Job Dekker, Karsten Rippe, Martijn Dekker, Nancy Kleckner. Science 2002
Times Cited: 2145
Times Cited: 2145
Times Cited
Times Co-cited
Similarity
Comprehensive mapping of long-range interactions reveals folding principles of the human genome.
Erez Lieberman-Aiden, Nynke L van Berkum, Louise Williams, Maxim Imakaev, Tobias Ragoczy, Agnes Telling, Ido Amit, Bryan R Lajoie, Peter J Sabo, Michael O Dorschner,[...]. Science 2009
Erez Lieberman-Aiden, Nynke L van Berkum, Louise Williams, Maxim Imakaev, Tobias Ragoczy, Agnes Telling, Ido Amit, Bryan R Lajoie, Peter J Sabo, Michael O Dorschner,[...]. Science 2009
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A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping.
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Topological domains in mammalian genomes identified by analysis of chromatin interactions.
Jesse R Dixon, Siddarth Selvaraj, Feng Yue, Audrey Kim, Yan Li, Yin Shen, Ming Hu, Jun S Liu, Bing Ren. Nature 2012
Jesse R Dixon, Siddarth Selvaraj, Feng Yue, Audrey Kim, Yan Li, Yin Shen, Ming Hu, Jun S Liu, Bing Ren. Nature 2012
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Nuclear organization of active and inactive chromatin domains uncovered by chromosome conformation capture-on-chip (4C).
Marieke Simonis, Petra Klous, Erik Splinter, Yuri Moshkin, Rob Willemsen, Elzo de Wit, Bas van Steensel, Wouter de Laat. Nat Genet 2006
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Chromosome Conformation Capture Carbon Copy (5C): a massively parallel solution for mapping interactions between genomic elements.
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Spatial partitioning of the regulatory landscape of the X-inactivation centre.
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Single-cell Hi-C reveals cell-to-cell variability in chromosome structure.
Takashi Nagano, Yaniv Lubling, Tim J Stevens, Stefan Schoenfelder, Eitan Yaffe, Wendy Dean, Ernest D Laue, Amos Tanay, Peter Fraser. Nature 2013
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Formation of Chromosomal Domains by Loop Extrusion.
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Three-dimensional folding and functional organization principles of the Drosophila genome.
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Organizational principles of 3D genome architecture.
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An oestrogen-receptor-alpha-bound human chromatin interactome.
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HiChIP: efficient and sensitive analysis of protein-directed genome architecture.
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Super-resolution chromatin tracing reveals domains and cooperative interactions in single cells.
Bogdan Bintu, Leslie J Mateo, Jun-Han Su, Nicholas A Sinnott-Armstrong, Mirae Parker, Seon Kinrot, Kei Yamaya, Alistair N Boettiger, Xiaowei Zhuang. Science 2018
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Targeted Degradation of CTCF Decouples Local Insulation of Chromosome Domains from Genomic Compartmentalization.
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Chromatin extrusion explains key features of loop and domain formation in wild-type and engineered genomes.
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Cohesin Loss Eliminates All Loop Domains.
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Circular chromosome conformation capture (4C) uncovers extensive networks of epigenetically regulated intra- and interchromosomal interactions.
Zhihu Zhao, Gholamreza Tavoosidana, Mikael Sjölinder, Anita Göndör, Piero Mariano, Sha Wang, Chandrasekhar Kanduri, Magda Lezcano, Kuljeet Singh Sandhu, Umashankar Singh,[...]. Nat Genet 2006
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Two independent modes of chromatin organization revealed by cohesin removal.
Wibke Schwarzer, Nezar Abdennur, Anton Goloborodko, Aleksandra Pekowska, Geoffrey Fudenberg, Yann Loe-Mie, Nuno A Fonseca, Wolfgang Huber, Christian H Haering, Leonid Mirny,[...]. Nature 2017
Wibke Schwarzer, Nezar Abdennur, Anton Goloborodko, Aleksandra Pekowska, Geoffrey Fudenberg, Yann Loe-Mie, Nuno A Fonseca, Wolfgang Huber, Christian H Haering, Leonid Mirny,[...]. Nature 2017
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Higher-Order Inter-chromosomal Hubs Shape 3D Genome Organization in the Nucleus.
Sofia A Quinodoz, Noah Ollikainen, Barbara Tabak, Ali Palla, Jan Marten Schmidt, Elizabeth Detmar, Mason M Lai, Alexander A Shishkin, Prashant Bhat, Yodai Takei,[...]. Cell 2018
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Cell-cycle dynamics of chromosomal organization at single-cell resolution.
Takashi Nagano, Yaniv Lubling, Csilla Várnai, Carmel Dudley, Wing Leung, Yael Baran, Netta Mendelson Cohen, Steven Wingett, Peter Fraser, Amos Tanay. Nature 2017
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Spatial organization of chromatin domains and compartments in single chromosomes.
