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List of co-cited articles
902 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Miniaturized integration of a fluorescence microscope.
Kunal K Ghosh, Laurie D Burns, Eric D Cocker, Axel Nimmerjahn, Yaniv Ziv, Abbas El Gamal, Mark J Schnitzer. Nat Methods 2011
438
40

Ultrasensitive fluorescent proteins for imaging neuronal activity.
Tsai-Wen Chen, Trevor J Wardill, Yi Sun, Stefan R Pulver, Sabine L Renninger, Amy Baohan, Eric R Schreiter, Rex A Kerr, Michael B Orger, Vivek Jayaraman,[...]. Nature 2013
35

Visually evoked activity in cortical cells imaged in freely moving animals.
Juergen Sawinski, Damian J Wallace, David S Greenberg, Silvie Grossmann, Winfried Denk, Jason N D Kerr. Proc Natl Acad Sci U S A 2009
131
32

Two-photon laser scanning fluorescence microscopy.
W Denk, J H Strickler, W W Webb. Science 1990
29

High-speed, miniaturized fluorescence microscopy in freely moving mice.
Benjamin A Flusberg, Axel Nimmerjahn, Eric D Cocker, Eran A Mukamel, Robert P J Barretto, Tony H Ko, Laurie D Burns, Juergen C Jung, Mark J Schnitzer. Nat Methods 2008
213
29

Fast high-resolution miniature two-photon microscopy for brain imaging in freely behaving mice.
Weijian Zong, Runlong Wu, Mingli Li, Yanhui Hu, Yijun Li, Jinghang Li, Hao Rong, Haitao Wu, Yangyang Xu, Yang Lu,[...]. Nat Methods 2017
140
28

Imaging large-scale neural activity with cellular resolution in awake, mobile mice.
Daniel A Dombeck, Anton N Khabbaz, Forrest Collman, Thomas L Adelman, David W Tank. Neuron 2007
611
24

Ultra-compact fiber-optic two-photon microscope for functional fluorescence imaging in vivo.
Christoph J Engelbrecht, Richard S Johnston, Eric J Seibel, Fritjof Helmchen. Opt Express 2008
142
21

A shared neural ensemble links distinct contextual memories encoded close in time.
Denise J Cai, Daniel Aharoni, Tristan Shuman, Justin Shobe, Jeremy Biane, Weilin Song, Brandon Wei, Michael Veshkini, Mimi La-Vu, Jerry Lou,[...]. Nature 2016
321
19

Long-term dynamics of CA1 hippocampal place codes.
Yaniv Ziv, Laurie D Burns, Eric D Cocker, Elizabeth O Hamel, Kunal K Ghosh, Lacey J Kitch, Abbas El Gamal, Mark J Schnitzer. Nat Neurosci 2013
430
17

Deep tissue two-photon microscopy.
Fritjof Helmchen, Winfried Denk. Nat Methods 2005
16

Functional imaging of hippocampal place cells at cellular resolution during virtual navigation.
Daniel A Dombeck, Christopher D Harvey, Lin Tian, Loren L Looger, David W Tank. Nat Neurosci 2010
398
16

In vivo brain imaging using a portable 2.9 g two-photon microscope based on a microelectromechanical systems scanning mirror.
Wibool Piyawattanametha, Eric D Cocker, Laurie D Burns, Robert P Barretto, Juergen C Jung, Hyejun Ra, Olav Solgaard, Mark J Schnitzer. Opt Lett 2009
73
21

In vivo two-photon calcium imaging of neuronal networks.
Christoph Stosiek, Olga Garaschuk, Knut Holthoff, Arthur Konnerth. Proc Natl Acad Sci U S A 2003
808
16

In vivo brain imaging using a portable 3.9 gram two-photon fluorescence microendoscope.
Benjamin A Flusberg, Juergen C Jung, Eric D Cocker, Erik P Anderson, Mark J Schnitzer. Opt Lett 2005
142
15

Fiber-optic fluorescence imaging.
Benjamin A Flusberg, Eric D Cocker, Wibool Piyawattanametha, Juergen C Jung, Eunice L M Cheung, Mark J Schnitzer. Nat Methods 2005
358
15

