A citation-based method for searching scientific literature

S Rothenburg, F Koch-Nolte, A Rich, F Haag. Proc Natl Acad Sci U S A 2001
Times Cited: 102







List of co-cited articles
686 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Regulation of CSF1 promoter by the SWI/SNF-like BAF complex.
R Liu, H Liu, X Chen, M Kirby, P O Brown, K Zhao. Cell 2001
263
24

Timeline: Z-DNA: the long road to biological function.
Alexander Rich, Shuguang Zhang. Nat Rev Genet 2003
313
20

Cooperative activity of BRG1 and Z-DNA formation in chromatin remodeling.
Hong Liu, Niveen Mulholland, Haiqing Fu, Keji Zhao. Mol Cell Biol 2006
73
27

Crystal structure of the Zalpha domain of the human editing enzyme ADAR1 bound to left-handed Z-DNA.
T Schwartz, M A Rould, K Lowenhaupt, A Herbert, A Rich. Science 1999
249
19

Structure of the DLM-1-Z-DNA complex reveals a conserved family of Z-DNA-binding proteins.
T Schwartz, J Behlke, K Lowenhaupt, U Heinemann, A Rich. Nat Struct Biol 2001
184
18

Z-DNA-binding proteins can act as potent effectors of gene expression in vivo.
Doo-Byoung Oh, Yang-Gyun Kim, Alexander Rich. Proc Natl Acad Sci U S A 2002
98
18


A polymorphic microsatellite that mediates induction of PIG3 by p53.
Ana Contente, Alexandra Dittmer, Manuela C Koch, Judith Roth, Matthias Dobbelstein. Nat Genet 2002
185
14

Characterization of Z-DNA as a nucleosome-boundary element in yeast Saccharomyces cerevisiae.
Ben Wong, Shuai Chen, Jin-Ah Kwon, Alexander Rich. Proc Natl Acad Sci U S A 2007
47
29


The chemistry and biology of left-handed Z-DNA.
A Rich, A Nordheim, A H Wang. Annu Rev Biochem 1984
947
13

Initial sequencing and analysis of the human genome.
E S Lander, L M Linton, B Birren, C Nusbaum, M C Zody, J Baldwin, K Devon, K Dewar, M Doyle, W FitzHugh,[...]. Nature 2001
12


A role for Z-DNA binding in vaccinia virus pathogenesis.
Yang-Gyun Kim, Maneesha Muralinath, Teresa Brandt, Matthew Pearcy, Kevin Hauns, Ky Lowenhaupt, Bertram L Jacobs, Alexander Rich. Proc Natl Acad Sci U S A 2003
159
12

Molecular structure of a left-handed double helical DNA fragment at atomic resolution.
A H Wang, G J Quigley, F J Kolpak, J L Crawford, J H van Boom, G van der Marel, A Rich. Nature 1979
12

A Z-DNA binding domain present in the human editing enzyme, double-stranded RNA adenosine deaminase.
A Herbert, J Alfken, Y G Kim, I S Mian, K Nishikura, A Rich. Proc Natl Acad Sci U S A 1997
231
11

Abundant raw material for cis-regulatory evolution in humans.
Matthew V Rockman, Gregory A Wray. Mol Biol Evol 2002
287
11

Unstable tandem repeats in promoters confer transcriptional evolvability.
Marcelo D Vinces, Matthieu Legendre, Marina Caldara, Masaki Hagihara, Kevin J Verstrepen. Science 2009
215
11



Z-DNA, an active element in the genome.
Guliang Wang, Karen M Vasquez. Front Biosci 2007
69
14

The landscape of human STR variation.
Thomas Willems, Melissa Gymrek, Gareth Highnam, David Mittelman, Yaniv Erlich. Genome Res 2014
123
10

Abundant contribution of short tandem repeats to gene expression variation in humans.
Melissa Gymrek, Thomas Willems, Audrey Guilmatre, Haoyang Zeng, Barak Markus, Stoyan Georgiev, Mark J Daly, Alkes L Price, Jonathan K Pritchard, Andrew J Sharp,[...]. Nat Genet 2016
151
10


Shortened microsatellite d(CA)21 sequence down-regulates promoter activity of matrix metalloproteinase 9 gene.
S Shimajiri, N Arima, A Tanimoto, Y Murata, T Hamada, K Y Wang, Y Sasaguri. FEBS Lett 1999
160
9

