A citation-based method for searching scientific literature

Wayne A Decatur, Maurille J Fournier. Trends Biochem Sci 2002
Times Cited: 425







List of co-cited articles
1197 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Tuning the ribosome: The influence of rRNA modification on eukaryotic ribosome biogenesis and function.
Katherine E Sloan, Ahmed S Warda, Sunny Sharma, Karl-Dieter Entian, Denis L J Lafontaine, Markus T Bohnsack. RNA Biol 2017
265
29

MODOMICS: a database of RNA modification pathways. 2017 update.
Pietro Boccaletto, Magdalena A Machnicka, Elzbieta Purta, Pawel Piatkowski, Blazej Baginski, Tomasz K Wirecki, Valérie de Crécy-Lagard, Robert Ross, Patrick A Limbach, Annika Kotter,[...]. Nucleic Acids Res 2018
869
24

Evidence for rRNA 2'-O-methylation plasticity: Control of intrinsic translational capabilities of human ribosomes.
Jenny Erales, Virginie Marchand, Baptiste Panthu, Sandra Gillot, Stéphane Belin, Sandra E Ghayad, Maxime Garcia, Florian Laforêts, Virginie Marcel, Agnès Baudin-Baillieu,[...]. Proc Natl Acad Sci U S A 2017
120
22

p53 acts as a safeguard of translational control by regulating fibrillarin and rRNA methylation in cancer.
Virginie Marcel, Sandra E Ghayad, Stéphane Belin, Gabriel Therizols, Anne-Pierre Morel, Eduardo Solano-Gonzàlez, Julie A Vendrell, Sabine Hacot, Hichem C Mertani, Marie Alexandra Albaret,[...]. Cancer Cell 2013
171
20

Site-specific ribose methylation of preribosomal RNA: a novel function for small nucleolar RNAs.
Z Kiss-László, Y Henry, J P Bachellerie, M Caizergues-Ferrer, T Kiss. Cell 1996
625
18

Profiling of 2'-O-Me in human rRNA reveals a subset of fractionally modified positions and provides evidence for ribosome heterogeneity.
Nicolai Krogh, Martin D Jansson, Sophia J Häfner, Disa Tehler, Ulf Birkedal, Mikkel Christensen-Dalsgaard, Anders H Lund, Henrik Nielsen. Nucleic Acids Res 2016
132
18


Illumina-based RiboMethSeq approach for mapping of 2'-O-Me residues in RNA.
Virginie Marchand, Florence Blanloeil-Oillo, Mark Helm, Yuri Motorin. Nucleic Acids Res 2016
116
17

Structural insights into the role of rRNA modifications in protein synthesis and ribosome assembly.
Yury S Polikanov, Sergey V Melnikov, Dieter Söll, Thomas A Steitz. Nat Struct Mol Biol 2015
132
17

'View From A Bridge': A New Perspective on Eukaryotic rRNA Base Modification.
Sunny Sharma, Denis L J Lafontaine. Trends Biochem Sci 2015
135
16


Pseudouridine profiling reveals regulated mRNA pseudouridylation in yeast and human cells.
Thomas M Carlile, Maria F Rojas-Duran, Boris Zinshteyn, Hakyung Shin, Kristen M Bartoli, Wendy V Gilbert. Nature 2014
529
15

Transcriptome-wide mapping reveals widespread dynamic-regulated pseudouridylation of ncRNA and mRNA.
Schraga Schwartz, Douglas A Bernstein, Maxwell R Mumbach, Marko Jovanovic, Rebecca H Herbst, Brian X León-Ricardo, Jesse M Engreitz, Mitchell Guttman, Rahul Satija, Eric S Lander,[...]. Cell 2014
519
15

Visualization of chemical modifications in the human 80S ribosome structure.
S Kundhavai Natchiar, Alexander G Myasnikov, Hanna Kratzat, Isabelle Hazemann, Bruno P Klaholz. Nature 2017
153
15


