A citation-based method for searching scientific literature

J Rutter, M Reick, L C Wu, S L McKnight. Science 2001
Times Cited: 697







List of co-cited articles
1616 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Circadian clock feedback cycle through NAMPT-mediated NAD+ biosynthesis.
Kathryn Moynihan Ramsey, Jun Yoshino, Cynthia S Brace, Dana Abrassart, Yumiko Kobayashi, Biliana Marcheva, Hee-Kyung Hong, Jason L Chong, Ethan D Buhr, Choogon Lee,[...]. Science 2009
774
38

Circadian control of the NAD+ salvage pathway by CLOCK-SIRT1.
Yasukazu Nakahata, Saurabh Sahar, Giuseppe Astarita, Milota Kaluzova, Paolo Sassone-Corsi. Science 2009
831
36

SIRT1 regulates circadian clock gene expression through PER2 deacetylation.
Gad Asher, David Gatfield, Markus Stratmann, Hans Reinke, Charna Dibner, Florian Kreppel, Raul Mostoslavsky, Frederick W Alt, Ueli Schibler. Cell 2008
932
35

The NAD+-dependent deacetylase SIRT1 modulates CLOCK-mediated chromatin remodeling and circadian control.
Yasukazu Nakahata, Milota Kaluzova, Benedetto Grimaldi, Saurabh Sahar, Jun Hirayama, Danica Chen, Leonard P Guarente, Paolo Sassone-Corsi. Cell 2008
969
33

A circadian gene expression atlas in mammals: implications for biology and medicine.
Ray Zhang, Nicholas F Lahens, Heather I Ballance, Michael E Hughes, John B Hogenesch. Proc Natl Acad Sci U S A 2014
29

Circadian clock NAD+ cycle drives mitochondrial oxidative metabolism in mice.
Clara Bien Peek, Alison H Affinati, Kathryn Moynihan Ramsey, Hsin-Yu Kuo, Wei Yu, Laura A Sena, Olga Ilkayeva, Biliana Marcheva, Yumiko Kobayashi, Chiaki Omura,[...]. Science 2013
410
24

Circadian clocks in human red blood cells.
John S O'Neill, Akhilesh B Reddy. Nature 2011
527
24

AMPK regulates the circadian clock by cryptochrome phosphorylation and degradation.
Katja A Lamia, Uma M Sachdeva, Luciano DiTacchio, Elliot C Williams, Jacqueline G Alvarez, Daniel F Egan, Debbie S Vasquez, Henry Juguilon, Satchidananda Panda, Reuben J Shaw,[...]. Science 2009
599
24


Disruption of the clock components CLOCK and BMAL1 leads to hypoinsulinaemia and diabetes.
Biliana Marcheva, Kathryn Moynihan Ramsey, Ethan D Buhr, Yumiko Kobayashi, Hong Su, Caroline H Ko, Ganka Ivanova, Chiaki Omura, Shelley Mo, Martha H Vitaterna,[...]. Nature 2010
978
20

Peroxiredoxins are conserved markers of circadian rhythms.
Rachel S Edgar, Edward W Green, Yuwei Zhao, Gerben van Ooijen, Maria Olmedo, Ximing Qin, Yao Xu, Min Pan, Utham K Valekunja, Kevin A Feeney,[...]. Nature 2012
545
20

The Pentose Phosphate Pathway Regulates the Circadian Clock.
Guillaume Rey, Utham K Valekunja, Kevin A Feeney, Lisa Wulund, Nikolay B Milev, Alessandra Stangherlin, Laura Ansel-Bollepalli, Vidya Velagapudi, John S O'Neill, Akhilesh B Reddy. Cell Metab 2016
91
21

Coordinated transcription of key pathways in the mouse by the circadian clock.
Satchidananda Panda, Marina P Antoch, Brooke H Miller, Andrew I Su, Andrew B Schook, Marty Straume, Peter G Schultz, Steve A Kay, Joseph S Takahashi, John B Hogenesch. Cell 2002
20


The orphan nuclear receptor REV-ERBalpha controls circadian transcription within the positive limb of the mammalian circadian oscillator.
Nicolas Preitner, Francesca Damiola, Luis Lopez-Molina, Joszef Zakany, Denis Duboule, Urs Albrecht, Ueli Schibler. Cell 2002
19

High-fat diet disrupts behavioral and molecular circadian rhythms in mice.
Akira Kohsaka, Aaron D Laposky, Kathryn Moynihan Ramsey, Carmela Estrada, Corinne Joshu, Yumiko Kobayashi, Fred W Turek, Joseph Bass. Cell Metab 2007
980
18

Poly(ADP-ribose) polymerase 1 participates in the phase entrainment of circadian clocks to feeding.
Gad Asher, Hans Reinke, Matthias Altmeyer, Maria Gutierrez-Arcelus, Michael O Hottiger, Ueli Schibler. Cell 2010
259
17