Imaging neural activity in worms, flies and mice with improved GCaMP calcium indicators.
Lin Tian, S Andrew Hires, Tianyi Mao, Daniel Huber, M Eugenia Chiappe, Sreekanth H Chalasani, Leopoldo Petreanu, Jasper Akerboom, Sean A McKinney, Eric R Schreiter,[...]. Nat Methods 2009
14

Intracellular dynamics of hippocampal place cells during virtual navigation.
Christopher D Harvey, Forrest Collman, Daniel A Dombeck, David W Tank. Nature 2009
504
13

In vivo three-photon microscopy of subcortical structures within an intact mouse brain.
Nicholas G Horton, Ke Wang, Demirhan Kobat, Catharine G Clark, Frank W Wise, Chris B Schaffer, Chris Xu. Nat Photonics 2013
491
13

Imaging calcium in neurons.
Christine Grienberger, Arthur Konnerth. Neuron 2012
574
13

Nonlinear magic: multiphoton microscopy in the biosciences.
Warren R Zipfel, Rebecca M Williams, Watt W Webb. Nat Biotechnol 2003
13

A large field of view two-photon mesoscope with subcellular resolution for in vivo imaging.
Nicholas James Sofroniew, Daniel Flickinger, Jonathan King, Karel Svoboda. Elife 2016
210
13

Sensitive red protein calcium indicators for imaging neural activity.
Hod Dana, Boaz Mohar, Yi Sun, Sujatha Narayan, Andrew Gordus, Jeremy P Hasseman, Getahun Tsegaye, Graham T Holt, Amy Hu, Deepika Walpita,[...]. Elife 2016
365
13

Long-term, high-resolution imaging in the mouse neocortex through a chronic cranial window.
Anthony Holtmaat, Tobias Bonhoeffer, David K Chow, Jyoti Chuckowree, Vincenzo De Paola, Sonja B Hofer, Mark Hübener, Tara Keck, Graham Knott, Wei-Chung A Lee,[...]. Nat Protoc 2009
544
12

An open source, wireless capable miniature microscope system.
William A Liberti, L Nathan Perkins, Daniel P Leman, Timothy J Gardner. J Neural Eng 2017
39
30

High-speed volumetric imaging of neuronal activity in freely moving rodents.
Oliver Skocek, Tobias Nöbauer, Lukas Weilguny, Francisca Martínez Traub, Chuying Naomi Xia, Maxim I Molodtsov, Abhinav Grama, Masahito Yamagata, Daniel Aharoni, David D Cox,[...]. Nat Methods 2018
45
26

Miniaturized two-photon microscope based on a flexible coherent fiber bundle and a gradient-index lens objective.
Werner Göbel, Jason N D Kerr, Axel Nimmerjahn, Fritjof Helmchen. Opt Lett 2004
134
11

Compact and flexible raster scanning multiphoton endoscope capable of imaging unstained tissue.
David R Rivera, Christopher M Brown, Dimitre G Ouzounov, Ina Pavlova, Demirhan Kobat, Watt W Webb, Chris Xu. Proc Natl Acad Sci U S A 2011
130
11

Fluorescent indicators for Ca2+ based on green fluorescent proteins and calmodulin.
A Miyawaki, J Llopis, R Heim, J M McCaffery, J A Adams, M Ikura, R Y Tsien. Nature 1997
10

Fast two-photon in vivo imaging with three-dimensional random-access scanning in large tissue volumes.
Gergely Katona, Gergely Szalay, Pál Maák, Attila Kaszás, Máté Veress, Dániel Hillier, Balázs Chiovini, E Sylvester Vizi, Botond Roska, Balázs Rózsa. Nat Methods 2012
195
10



In vivo mammalian brain imaging using one- and two-photon fluorescence microendoscopy.
Juergen C Jung, Amit D Mehta, Emre Aksay, Raymond Stepnoski, Mark J Schnitzer. J Neurophysiol 2004
201
10

Choice-specific sequences in parietal cortex during a virtual-navigation decision task.
Christopher D Harvey, Philip Coen, David W Tank. Nature 2012
466
10

