A citation-based method for searching scientific literature

Gregory Golling, Adam Amsterdam, Zhaoxia Sun, Marcelo Antonelli, Ernesto Maldonado, Wenbiao Chen, Shawn Burgess, Maryann Haldi, Karen Artzt, Sarah Farrington, Shuh-Yow Lin, Robert M Nissen, Nancy Hopkins. Nat Genet 2002
Times Cited: 407







List of co-cited articles
767 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Identification of 315 genes essential for early zebrafish development.
Adam Amsterdam, Robert M Nissen, Zhaoxia Sun, Eric C Swindell, Sarah Farrington, Nancy Hopkins. Proc Natl Acad Sci U S A 2004
587
26

A large-scale insertional mutagenesis screen in zebrafish.
A Amsterdam, S Burgess, G Golling, W Chen, Z Sun, K Townsend, S Farrington, M Haldi, N Hopkins. Genes Dev 1999
356
22

The zebrafish reference genome sequence and its relationship to the human genome.
Kerstin Howe, Matthew D Clark, Carlos F Torroja, James Torrance, Camille Berthelot, Matthieu Muffato, John E Collins, Sean Humphray, Karen McLaren, Lucy Matthews,[...]. Nature 2013
21

A genetic screen for mutations affecting embryogenesis in zebrafish.
W Driever, L Solnica-Krezel, A F Schier, S C Neuhauss, J Malicki, D L Stemple, D Y Stainier, F Zwartkruis, S Abdelilah, Z Rangini,[...]. Development 1996
920
21

The identification of genes with unique and essential functions in the development of the zebrafish, Danio rerio.
P Haffter, M Granato, M Brand, M C Mullins, M Hammerschmidt, D A Kane, J Odenthal, F J van Eeden, Y J Jiang, C P Heisenberg,[...]. Development 1996
21

Stages of embryonic development of the zebrafish.
C B Kimmel, W W Ballard, S R Kimmel, B Ullmann, T F Schilling. Dev Dyn 1995
20

Efficient genome editing in zebrafish using a CRISPR-Cas system.
Woong Y Hwang, Yanfang Fu, Deepak Reyon, Morgan L Maeder, Shengdar Q Tsai, Jeffry D Sander, Randall T Peterson, J-R Joanna Yeh, J Keith Joung. Nat Biotechnol 2013
16

Effective targeted gene 'knockdown' in zebrafish.
A Nasevicius, S C Ekker. Nat Genet 2000
15

Reverse genetic screening reveals poor correlation between morpholino-induced and mutant phenotypes in zebrafish.
F O Kok, M Shin, C-W Ni, A Gupta, A S Grosse, A van Impel, B C Kirchmaier, J Peterson-Maduro, G Kourkoulis, I Male,[...]. Dev Cell 2015
456
14

Efficient multiplex biallelic zebrafish genome editing using a CRISPR nuclease system.
Li-En Jao, Susan R Wente, Wenbiao Chen. Proc Natl Acad Sci U S A 2013
715
12

Animal models of human disease: zebrafish swim into view.
Graham J Lieschke, Peter D Currie. Nat Rev Genet 2007
12

Genetic compensation induced by deleterious mutations but not gene knockdowns.
Andrea Rossi, Zacharias Kontarakis, Claudia Gerri, Hendrik Nolte, Soraya Hölper, Marcus Krüger, Didier Y R Stainier. Nature 2015
647
12

A systematic genome-wide analysis of zebrafish protein-coding gene function.
Ross N W Kettleborough, Elisabeth M Busch-Nentwich, Steven A Harvey, Christopher M Dooley, Ewart de Bruijn, Freek van Eeden, Ian Sealy, Richard J White, Colin Herd, Isaac J Nijman,[...]. Nature 2013
343
11

High-throughput gene targeting and phenotyping in zebrafish using CRISPR/Cas9.
Gaurav K Varshney, Wuhong Pei, Matthew C LaFave, Jennifer Idol, Lisha Xu, Viviana Gallardo, Blake Carrington, Kevin Bishop, MaryPat Jones, Mingyu Li,[...]. Genome Res 2015
235
11

A large-scale zebrafish gene knockout resource for the genome-wide study of gene function.
Gaurav K Varshney, Jing Lu, Derek E Gildea, Haigen Huang, Wuhong Pei, Zhongan Yang, Sunny C Huang, David Schoenfeld, Nam H Pho, David Casero,[...]. Genome Res 2013
69
14