Identification of sites of 2'-O-methylation vulnerability in human ribosomal RNAs by systematic mapping.
Sunny Sharma, Virginie Marchand, Yuri Motorin, Denis L J Lafontaine. Sci Rep 2017
61
22

RNA nucleotide methylation.
Yuri Motorin, Mark Helm. Wiley Interdiscip Rev RNA 2011
272
13

rRNA pseudouridylation defects affect ribosomal ligand binding and translational fidelity from yeast to human cells.
Karen Jack, Cristian Bellodi, Dori M Landry, Rachel O Niederer, Arturas Meskauskas, Sharmishtha Musalgaonkar, Noam Kopmar, Olya Krasnykh, Alison M Dean, Sunnie R Thompson,[...]. Mol Cell 2011
184
13

Pseudouridine in RNA: what, where, how, and why.
M Charette, M W Gray. IUBMB Life 2000
350
13

Landscape of the complete RNA chemical modifications in the human 80S ribosome.
Masato Taoka, Yuko Nobe, Yuka Yamaki, Ko Sato, Hideaki Ishikawa, Keiichi Izumikawa, Yoshio Yamauchi, Kouji Hirota, Hiroshi Nakayama, Nobuhiro Takahashi,[...]. Nucleic Acids Res 2018
116
13

Dysregulation of ribosome biogenesis and translational capacity is associated with tumor progression of human breast cancer cells.
Stéphane Belin, Anne Beghin, Eduardo Solano-Gonzàlez, Laurent Bezin, Stéphanie Brunet-Manquat, Julien Textoris, Anne-Catherine Prats, Hichem C Mertani, Charles Dumontet, Jean-Jacques Diaz. PLoS One 2009
153
12

Dynamic RNA Modifications in Gene Expression Regulation.
Ian A Roundtree, Molly E Evans, Tao Pan, Chuan He. Cell 2017
12


Nucleotide modifications in three functionally important regions of the Saccharomyces cerevisiae ribosome affect translation accuracy.
Agnès Baudin-Baillieu, Céline Fabret, Xue-Hai Liang, Dorota Piekna-Przybylska, Maurille J Fournier, Jean-Pierre Rousset. Nucleic Acids Res 2009
93
12


Chemical pulldown reveals dynamic pseudouridylation of the mammalian transcriptome.
Xiaoyu Li, Ping Zhu, Shiqing Ma, Jinghui Song, Jinyi Bai, Fangfang Sun, Chengqi Yi. Nat Chem Biol 2015
269
11

Profiling of ribose methylations in RNA by high-throughput sequencing.
Ulf Birkedal, Mikkel Christensen-Dalsgaard, Nicolai Krogh, Radhakrishnan Sabarinathan, Jan Gorodkin, Henrik Nielsen. Angew Chem Int Ed Engl 2015
133
11

2'-O-Methylation of Ribosomal RNA: Towards an Epitranscriptomic Control of Translation?
Piero Lo Monaco, Virginie Marcel, Jean-Jacques Diaz, Frédéric Catez. Biomolecules 2018
54
20

Topology of the human and mouse m6A RNA methylomes revealed by m6A-seq.
Dan Dominissini, Sharon Moshitch-Moshkovitz, Schraga Schwartz, Mali Salmon-Divon, Lior Ungar, Sivan Osenberg, Karen Cesarkas, Jasmine Jacob-Hirsch, Ninette Amariglio, Martin Kupiec,[...]. Nature 2012
11

MODOMICS: a database of RNA modification pathways--2013 update.
Magdalena A Machnicka, Kaja Milanowska, Okan Osman Oglou, Elzbieta Purta, Malgorzata Kurkowska, Anna Olchowik, Witold Januszewski, Sebastian Kalinowski, Stanislaw Dunin-Horkawicz, Kristian M Rother,[...]. Nucleic Acids Res 2013
713
10