Entrainment of the circadian clock in the liver by feeding.
K A Stokkan, S Yamazaki, H Tei, Y Sakaki, M Menaker. Science 2001
17

Early aging and age-related pathologies in mice deficient in BMAL1, the core componentof the circadian clock.
Roman V Kondratov, Anna A Kondratova, Victoria Y Gorbacheva, Olena V Vykhovanets, Marina P Antoch. Genes Dev 2006
755
16

Central and peripheral circadian clocks in mammals.
Jennifer A Mohawk, Carla B Green, Joseph S Takahashi. Annu Rev Neurosci 2012
16

Coordination of circadian timing in mammals.
Steven M Reppert, David R Weaver. Nature 2002
16

Transcriptional architecture and chromatin landscape of the core circadian clock in mammals.
Nobuya Koike, Seung-Hee Yoo, Hung-Chung Huang, Vivek Kumar, Choogon Lee, Tae-Kyung Kim, Joseph S Takahashi. Science 2012
898
15

A functional genomics strategy reveals Rora as a component of the mammalian circadian clock.
Trey K Sato, Satchidananda Panda, Loren J Miraglia, Teresa M Reyes, Radu D Rudic, Peter McNamara, Kinnery A Naik, Garret A FitzGerald, Steve A Kay, John B Hogenesch. Neuron 2004
737
15

Obesity and metabolic syndrome in circadian Clock mutant mice.
Fred W Turek, Corinne Joshu, Akira Kohsaka, Emily Lin, Ganka Ivanova, Erin McDearmon, Aaron Laposky, Sue Losee-Olson, Amy Easton, Dalan R Jensen,[...]. Science 2005
15


Circadian integration of metabolism and energetics.
Joseph Bass, Joseph S Takahashi. Science 2010
14

Pancreatic β cell enhancers regulate rhythmic transcription of genes controlling insulin secretion.
Mark Perelis, Biliana Marcheva, Kathryn Moynihan Ramsey, Matthew J Schipma, Alan L Hutchison, Akihiko Taguchi, Clara Bien Peek, Heekyung Hong, Wenyu Huang, Chiaki Omura,[...]. Science 2015
231
14

Role of the CLOCK protein in the mammalian circadian mechanism.
N Gekakis, D Staknis, H B Nguyen, F C Davis, L D Wilsbacher, D P King, J S Takahashi, C J Weitz. Science 1998
14

Time-restricted feeding without reducing caloric intake prevents metabolic diseases in mice fed a high-fat diet.
Megumi Hatori, Christopher Vollmers, Amir Zarrinpar, Luciano DiTacchio, Eric A Bushong, Shubhroz Gill, Mathias Leblanc, Amandine Chaix, Matthew Joens, James A J Fitzpatrick,[...]. Cell Metab 2012
14

Circadian rhythm of redox state regulates excitability in suprachiasmatic nucleus neurons.
Tongfei A Wang, Yanxun V Yu, Gubbi Govindaiah, Xiaoying Ye, Liana Artinian, Todd P Coleman, Jonathan V Sweedler, Charles L Cox, Martha U Gillette. Science 2012
148
13

The circadian clock regulates rhythmic activation of the NRF2/glutathione-mediated antioxidant defense pathway to modulate pulmonary fibrosis.
Vanja Pekovic-Vaughan, Julie Gibbs, Hikari Yoshitane, Nan Yang, Dharshika Pathiranage, Baoqiang Guo, Aya Sagami, Keiko Taguchi, David Bechtold, Andrew Loudon,[...]. Genes Dev 2014
172
13

Partitioning circadian transcription by SIRT6 leads to segregated control of cellular metabolism.
Selma Masri, Paul Rigor, Marlene Cervantes, Nicholas Ceglia, Carlos Sebastian, Cuiying Xiao, Manuel Roqueta-Rivera, Chuxia Deng, Timothy F Osborne, Raul Mostoslavsky,[...]. Cell 2014
195
13

mCRY1 and mCRY2 are essential components of the negative limb of the circadian clock feedback loop.
K Kume, M J Zylka, S Sriram, L P Shearman, D R Weaver, X Jin, E S Maywood, M H Hastings, S M Reppert. Cell 1999
13

Obesity in mice with adipocyte-specific deletion of clock component Arntl.
Georgios K Paschos, Salam Ibrahim, Wen-Liang Song, Takeshige Kunieda, Gregory Grant, Teresa M Reyes, Christopher A Bradfield, Cheryl H Vaughan, Michael Eiden, Mojgan Masoodi,[...]. Nat Med 2012
294
13

Cryptochrome mediates circadian regulation of cAMP signaling and hepatic gluconeogenesis.
Eric E Zhang, Yi Liu, Renaud Dentin, Pagkapol Y Pongsawakul, Andrew C Liu, Tsuyoshi Hirota, Dmitri A Nusinow, Xiujie Sun, Severine Landais, Yuzo Kodama,[...]. Nat Med 2010
360
13