Genome editing with RNA-guided Cas9 nuclease in zebrafish embryos.
Nannan Chang, Changhong Sun, Lu Gao, Dan Zhu, Xiufei Xu, Xiaojun Zhu, Jing-Wei Xiong, Jianzhong Jeff Xi. Cell Res 2013
494
9

Heritable targeted gene disruption in zebrafish using designed zinc-finger nucleases.
Yannick Doyon, Jasmine M McCammon, Jeffrey C Miller, Farhoud Faraji, Catherine Ngo, George E Katibah, Rainier Amora, Toby D Hocking, Lei Zhang, Edward J Rebar,[...]. Nat Biotechnol 2008
593
9

Efficient mutagenesis by Cas9 protein-mediated oligonucleotide insertion and large-scale assessment of single-guide RNAs.
James A Gagnon, Eivind Valen, Summer B Thyme, Peng Huang, Laila Akhmetova, Andrea Pauli, Tessa G Montague, Steven Zimmerman, Constance Richter, Alexander F Schier. PLoS One 2014
435
9

Highly efficient CRISPR/Cas9-mediated knock-in in zebrafish by homology-independent DNA repair.
Thomas O Auer, Karine Duroure, Anne De Cian, Jean-Paul Concordet, Filippo Del Bene. Genome Res 2014
374
9

In vivo genome editing using a high-efficiency TALEN system.
Victoria M Bedell, Ying Wang, Jarryd M Campbell, Tanya L Poshusta, Colby G Starker, Randall G Krug, Wenfang Tan, Sumedha G Penheiter, Alvin C Ma, Anskar Y H Leung,[...]. Nature 2012
630
8

Insertional mutagenesis and rapid cloning of essential genes in zebrafish.
N Gaiano, A Amsterdam, K Kawakami, M Allende, T Becker, N Hopkins. Nature 1996
197
8

Targeted gene inactivation in zebrafish using engineered zinc-finger nucleases.
Xiangdong Meng, Marcus B Noyes, Lihua J Zhu, Nathan D Lawson, Scot A Wolfe. Nat Biotechnol 2008
530
8

The Tol2kit: a multisite gateway-based construction kit for Tol2 transposon transgenesis constructs.
Kristen M Kwan, Esther Fujimoto, Clemens Grabher, Benjamin D Mangum, Melissa E Hardy, Douglas S Campbell, John M Parant, H Joseph Yost, John P Kanki, Chi-Bin Chien. Dev Dyn 2007
8


A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity.
Martin Jinek, Krzysztof Chylinski, Ines Fonfara, Michael Hauer, Jennifer A Doudna, Emmanuelle Charpentier. Science 2012
7

Vesicular glutamate transporter 3 is required for synaptic transmission in zebrafish hair cells.
Nikolaus Obholzer, Sean Wolfson, Josef G Trapani, Weike Mo, Alex Nechiporuk, Elisabeth Busch-Nentwich, Christoph Seiler, Samuel Sidi, Christian Söllner, Robert N Duncan,[...]. J Neurosci 2008
194
7

Targeted gene disruption in somatic zebrafish cells using engineered TALENs.
Jeffry D Sander, Lindsay Cade, Cyd Khayter, Deepak Reyon, Randall T Peterson, J Keith Joung, Jing-Ruey J Yeh. Nat Biotechnol 2011
407
6

Heritable and precise zebrafish genome editing using a CRISPR-Cas system.
Woong Y Hwang, Yanfang Fu, Deepak Reyon, Morgan L Maeder, Prakriti Kaini, Jeffry D Sander, J Keith Joung, Randall T Peterson, Jing-Ruey Joanna Yeh. PLoS One 2013
238
6

RNA-guided human genome engineering via Cas9.
Prashant Mali, Luhan Yang, Kevin M Esvelt, John Aach, Marc Guell, James E DiCarlo, Julie E Norville, George M Church. Science 2013
6

Heritable gene targeting in zebrafish using customized TALENs.
Peng Huang, An Xiao, Mingguo Zhou, Zuoyan Zhu, Shuo Lin, Bo Zhang. Nat Biotechnol 2011
465
6

