A citation-based method for searching scientific literature

J P Hugot, M Chamaillard, H Zouali, S Lesage, J P Cézard, J Belaiche, S Almer, C Tysk, C A O'Morain, M Gassull, V Binder, Y Finkel, A Cortot, R Modigliani, P Laurent-Puig, C Gower-Rousseau, J Macry, J F Colombel, M Sahbatou, G Thomas. Nature 2001
Times Cited: 3991







List of co-cited articles
1273 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


A frameshift mutation in NOD2 associated with susceptibility to Crohn's disease.
Y Ogura, D K Bonen, N Inohara, D L Nicolae, F F Chen, R Ramos, H Britton, T Moran, R Karaliuskas, R H Duerr,[...]. Nature 2001
54

Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease.
Luke Jostins, Stephan Ripke, Rinse K Weersma, Richard H Duerr, Dermot P McGovern, Ken Y Hui, James C Lee, L Philip Schumm, Yashoda Sharma, Carl A Anderson,[...]. Nature 2012
20

Association analyses identify 38 susceptibility loci for inflammatory bowel disease and highlight shared genetic risk across populations.
Jimmy Z Liu, Suzanne van Sommeren, Hailiang Huang, Siew C Ng, Rudi Alberts, Atsushi Takahashi, Stephan Ripke, James C Lee, Luke Jostins, Tejas Shah,[...]. Nat Genet 2015
17

A genome-wide association scan of nonsynonymous SNPs identifies a susceptibility variant for Crohn disease in ATG16L1.
Jochen Hampe, Andre Franke, Philip Rosenstiel, Andreas Till, Markus Teuber, Klaus Huse, Mario Albrecht, Gabriele Mayr, Francisco M De La Vega, Jason Briggs,[...]. Nat Genet 2007
14

Nod2 is a general sensor of peptidoglycan through muramyl dipeptide (MDP) detection.
Stephen E Girardin, Ivo G Boneca, Jérôme Viala, Mathias Chamaillard, Agnès Labigne, Gilles Thomas, Dana J Philpott, Philippe J Sansonetti. J Biol Chem 2003
13

NOD1 and NOD2: signaling, host defense, and inflammatory disease.
Roberta Caruso, Neil Warner, Naohiro Inohara, Gabriel Núñez. Immunity 2014
346
12

Host recognition of bacterial muramyl dipeptide mediated through NOD2. Implications for Crohn's disease.
Naohiro Inohara, Yasunori Ogura, Ana Fontalba, Olga Gutierrez, Fernando Pons, Javier Crespo, Koichi Fukase, Seiichi Inamura, Shoichi Kusumoto, Masahito Hashimoto,[...]. J Biol Chem 2003
12

Genome-wide association study identifies new susceptibility loci for Crohn disease and implicates autophagy in disease pathogenesis.
John D Rioux, Ramnik J Xavier, Kent D Taylor, Mark S Silverberg, Philippe Goyette, Alan Huett, Todd Green, Petric Kuballa, M Michael Barmada, Lisa Wu Datta,[...]. Nat Genet 2007
11

Nod1 and Nod2 direct autophagy by recruiting ATG16L1 to the plasma membrane at the site of bacterial entry.
Leonardo H Travassos, Leticia A M Carneiro, Mahendrasingh Ramjeet, Seamus Hussey, Yun-Gi Kim, João G Magalhães, Linda Yuan, Fraser Soares, Evelyn Chea, Lionel Le Bourhis,[...]. Nat Immunol 2010
888
11

Sequence variants in the autophagy gene IRGM and multiple other replicating loci contribute to Crohn's disease susceptibility.
Miles Parkes, Jeffrey C Barrett, Natalie J Prescott, Mark Tremelling, Carl A Anderson, Sheila A Fisher, Roland G Roberts, Elaine R Nimmo, Fraser R Cummings, Dianne Soars,[...]. Nat Genet 2007
874
11