Automated analysis of cellular signals from large-scale calcium imaging data.
Eran A Mukamel, Axel Nimmerjahn, Mark J Schnitzer. Neuron 2009
328
10

Visualizing hypothalamic network dynamics for appetitive and consummatory behaviors.
Joshua H Jennings, Randall L Ung, Shanna L Resendez, Alice M Stamatakis, Johnathon G Taylor, Jonathan Huang, Katie Veleta, Pranish A Kantak, Megumi Aita, Kelson Shilling-Scrivo,[...]. Cell 2015
270
10

Simultaneous Denoising, Deconvolution, and Demixing of Calcium Imaging Data.
Eftychios A Pnevmatikakis, Daniel Soudry, Yuanjun Gao, Timothy A Machado, Josh Merel, David Pfau, Thomas Reardon, Yu Mu, Clay Lacefield, Weijian Yang,[...]. Neuron 2016
313
10

Visualization of cortical, subcortical and deep brain neural circuit dynamics during naturalistic mammalian behavior with head-mounted microscopes and chronically implanted lenses.
Shanna L Resendez, Josh H Jennings, Randall L Ung, Vijay Mohan K Namboodiri, Zhe Charles Zhou, James M Otis, Hiroshi Nomura, Jenna A McHenry, Oksana Kosyk, Garret D Stuber. Nat Protoc 2016
115
10

In vivo imaging of neural activity.
Weijian Yang, Rafael Yuste. Nat Methods 2017
157
10


An optimized fluorescent probe for visualizing glutamate neurotransmission.
Jonathan S Marvin, Bart G Borghuis, Lin Tian, Joseph Cichon, Mark T Harnett, Jasper Akerboom, Andrew Gordus, Sabine L Renninger, Tsai-Wen Chen, Cornelia I Bargmann,[...]. Nat Methods 2013
447
9

Miniaturization of two-photon microscopy for imaging in freely moving animals.
Fritjof Helmchen, Winfried Denk, Jason N D Kerr. Cold Spring Harb Protoc 2013
38
23

Rational design of a high-affinity, fast, red calcium indicator R-CaMP2.
Masatoshi Inoue, Atsuya Takeuchi, Shin-ichiro Horigane, Masamichi Ohkura, Keiko Gengyo-Ando, Hajime Fujii, Satoshi Kamijo, Sayaka Takemoto-Kimura, Masanobu Kano, Junichi Nakai,[...]. Nat Methods 2015
142
9

Swept confocally-aligned planar excitation (SCAPE) microscopy for high speed volumetric imaging of behaving organisms.
Matthew B Bouchard, Venkatakaushik Voleti, César S Mendes, Clay Lacefield, Wesley B Grueber, Richard S Mann, Randy M Bruno, Elizabeth M C Hillman. Nat Photonics 2015
214
9


Thy1-GCaMP6 transgenic mice for neuronal population imaging in vivo.
Hod Dana, Tsai-Wen Chen, Amy Hu, Brenda C Shields, Caiying Guo, Loren L Looger, Douglas S Kim, Karel Svoboda. PLoS One 2014
212
9

Cellular level brain imaging in behaving mammals: an engineering approach.
Elizabeth J O Hamel, Benjamin F Grewe, Jones G Parker, Mark J Schnitzer. Neuron 2015
84
10

Fiber-optic scanning two-photon fluorescence endoscope.
Mon Thiri Myaing, Daniel J MacDonald, Xingde Li. Opt Lett 2006
146
9

A compact fiber-optic SHG scanning endomicroscope and its application to visualize cervical remodeling during pregnancy.
Yuying Zhang, Meredith L Akins, Kartikeya Murari, Jiefeng Xi, Ming-Jun Li, Katherine Luby-Phelps, Mala Mahendroo, Xingde Li. Proc Natl Acad Sci U S A 2012
83
10

Minimally invasive microendoscopy system for in vivo functional imaging of deep nuclei in the mouse brain.
Miriam E Bocarsly, Wan-Chen Jiang, Chen Wang, Joshua T Dudman, Na Ji, Yeka Aponte. Biomed Opt Express 2015
45
20


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.