Christopher R Chin, Jill M Perreira, George Savidis, Jocelyn M Portmann, Aaron M Aker, Eric M Feeley, Miles C Smith, Abraham L Brass. Cell Rep 2015
89
13

Quantitative microscopy of functional HIV post-entry complexes reveals association of replication with the viral capsid.
Ke Peng, Walter Muranyi, Bärbel Glass, Vibor Laketa, Stephen R Yant, Luong Tsai, Tomas Cihlar, Barbara Müller, Hans-Georg Kräusslich. Elife 2014
115
11


HIV-1 capsid: the multifaceted key player in HIV-1 infection.
Edward M Campbell, Thomas J Hope. Nat Rev Microbiol 2015
205
11

A third-generation lentivirus vector with a conditional packaging system.
T Dull, R Zufferey, M Kelly, R J Mandel, M Nguyen, D Trono, L Naldini. J Virol 1998
10

HIV integration targeting: a pathway involving Transportin-3 and the nuclear pore protein RanBP2.
Karen E Ocwieja, Troy L Brady, Keshet Ronen, Alyssa Huegel, Shoshannah L Roth, Torsten Schaller, Leo C James, Greg J Towers, John A T Young, Sumit K Chanda,[...]. PLoS Pathog 2011
163
10

Replication-competent noninduced proviruses in the latent reservoir increase barrier to HIV-1 cure.
Ya-Chi Ho, Liang Shan, Nina N Hosmane, Jeffrey Wang, Sarah B Laskey, Daniel I S Rosenbloom, Jun Lai, Joel N Blankson, Janet D Siliciano, Robert F Siliciano. Cell 2013
826
10

The role of unintegrated DNA in HIV infection.
Richard D Sloan, Mark A Wainberg. Retrovirology 2011
93
10



HIV-1 evades innate immune recognition through specific cofactor recruitment.
Jane Rasaiyaah, Choon Ping Tan, Adam J Fletcher, Amanda J Price, Caroline Blondeau, Laura Hilditch, David A Jacques, David L Selwood, Leo C James, Mahdad Noursadeghi,[...]. Nature 2013
288
9

HIV-1 integration in the human genome favors active genes and local hotspots.
Astrid R W Schröder, Paul Shinn, Huaming Chen, Charles Berry, Joseph R Ecker, Frederic Bushman. Cell 2002
9


Quantification of latent tissue reservoirs and total body viral load in HIV-1 infection.
T W Chun, L Carruth, D Finzi, X Shen, J A DiGiuseppe, H Taylor, M Hermankova, K Chadwick, J Margolick, T C Quinn,[...]. Nature 1997
9

Formation of a human immunodeficiency virus type 1 core of optimal stability is crucial for viral replication.
Brett M Forshey, Uta von Schwedler, Wesley I Sundquist, Christopher Aiken. J Virol 2002
378
9

Quantitative analysis of the time-course of viral DNA forms during the HIV-1 life cycle.
Soundasse Munir, Sylvain Thierry, Frédéric Subra, Eric Deprez, Olivier Delelis. Retrovirology 2013
44
20

Defective proviruses rapidly accumulate during acute HIV-1 infection.
Katherine M Bruner, Alexandra J Murray, Ross A Pollack, Mary G Soliman, Sarah B Laskey, Adam A Capoferri, Jun Lai, Matthew C Strain, Steven M Lada, Rebecca Hoh,[...]. Nat Med 2016
371
9

A critical role for alternative polyadenylation factor CPSF6 in targeting HIV-1 integration to transcriptionally active chromatin.
Gregory A Sowd, Erik Serrao, Hao Wang, Weifeng Wang, Hind J Fadel, Eric M Poeschla, Alan N Engelman. Proc Natl Acad Sci U S A 2016
120
9

CPSF6 defines a conserved capsid interface that modulates HIV-1 replication.
Amanda J Price, Adam J Fletcher, Torsten Schaller, Tom Elliott, KyeongEun Lee, Vineet N KewalRamani, Jason W Chin, Greg J Towers, Leo C James. PLoS Pathog 2012
157
9


Capsid-CPSF6 Interaction Licenses Nuclear HIV-1 Trafficking to Sites of Viral DNA Integration.
Vasudevan Achuthan, Jill M Perreira, Gregory A Sowd, Maritza Puray-Chavez, William M McDougall, Adriana Paulucci-Holthauzen, Xiaolin Wu, Hind J Fadel, Eric M Poeschla, Asha S Multani,[...]. Cell Host Microbe 2018
71
12

Specific recognition and accelerated uncoating of retroviral capsids by the TRIM5alpha restriction factor.
Matthew Stremlau, Michel Perron, Mark Lee, Yuan Li, Byeongwoon Song, Hassan Javanbakht, Felipe Diaz-Griffero, Donovan J Anderson, Wesley I Sundquist, Joseph Sodroski. Proc Natl Acad Sci U S A 2006
555
8