CARD15 mutations in Blau syndrome.
C Miceli-Richard, S Lesage, M Rybojad, A M Prieur, S Manouvrier-Hanu, R Häfner, M Chamaillard, H Zouali, G Thomas, J P Hugot. Nat Genet 2001
691
11

Worldwide incidence and prevalence of inflammatory bowel disease in the 21st century: a systematic review of population-based studies.
Siew C Ng, Hai Yun Shi, Nima Hamidi, Fox E Underwood, Whitney Tang, Eric I Benchimol, Remo Panaccione, Subrata Ghosh, Justin C Y Wu, Francis K L Chan,[...]. Lancet 2017
11

Molecular-phylogenetic characterization of microbial community imbalances in human inflammatory bowel diseases.
Daniel N Frank, Allison L St Amand, Robert A Feldman, Edgar C Boedeker, Noam Harpaz, Norman R Pace. Proc Natl Acad Sci U S A 2007
10

Crohn's disease.
Joana Torres, Saurabh Mehandru, Jean-Frédéric Colombel, Laurent Peyrin-Biroulet. Lancet 2017
633
10

Nod2-dependent regulation of innate and adaptive immunity in the intestinal tract.
Koichi S Kobayashi, Mathias Chamaillard, Yasunori Ogura, Octavian Henegariu, Naohiro Inohara, Gabriel Nuñez, Richard A Flavell. Science 2005
9


The treatment-naive microbiome in new-onset Crohn's disease.
Dirk Gevers, Subra Kugathasan, Lee A Denson, Yoshiki Vázquez-Baeza, Will Van Treuren, Boyu Ren, Emma Schwager, Dan Knights, Se Jin Song, Moran Yassour,[...]. Cell Host Microbe 2014
9

ATG16L1 and NOD2 interact in an autophagy-dependent antibacterial pathway implicated in Crohn's disease pathogenesis.
Craig R Homer, Amy L Richmond, Nancy A Rebert, Jean-Paul Achkar, Christine McDonald. Gastroenterology 2010
252
9

Faecalibacterium prausnitzii is an anti-inflammatory commensal bacterium identified by gut microbiota analysis of Crohn disease patients.
Harry Sokol, Bénédicte Pigneur, Laurie Watterlot, Omar Lakhdari, Luis G Bermúdez-Humarán, Jean-Jacques Gratadoux, Sébastien Blugeon, Chantal Bridonneau, Jean-Pierre Furet, Gérard Corthier,[...]. Proc Natl Acad Sci U S A 2008
9

Genome-wide association defines more than 30 distinct susceptibility loci for Crohn's disease.
Jeffrey C Barrett, Sarah Hansoul, Dan L Nicolae, Judy H Cho, Richard H Duerr, John D Rioux, Steven R Brant, Mark S Silverberg, Kent D Taylor, M Michael Barmada,[...]. Nat Genet 2008
9

NOD2 stimulation induces autophagy in dendritic cells influencing bacterial handling and antigen presentation.
Rachel Cooney, John Baker, Oliver Brain, Benedicte Danis, Tica Pichulik, Philip Allan, David J P Ferguson, Barry J Campbell, Derek Jewell, Alison Simmons. Nat Med 2010
726
9

A key role for autophagy and the autophagy gene Atg16l1 in mouse and human intestinal Paneth cells.
Ken Cadwell, John Y Liu, Sarah L Brown, Hiroyuki Miyoshi, Joy Loh, Jochen K Lennerz, Chieko Kishi, Wumesh Kc, Javier A Carrero, Steven Hunt,[...]. Nature 2008
8

Expression of NOD2 in Paneth cells: a possible link to Crohn's ileitis.
Y Ogura, S Lala, W Xin, E Smith, T A Dowds, F F Chen, E Zimmermann, M Tretiakova, J H Cho, J Hart,[...]. Gut 2003
326
8

A Crohn's disease variant in Atg16l1 enhances its degradation by caspase 3.
Aditya Murthy, Yun Li, Ivan Peng, Mike Reichelt, Anand Kumar Katakam, Rajkumar Noubade, Merone Roose-Girma, Jason DeVoss, Lauri Diehl, Robert R Graham,[...]. Nature 2014
237
8