Quantitative effects on gene silencing by allelic variation at a tetranucleotide microsatellite.
V Albanèse, N F Biguet, H Kiefer, E Bayard, J Mallet, R Meloni. Hum Mol Genet 2001
115
9


Microsatellite instability regulates transcription factor binding and gene expression.
Patricia Martin, Katherine Makepeace, Stuart A Hill, Derek W Hood, E Richard Moxon. Proc Natl Acad Sci U S A 2005
122
9

Polymorphic tandem repeats within gene promoters act as modifiers of gene expression and DNA methylation in humans.
Javier Quilez, Audrey Guilmatre, Paras Garg, Gareth Highnam, Melissa Gymrek, Yaniv Erlich, Ricky S Joshi, David Mittelman, Andrew J Sharp. Nucleic Acids Res 2016
53
16


Effect of Z-DNA on nucleosome placement.
M M Garner, G Felsenfeld. J Mol Biol 1987
86
9


A variable dinucleotide repeat in the CFTR gene contributes to phenotype diversity by forming RNA secondary structures that alter splicing.
Timothy W Hefferon, Joshua D Groman, Catherine E Yurk, Garry R Cutting. Proc Natl Acad Sci U S A 2004
97
8

Microsatellite tandem repeats are abundant in human promoters and are associated with regulatory elements.
Sterling Sawaya, Andrew Bagshaw, Emmanuel Buschiazzo, Pankaj Kumar, Shantanu Chowdhury, Michael A Black, Neil Gemmell. PLoS One 2013
90
8


A poxvirus protein forms a complex with left-handed Z-DNA: crystal structure of a Yatapoxvirus Zalpha bound to DNA.
Sung Chul Ha, Neratur K Lokanath, Dong Van Quyen, Chun Ai Wu, Ky Lowenhaupt, Alexander Rich, Yang-Gyun Kim, Kyeong Kyu Kim. Proc Natl Acad Sci U S A 2004
82
8

Crystal structure of a junction between B-DNA and Z-DNA reveals two extruded bases.
Sung Chul Ha, Ky Lowenhaupt, Alexander Rich, Yang-Gyun Kim, Kyeong Kyu Kim. Nature 2005
157
7


Z-DNA-forming sequences generate large-scale deletions in mammalian cells.
Guliang Wang, Laura A Christensen, Karen M Vasquez. Proc Natl Acad Sci U S A 2006
118
7

Intronic CA-repeat and CA-rich elements: a new class of regulators of mammalian alternative splicing.
Jingyi Hui, Lee-Hsueh Hung, Monika Heiner, Silke Schreiner, Norma Neumüller, Gregor Reither, Stefan A Haas, Albrecht Bindereif. EMBO J 2005
164
7

The overdue promise of short tandem repeat variation for heritability.
Maximilian O Press, Keisha D Carlson, Christine Queitsch. Trends Genet 2014
51
13

Polygenic inheritance and micro/minisatellites.
D E Comings. Mol Psychiatry 1998
95
6


Left-handed Z-DNA: structure and function.
A Herbert, A Rich. Genetica 1999
99
6

Supercoiling of the DNA template during transcription.
L F Liu, J C Wang. Proc Natl Acad Sci U S A 1987
6

Molecular cloning and characterisation of a fish PKR-like gene from cultured CAB cells induced by UV-inactivated virus.
Cheng-Yu Hu, Yi-Bing Zhang, Guo-Ping Huang, Qi-Ya Zhang, Jian-Fang Gui. Fish Shellfish Immunol 2004
68
8

Evidence that vaccinia virulence factor E3L binds to Z-DNA in vivo: Implications for development of a therapy for poxvirus infection.
Yang-Gyun Kim, Ky Lowenhaupt, Doo-Byoung Oh, Kyeong Kyu Kim, Alexander Rich. Proc Natl Acad Sci U S A 2004
75
8

Complex regulation of the human gene for the Z-DNA binding protein DLM-1.
Stefan Rothenburg, Thomas Schwartz, Friedrich Koch-Nolte, Friedrich Haag. Nucleic Acids Res 2002
39
15


CA-Repeat polymorphism in intron 1 of HSD11B2 : effects on gene expression and salt sensitivity.
A K Agarwal, G Giacchetti, G Lavery, H Nikkila, M Palermo, M Ricketts, C McTernan, G Bianchi, P Manunta, P Strazzullo,[...]. Hypertension 2000
109
6


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.