The dynamic N(1)-methyladenosine methylome in eukaryotic messenger RNA.
Dan Dominissini, Sigrid Nachtergaele, Sharon Moshitch-Moshkovitz, Eyal Peer, Nitzan Kol, Moshe Shay Ben-Haim, Qing Dai, Ayelet Di Segni, Mali Salmon-Divon, Wesley C Clark,[...]. Nature 2016
464
10




Impaired control of IRES-mediated translation in X-linked dyskeratosis congenita.
Andrew Yoon, Guang Peng, Yves Brandenburger, Ornella Zollo, Wei Xu, Eduardo Rego, Davide Ruggero. Science 2006
301
9

What do we know about ribosomal RNA methylation in Escherichia coli?
O V Sergeeva, A A Bogdanov, P V Sergiev. Biochimie 2015
39
23

The complete chemical structure of Saccharomyces cerevisiae rRNA: partial pseudouridylation of U2345 in 25S rRNA by snoRNA snR9.
Masato Taoka, Yuko Nobe, Yuka Yamaki, Yoshio Yamauchi, Hideaki Ishikawa, Nobuhiro Takahashi, Hiroshi Nakayama, Toshiaki Isobe. Nucleic Acids Res 2016
58
15

Structural and evolutionary insights into ribosomal RNA methylation.
Petr V Sergiev, Nikolay A Aleksashin, Anastasia A Chugunova, Yury S Polikanov, Olga A Dontsova. Nat Chem Biol 2018
74
12

The RNA Modification Database, RNAMDB: 2011 update.
William A Cantara, Pamela F Crain, Jef Rozenski, James A McCloskey, Kimberly A Harris, Xiaonong Zhang, Franck A P Vendeix, Daniele Fabris, Paul F Agris. Nucleic Acids Res 2011
551
8


Heterogeneous Ribosomes Preferentially Translate Distinct Subpools of mRNAs Genome-wide.
Zhen Shi, Kotaro Fujii, Kyle M Kovary, Naomi R Genuth, Hannes L Röst, Mary N Teruel, Maria Barna. Mol Cell 2017
279
8

Structure of the human 80S ribosome.
Heena Khatter, Alexander G Myasnikov, S Kundhavai Natchiar, Bruno P Klaholz. Nature 2015
254
8

High-throughput single-base resolution mapping of RNA 2΄-O-methylated residues.
Danny Incarnato, Francesca Anselmi, Edoardo Morandi, Francesco Neri, Mara Maldotti, Stefania Rapelli, Caterina Parlato, Giulia Basile, Salvatore Oliviero. Nucleic Acids Res 2017
65
12

snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs.
Laurent Lestrade, Michel J Weber. Nucleic Acids Res 2006
353
8

High-resolution structure of the Escherichia coli ribosome.
Jonas Noeske, Michael R Wasserman, Daniel S Terry, Roger B Altman, Scott C Blanchard, Jamie H D Cate. Nat Struct Mol Biol 2015
145
8


Specialized box C/D snoRNPs act as antisense guides to target RNA base acetylation.
Sunny Sharma, Jun Yang, Rob van Nues, Peter Watzinger, Peter Kötter, Denis L J Lafontaine, Sander Granneman, Karl-Dieter Entian. PLoS Genet 2017
51
15


NSUN4 is a dual function mitochondrial protein required for both methylation of 12S rRNA and coordination of mitoribosomal assembly.
Metodi Dimitrov Metodiev, Henrik Spåhr, Paola Loguercio Polosa, Caroline Meharg, Christian Becker, Janine Altmueller, Bianca Habermann, Nils-Göran Larsson, Benedetta Ruzzenente. PLoS Genet 2014
159
8

5-methylcytosine promotes mRNA export - NSUN2 as the methyltransferase and ALYREF as an m5C reader.
Xin Yang, Ying Yang, Bao-Fa Sun, Yu-Sheng Chen, Jia-Wei Xu, Wei-Yi Lai, Ang Li, Xing Wang, Devi Prasad Bhattarai, Wen Xiao,[...]. Cell Res 2017
330
8


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.