The microbiome in inflammatory bowel disease: current status and the future ahead.
Aleksandar D Kostic, Ramnik J Xavier, Dirk Gevers. Gastroenterology 2014
850
8

Genome-wide association study implicates immune activation of multiple integrin genes in inflammatory bowel disease.
Katrina M de Lange, Loukas Moutsianas, James C Lee, Christopher A Lamb, Yang Luo, Nicholas A Kennedy, Luke Jostins, Daniel L Rice, Javier Gutierrez-Achury, Sun-Gou Ji,[...]. Nat Genet 2017
375
8

Genetics and pathogenesis of inflammatory bowel disease.
Bernard Khor, Agnès Gardet, Ramnik J Xavier. Nature 2011
7

CARD15/NOD2 mutational analysis and genotype-phenotype correlation in 612 patients with inflammatory bowel disease.
Suzanne Lesage, Habib Zouali, Jean-Pierre Cézard, Jean-Frédéric Colombel, Jacques Belaiche, Sven Almer, Curt Tysk, Colm O'Morain, Miquel Gassull, Vibeke Binder,[...]. Am J Hum Genet 2002
744
7

Genome-wide meta-analysis increases to 71 the number of confirmed Crohn's disease susceptibility loci.
Andre Franke, Dermot P B McGovern, Jeffrey C Barrett, Kai Wang, Graham L Radford-Smith, Tariq Ahmad, Charlie W Lees, Tobias Balschun, James Lee, Rebecca Roberts,[...]. Nat Genet 2010
7

XBP1 links ER stress to intestinal inflammation and confers genetic risk for human inflammatory bowel disease.
Arthur Kaser, Ann-Hwee Lee, Andre Franke, Jonathan N Glickman, Sebastian Zeissig, Herbert Tilg, Edward E S Nieuwenhuis, Darren E Higgins, Stefan Schreiber, Laurie H Glimcher,[...]. Cell 2008
937
7

Nod1 detects a unique muropeptide from gram-negative bacterial peptidoglycan.
Stephen E Girardin, Ivo G Boneca, Leticia A M Carneiro, Aude Antignac, Muguette Jéhanno, Jérôme Viala, Karsten Tedin, Muhamed-Kheir Taha, Agnes Labigne, Ulrich Zähringer,[...]. Science 2003
7

NOD proteins: regulators of inflammation in health and disease.
Dana J Philpott, Matthew T Sorbara, Susan J Robertson, Kenneth Croitoru, Stephen E Girardin. Nat Rev Immunol 2014
363
7

Nod2, a Nod1/Apaf-1 family member that is restricted to monocytes and activates NF-kappaB.
Y Ogura, N Inohara, A Benito, F F Chen, S Yamaoka, G Nunez. J Biol Chem 2001
7

NOD2 (CARD15) mutations in Crohn's disease are associated with diminished mucosal alpha-defensin expression.
J Wehkamp, J Harder, M Weichenthal, M Schwab, E Schäffeler, M Schlee, K R Herrlinger, A Stallmach, F Noack, P Fritz,[...]. Gut 2004
580
7

Inherited determinants of Crohn's disease and ulcerative colitis phenotypes: a genetic association study.
Isabelle Cleynen, Gabrielle Boucher, Luke Jostins, L Philip Schumm, Sebastian Zeissig, Tariq Ahmad, Vibeke Andersen, Jane M Andrews, Vito Annese, Stephan Brand,[...]. Lancet 2016
365
7

Crohn's disease and the NOD2 gene: a role for paneth cells.
Sanjay Lala, Yasunori Ogura, Caroline Osborne, Sok Ying Hor, Annabel Bromfield, Susan Davies, Olagunju Ogunbiyi, Gabriel Nuñez, Satish Keshav. Gastroenterology 2003
394
7