Circadian gene expression in individual fibroblasts: cell-autonomous and self-sustained oscillators pass time to daughter cells.
Emi Nagoshi, Camille Saini, Christoph Bauer, Thierry Laroche, Felix Naef, Ueli Schibler. Cell 2004
706
12

Circadian Clock Interaction with HIF1α Mediates Oxygenic Metabolism and Anaerobic Glycolysis in Skeletal Muscle.
Clara Bien Peek, Daniel C Levine, Jonathan Cedernaes, Akihiko Taguchi, Yumiko Kobayashi, Stacy J Tsai, Nicolle A Bonar, Maureen R McNulty, Kathryn Moynihan Ramsey, Joseph Bass. Cell Metab 2017
187
12

NPAS2: a gas-responsive transcription factor.
Elhadji M Dioum, Jared Rutter, Jason R Tuckerman, Gonzalo Gonzalez, Marie-Alda Gilles-Gonzalez, Steven L McKnight. Science 2002
333
12

Extensive and divergent circadian gene expression in liver and heart.
Kai-Florian Storch, Ovidiu Lipan, Igor Leykin, N Viswanathan, Fred C Davis, Wing H Wong, Charles J Weitz. Nature 2002
12

Muscle insulin sensitivity and glucose metabolism are controlled by the intrinsic muscle clock.
Kenneth A Dyar, Stefano Ciciliot, Lauren E Wright, Rasmus S Biensø, Guidantonio M Tagliazucchi, Vishal R Patel, Mattia Forcato, Marcia I P Paz, Anders Gudiksen, Francesca Solagna,[...]. Mol Metab 2013
240
12

Regulation of circadian behaviour and metabolism by REV-ERB-α and REV-ERB-β.
Han Cho, Xuan Zhao, Megumi Hatori, Ruth T Yu, Grant D Barish, Michael T Lam, Ling-Wa Chong, Luciano DiTacchio, Annette R Atkins, Christopher K Glass,[...]. Nature 2012
686
12

NRF2 regulates core and stabilizing circadian clock loops, coupling redox and timekeeping in Mus musculus.
Ryan S Wible, Chidambaram Ramanathan, Carrie Hayes Sutter, Kristin M Olesen, Thomas W Kensler, Andrew C Liu, Thomas R Sutter. Elife 2018
58
20

Cryptochromes mediate rhythmic repression of the glucocorticoid receptor.
Katja A Lamia, Stephanie J Papp, Ruth T Yu, Grant D Barish, N Henriette Uhlenhaut, Johan W Jonker, Michael Downes, Ronald M Evans. Nature 2011
378
12

Reprogramming of the circadian clock by nutritional challenge.
Kristin L Eckel-Mahan, Vishal R Patel, Sara de Mateo, Ricardo Orozco-Solis, Nicholas J Ceglia, Saurabh Sahar, Sherry A Dilag-Penilla, Kenneth A Dyar, Pierre Baldi, Paolo Sassone-Corsi. Cell 2013
416
12

Atlas of Circadian Metabolism Reveals System-wide Coordination and Communication between Clocks.
Kenneth A Dyar, Dominik Lutter, Anna Artati, Nicholas J Ceglia, Yu Liu, Danny Armenta, Martin Jastroch, Sandra Schneider, Sara de Mateo, Marlene Cervantes,[...]. Cell 2018
162
12

Crosstalk between metabolism and circadian clocks.
Hans Reinke, Gad Asher. Nat Rev Mol Cell Biol 2019
228
12

Regulation of circadian behaviour and metabolism by synthetic REV-ERB agonists.
Laura A Solt, Yongjun Wang, Subhashis Banerjee, Travis Hughes, Douglas J Kojetin, Thomas Lundasen, Youseung Shin, Jin Liu, Michael D Cameron, Romain Noel,[...]. Nature 2012
495
11

A circadian rhythm orchestrated by histone deacetylase 3 controls hepatic lipid metabolism.
Dan Feng, Tao Liu, Zheng Sun, Anne Bugge, Shannon E Mullican, Theresa Alenghat, X Shirley Liu, Mitchell A Lazar. Science 2011
488
11

Time of feeding and the intrinsic circadian clock drive rhythms in hepatic gene expression.
Christopher Vollmers, Shubhroz Gill, Luciano DiTacchio, Sandhya R Pulivarthy, Hiep D Le, Satchidananda Panda. Proc Natl Acad Sci U S A 2009
477
11

Diurnal transcriptome atlas of a primate across major neural and peripheral tissues.
Ludovic S Mure, Hiep D Le, Giorgia Benegiamo, Max W Chang, Luis Rios, Ngalla Jillani, Maina Ngotho, Thomas Kariuki, Ouria Dkhissi-Benyahya, Howard M Cooper,[...]. Science 2018
336
11


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.