LEDGF/p75 functions downstream from preintegration complex formation to effect gene-specific HIV-1 integration.
Ming-Chieh Shun, Nidhanapati K Raghavendra, Nick Vandegraaff, Janet E Daigle, Siobhan Hughes, Paul Kellam, Peter Cherepanov, Alan Engelman. Genes Dev 2007
329
8

Nup153 and Nup98 bind the HIV-1 core and contribute to the early steps of HIV-1 replication.
Francesca Di Nunzio, Thomas Fricke, Annarita Miccio, Jose Carlos Valle-Casuso, Patricio Perez, Philippe Souque, Ermanno Rizzi, Marco Severgnini, Fulvio Mavilio, Pierre Charneau,[...]. Virology 2013
96
8

Inhibition of reverse transcriptase activity increases stability of the HIV-1 core.
Yang Yang, Thomas Fricke, Felipe Diaz-Griffero. J Virol 2013
64
12

Recovery of replication-competent HIV despite prolonged suppression of plasma viremia.
J K Wong, M Hezareh, H F Günthard, D V Havlir, C C Ignacio, C A Spina, D D Richman. Science 1997
8

Structural basis of HIV-1 capsid recognition by PF74 and CPSF6.
Akash Bhattacharya, Steven L Alam, Thomas Fricke, Kaneil Zadrozny, Jaroslaw Sedzicki, Alexander B Taylor, Borries Demeler, Owen Pornillos, Barbie K Ganser-Pornillos, Felipe Diaz-Griffero,[...]. Proc Natl Acad Sci U S A 2014
136
8

Long-term follow-up studies confirm the stability of the latent reservoir for HIV-1 in resting CD4+ T cells.
Janet D Siliciano, Joleen Kajdas, Diana Finzi, Thomas C Quinn, Karen Chadwick, Joseph B Margolick, Colin Kovacs, Stephen J Gange, Robert F Siliciano. Nat Med 2003
8

HIV reservoir size and persistence are driven by T cell survival and homeostatic proliferation.
Nicolas Chomont, Mohamed El-Far, Petronela Ancuta, Lydie Trautmann, Francesco A Procopio, Bader Yassine-Diab, Geneviève Boucher, Mohamed-Rachid Boulassel, Georges Ghattas, Jason M Brenchley,[...]. Nat Med 2009
8

Intrinsic host restrictions to HIV-1 and mechanisms of viral escape.
Viviana Simon, Nicolin Bloch, Nathaniel R Landau. Nat Immunol 2015
184
8

Evidence for direct involvement of the capsid protein in HIV infection of nondividing cells.
Masahiro Yamashita, Omar Perez, Thomas J Hope, Michael Emerman. PLoS Pathog 2007
154
8

Comparative analysis of measures of viral reservoirs in HIV-1 eradication studies.
Susanne Eriksson, Erin H Graf, Viktor Dahl, Matthew C Strain, Steven A Yukl, Elena S Lysenko, Ronald J Bosch, Jun Lai, Stanley Chioma, Fatemeh Emad,[...]. PLoS Pathog 2013
399
8

Detecting HIV-1 integration by repetitive-sampling Alu-gag PCR.
Megan K Liszewski, Jianqing J Yu, Una O'Doherty. Methods 2009
115
8

A sensitive and specific enzyme-based assay detecting HIV-1 virion fusion in primary T lymphocytes.
Marielle Cavrois, Carlos De Noronha, Warner C Greene. Nat Biotechnol 2002
361
8




Nuclear architecture dictates HIV-1 integration site selection.
Bruna Marini, Attila Kertesz-Farkas, Hashim Ali, Bojana Lucic, Kamil Lisek, Lara Manganaro, Sandor Pongor, Roberto Luzzati, Alessandra Recchia, Fulvio Mavilio,[...]. Nature 2015
187
7

HIV-1 reverse transcription.
Wei-Shau Hu, Stephen H Hughes. Cold Spring Harb Perspect Med 2012
198
7

HIV DNA integration.
Robert Craigie, Frederic D Bushman. Cold Spring Harb Perspect Med 2012
168
7

Differential effects of human immunodeficiency virus type 1 capsid and cellular factors nucleoporin 153 and LEDGF/p75 on the efficiency and specificity of viral DNA integration.
Yasuhiro Koh, Xiaolin Wu, Andrea L Ferris, Kenneth A Matreyek, Steven J Smith, KyeongEun Lee, Vineet N KewalRamani, Stephen H Hughes, Alan Engelman. J Virol 2013
84
8

Early establishment of a pool of latently infected, resting CD4(+) T cells during primary HIV-1 infection.
T W Chun, D Engel, M M Berrey, T Shea, L Corey, A S Fauci. Proc Natl Acad Sci U S A 1998
609
7


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.