Multi-omics of the gut microbial ecosystem in inflammatory bowel diseases.
Jason Lloyd-Price, Cesar Arze, Ashwin N Ananthakrishnan, Melanie Schirmer, Julian Avila-Pacheco, Tiffany W Poon, Elizabeth Andrews, Nadim J Ajami, Kevin S Bonham, Colin J Brislawn,[...]. Nature 2019
549
7

A decrease of the butyrate-producing species Roseburia hominis and Faecalibacterium prausnitzii defines dysbiosis in patients with ulcerative colitis.
Kathleen Machiels, Marie Joossens, João Sabino, Vicky De Preter, Ingrid Arijs, Venessa Eeckhaut, Vera Ballet, Karolien Claes, Filip Van Immerseel, Kristin Verbeke,[...]. Gut 2014
758
7


Mend Your Fences: The Epithelial Barrier and its Relationship With Mucosal Immunity in Inflammatory Bowel Disease.
Eva Martini, Susanne M Krug, Britta Siegmund, Markus F Neurath, Christoph Becker. Cell Mol Gastroenterol Hepatol 2017
190
7

High prevalence of adherent-invasive Escherichia coli associated with ileal mucosa in Crohn's disease.
Arlette Darfeuille-Michaud, Jérôme Boudeau, Philippe Bulois, Christel Neut, Anne-Lise Glasser, Nicolas Barnich, Marie-Agnès Bringer, Alexander Swidsinski, Laurent Beaugerie, Jean-Frédéric Colombel. Gastroenterology 2004
966
6

Crohn's disease.
Daniel C Baumgart, William J Sandborn. Lancet 2012
6

NOD2-mediated dysbiosis predisposes mice to transmissible colitis and colorectal cancer.
Aurélie Couturier-Maillard, Thomas Secher, Ateequr Rehman, Sylvain Normand, Adèle De Arcangelis, Robert Haesler, Ludovic Huot, Teddy Grandjean, Aude Bressenot, Anne Delanoye-Crespin,[...]. J Clin Invest 2013
357
6

Paneth cells as a site of origin for intestinal inflammation.
Timon E Adolph, Michal F Tomczak, Lukas Niederreiter, Hyun-Jeong Ko, Janne Böck, Eduardo Martinez-Naves, Jonathan N Glickman, Markus Tschurtschenthaler, John Hartwig, Shuhei Hosomi,[...]. Nature 2013
409
6

Inflammatory bowel disease and mutations affecting the interleukin-10 receptor.
Erik-Oliver Glocker, Daniel Kotlarz, Kaan Boztug, E Michael Gertz, Alejandro A Schäffer, Fatih Noyan, Mario Perro, Jana Diestelhorst, Anna Allroth, Dhaarini Murugan,[...]. N Engl J Med 2009
908
6

NOD-like receptors: role in innate immunity and inflammatory disease.
Grace Chen, Michael H Shaw, Yun-Gi Kim, Gabriel Nuñez. Annu Rev Pathol 2009
472
6


A critical role of RICK/RIP2 polyubiquitination in Nod-induced NF-kappaB activation.
Mizuho Hasegawa, Yukari Fujimoto, Peter C Lucas, Hiroyasu Nakano, Koichi Fukase, Gabriel Núñez, Naohiro Inohara. EMBO J 2008
360
6

Disease-causing mutations in the XIAP BIR2 domain impair NOD2-dependent immune signalling.
Rune Busk Damgaard, Berthe Katrine Fiil, Carsten Speckmann, Monica Yabal, Udo zur Stadt, Simon Bekker-Jensen, Philipp J Jost, Stephan Ehl, Niels Mailand, Mads Gyrd-Hansen. EMBO Mol Med 2013
102
6

The ubiquitin ligase XIAP recruits LUBAC for NOD2 signaling in inflammation and innate immunity.
Rune Busk Damgaard, Ueli Nachbur, Monica Yabal, Wendy Wei-Lynn Wong, Berthe Katrine Fiil, Mischa Kastirr, Eva Rieser, James Arthur Rickard, Aleksandra Bankovacki, Christian Peschel,[...]. Mol Cell 2012
249
6


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.