Efficient recovery of ENU-induced mutations from the zebrafish germline.
L Solnica-Krezel, A F Schier, W Driever. Genetics 1994
354
6

Efficient target-selected mutagenesis in zebrafish.
Erno Wienholds, Freek van Eeden, Marit Kosters, Josine Mudde, Ronald H A Plasterk, Edwin Cuppen. Genome Res 2003
306
6

Production of clones of homozygous diploid zebra fish (Brachydanio rerio).
G Streisinger, C Walker, N Dower, D Knauber, F Singer. Nature 1981
705
6

Multiplex genome engineering using CRISPR/Cas systems.
Le Cong, F Ann Ran, David Cox, Shuailiang Lin, Robert Barretto, Naomi Habib, Patrick D Hsu, Xuebing Wu, Wenyan Jiang, Luciano A Marraffini,[...]. Science 2013
6

Systematic functional analysis of the Caenorhabditis elegans genome using RNAi.
Ravi S Kamath, Andrew G Fraser, Yan Dong, Gino Poulin, Richard Durbin, Monica Gotta, Alexander Kanapin, Nathalie Le Bot, Sergio Moreno, Marc Sohrmann,[...]. Nature 2003
6

In vivo drug discovery in the zebrafish.
Leonard I Zon, Randall T Peterson. Nat Rev Drug Discov 2005
866
6

ARS2 is a conserved eukaryotic gene essential for early mammalian development.
Michael D Wilson, Diana Wang, Rebecca Wagner, Hilde Breyssens, Marina Gertsenstein, Corrinne Lobe, Xin Lu, Andras Nagy, Robert D Burke, Ben F Koop,[...]. Mol Cell Biol 2008
37
16

Ars2 links the nuclear cap-binding complex to RNA interference and cell proliferation.
Joshua J Gruber, D Steven Zatechka, Leah R Sabin, Jeongsik Yong, Julian J Lum, Mei Kong, Wei-Xing Zong, Zhenxi Zhang, Chi-Kong Lau, Jason Rawlings,[...]. Cell 2009
135
6

Ars2 promotes proper replication-dependent histone mRNA 3' end formation.
Joshua J Gruber, Scott H Olejniczak, Jeongsik Yong, Gaspare La Rocca, Gideon Dreyfuss, Craig B Thompson. Mol Cell 2012
55
10

Large-scale mutagenesis in the zebrafish: in search of genes controlling development in a vertebrate.
M C Mullins, M Hammerschmidt, P Haffter, C Nüsslein-Volhard. Curr Biol 1994
555
6

Mutations in cadherin 23 affect tip links in zebrafish sensory hair cells.
Christian Söllner, Gerd-Jörg Rauch, Jan Siemens, Robert Geisler, Stephan C Schuster, Ulrich Müller, Teresa Nicolson. Nature 2004
233
6


Fiji: an open-source platform for biological-image analysis.
Johannes Schindelin, Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig, Mark Longair, Tobias Pietzsch, Stephan Preibisch, Curtis Rueden, Stephan Saalfeld, Benjamin Schmid,[...]. Nat Methods 2012
6

Genetic compensation: A phenomenon in search of mechanisms.
Mohamed A El-Brolosy, Didier Y R Stainier. PLoS Genet 2017
283
6

Loss of ribosomal protein L11 affects zebrafish embryonic development through a p53-dependent apoptotic response.
Anirban Chakraborty, Tamayo Uechi, Sayomi Higa, Hidetsugu Torihara, Naoya Kenmochi. PLoS One 2009
99
5

ZFIN: enhancements and updates to the Zebrafish Model Organism Database.
Yvonne Bradford, Tom Conlin, Nathan Dunn, David Fashena, Ken Frazer, Douglas G Howe, Jonathan Knight, Prita Mani, Ryan Martin, Sierra A T Moxon,[...]. Nucleic Acids Res 2011
160
5


p53 activation by knockdown technologies.
Mara E Robu, Jon D Larson, Aidas Nasevicius, Soraya Beiraghi, Charles Brenner, Steven A Farber, Stephen C Ekker. PLoS Genet 2007
773
5


Ars2 maintains neural stem-cell identity through direct transcriptional activation of Sox2.
Celia Andreu-Agullo, Thomas Maurin, Craig B Thompson, Eric C Lai. Nature 2011
53
9


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.