Siyuan Wang, Jun-Han Su, Brian J Beliveau, Bogdan Bintu, Jeffrey R Moffitt, Chao-ting Wu, Xiaowei Zhuang. Science 2016
Siyuan Wang, Jun-Han Su, Brian J Beliveau, Bogdan Bintu, Jeffrey R Moffitt, Chao-ting Wu, Xiaowei Zhuang. Science 2016
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3D structures of individual mammalian genomes studied by single-cell Hi-C.
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Tim J Stevens, David Lando, Srinjan Basu, Liam P Atkinson, Yang Cao, Steven F Lee, Martin Leeb, Kai J Wohlfahrt, Wayne Boucher, Aoife O'Shaughnessy-Kirwan,[...]. Nature 2017
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Single-nucleus Hi-C reveals unique chromatin reorganization at oocyte-to-zygote transition.
Ilya M Flyamer, Johanna Gassler, Maxim Imakaev, Hugo B Brandão, Sergey V Ulianov, Nezar Abdennur, Sergey V Razin, Leonid A Mirny, Kikuë Tachibana-Konwalski. Nature 2017
Ilya M Flyamer, Johanna Gassler, Maxim Imakaev, Hugo B Brandão, Sergey V Ulianov, Nezar Abdennur, Sergey V Razin, Leonid A Mirny, Kikuë Tachibana-Konwalski. Nature 2017
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Chromosome territories, nuclear architecture and gene regulation in mammalian cells.
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Multiscale 3D Genome Rewiring during Mouse Neural Development.
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Iterative correction of Hi-C data reveals hallmarks of chromosome organization.
Maxim Imakaev, Geoffrey Fudenberg, Rachel Patton McCord, Natalia Naumova, Anton Goloborodko, Bryan R Lajoie, Job Dekker, Leonid A Mirny. Nat Methods 2012
Maxim Imakaev, Geoffrey Fudenberg, Rachel Patton McCord, Natalia Naumova, Anton Goloborodko, Bryan R Lajoie, Job Dekker, Leonid A Mirny. Nat Methods 2012
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HiC-Pro: an optimized and flexible pipeline for Hi-C data processing.
Nicolas Servant, Nelle Varoquaux, Bryan R Lajoie, Eric Viara, Chong-Jian Chen, Jean-Philippe Vert, Edith Heard, Job Dekker, Emmanuel Barillot. Genome Biol 2015
Nicolas Servant, Nelle Varoquaux, Bryan R Lajoie, Eric Viara, Chong-Jian Chen, Jean-Philippe Vert, Edith Heard, Job Dekker, Emmanuel Barillot. Genome Biol 2015
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Disruptions of topological chromatin domains cause pathogenic rewiring of gene-enhancer interactions.
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Exploring the three-dimensional organization of genomes: interpreting chromatin interaction data.
Job Dekker, Marc A Marti-Renom, Leonid A Mirny. Nat Rev Genet 2013
Job Dekker, Marc A Marti-Renom, Leonid A Mirny. Nat Rev Genet 2013
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Mapping long-range promoter contacts in human cells with high-resolution capture Hi-C.
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Complex multi-enhancer contacts captured by genome architecture mapping.
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Resolving the 3D Landscape of Transcription-Linked Mammalian Chromatin Folding.
Tsung-Han S Hsieh, Claudia Cattoglio, Elena Slobodyanyuk, Anders S Hansen, Oliver J Rando, Robert Tjian, Xavier Darzacq. Mol Cell 2020
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Comparison of computational methods for Hi-C data analysis.
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Probabilistic modeling of Hi-C contact maps eliminates systematic biases to characterize global chromosomal architecture.
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Chromatin organization by an interplay of loop extrusion and compartmental segregation.
Johannes Nuebler, Geoffrey Fudenberg, Maxim Imakaev, Nezar Abdennur, Leonid A Mirny. Proc Natl Acad Sci U S A 2018
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Massively multiplex single-cell Hi-C.
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CRISPR Inversion of CTCF Sites Alters Genome Topology and Enhancer/Promoter Function.
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Three-dimensional genome structures of single diploid human cells.
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Chromatin Domains: The Unit of Chromosome Organization.
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Super-resolution imaging reveals distinct chromatin folding for different epigenetic states.
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Heterochromatin drives compartmentalization of inverted and conventional nuclei.
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Chromatin architecture reorganization during stem cell differentiation.
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ChromEMT: Visualizing 3D chromatin structure and compaction in interphase and mitotic cells.
Horng D Ou, Sébastien Phan, Thomas J Deerinck, Andrea Thor, Mark H Ellisman, Clodagh C O'Shea. Science 2017
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Human cohesin compacts DNA by loop extrusion.
Yoori Kim, Zhubing Shi, Hongshan Zhang, Ilya J Finkelstein, Hongtao Yu. Science 2019
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A pathway for mitotic chromosome formation.
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Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.