A citation-based method for searching scientific literature

Paola Grandi, Vladimir Rybin, Jochen Bassler, Elisabeth Petfalski, Daniela Strauss, Martina Marzioch, Thorsten Schäfer, Bernhard Kuster, Herbert Tschochner, David Tollervey, Anne Claude Gavin, Ed Hurt. Mol Cell 2002
Times Cited: 367







List of co-cited articles
1047 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


A large nucleolar U3 ribonucleoprotein required for 18S ribosomal RNA biogenesis.
François Dragon, Jennifer E G Gallagher, Patricia A Compagnone-Post, Brianna M Mitchell, Kara A Porwancher, Karen A Wehner, Steven Wormsley, Robert E Settlage, Jeffrey Shabanowitz, Yvonne Osheim,[...]. Nature 2002
517
63

Ribosome biogenesis in the yeast Saccharomyces cerevisiae.
John L Woolford, Susan J Baserga. Genetics 2013
431
57

Architecture of the 90S Pre-ribosome: A Structural View on the Birth of the Eukaryotic Ribosome.
Markus Kornprobst, Martin Turk, Nikola Kellner, Jingdong Cheng, Dirk Flemming, Isabelle Koš-Braun, Martin Koš, Matthias Thoms, Otto Berninghausen, Roland Beckmann,[...]. Cell 2016
115
50

Stepwise and dynamic assembly of the earliest precursors of small ribosomal subunits in yeast.
Liman Zhang, Chen Wu, Gaihong Cai, She Chen, Keqiong Ye. Genes Dev 2016
68
60

Stage-specific assembly events of the 6-MDa small-subunit processome initiate eukaryotic ribosome biogenesis.
Malik Chaker-Margot, Mirjam Hunziker, Jonas Barandun, Brian D Dill, Sebastian Klinge. Nat Struct Mol Biol 2015
68
58

Architecture of the yeast small subunit processome.
Malik Chaker-Margot, Jonas Barandun, Mirjam Hunziker, Sebastian Klinge. Science 2017
80
48

Molecular architecture of the 90S small subunit pre-ribosome.
Qi Sun, Xing Zhu, Jia Qi, Weidong An, Pengfei Lan, Dan Tan, Rongchang Chen, Bing Wang, Sanduo Zheng, Cheng Zhang,[...]. Elife 2017
85
43

The path from nucleolar 90S to cytoplasmic 40S pre-ribosomes.
Thorsten Schäfer, Daniela Strauss, Elisabeth Petfalski, David Tollervey, Ed Hurt. EMBO J 2003
238
32

The structure of the eukaryotic ribosome at 3.0 Å resolution.
Adam Ben-Shem, Nicolas Garreau de Loubresse, Sergey Melnikov, Lasse Jenner, Gulnara Yusupova, Marat Yusupov. Science 2011
718
30

The 90S preribosome is a multimodular structure that is assembled through a hierarchical mechanism.
Jorge Pérez-Fernández, Angel Román, Javier De Las Rivas, Xosé R Bustelo, Mercedes Dosil. Mol Cell Biol 2007
123
29

The Exosome Is Recruited to RNA Substrates through Specific Adaptor Proteins.
Matthias Thoms, Emma Thomson, Jochen Baßler, Marén Gnädig, Sabine Griesel, Ed Hurt. Cell 2015
112
28

Pre-18S ribosomal RNA is structurally compacted into the SSU processome prior to being cleaved from nascent transcripts in Saccharomyces cerevisiae.
Yvonne N Osheim, Sarah L French, Kristin M Keck, Erica A Champion, Krasimir Spasov, François Dragon, Susan J Baserga, Ann L Beyer. Mol Cell 2004
194
27

The post-transcriptional steps of eukaryotic ribosome biogenesis.
A K Henras, J Soudet, M Gérus, S Lebaron, M Caizergues-Ferrer, A Mougin, Y Henry. Cell Mol Life Sci 2008
408
27

High-definition macromolecular composition of yeast RNA-processing complexes.
Nevan J Krogan, Wen-Tao Peng, Gerard Cagney, Mark D Robinson, Robin Haw, Gouqing Zhong, Xinghua Guo, Xin Zhang, Veronica Canadien, Dawn P Richards,[...]. Mol Cell 2004
292
26


Functions of ribosomal proteins in assembly of eukaryotic ribosomes in vivo.
Jesus de la Cruz, Katrin Karbstein, John L Woolford. Annu Rev Biochem 2015
175
24

The complete structure of the small-subunit processome.
Jonas Barandun, Malik Chaker-Margot, Mirjam Hunziker, Kelly R Molloy, Brian T Chait, Sebastian Klinge. Nat Struct Mol Biol 2017
69
34

Driving ribosome assembly.
Dieter Kressler, Ed Hurt, Jochen Bassler. Biochim Biophys Acta 2010
332
23

An overview of pre-ribosomal RNA processing in eukaryotes.
Anthony K Henras, Célia Plisson-Chastang, Marie-Françoise O'Donohue, Anirban Chakraborty, Pierre-Emmanuel Gleizes. Wiley Interdiscip Rev RNA 2015
290
23

3.2-Å-resolution structure of the 90S preribosome before A1 pre-rRNA cleavage.
Jingdong Cheng, Nikola Kellner, Otto Berninghausen, Ed Hurt, Roland Beckmann. Nat Struct Mol Biol 2017
58
39


Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae.
M S Longtine, A McKenzie, D J Demarini, N G Shah, A Wach, A Brachat, P Philippsen, J R Pringle. Yeast 1998
22

Elucidation of the assembly events required for the recruitment of Utp20, Imp4 and Bms1 onto nascent pre-ribosomes.
Jorge Pérez-Fernández, Pilar Martín-Marcos, Mercedes Dosil. Nucleic Acids Res 2011
42
52

Diverse roles of assembly factors revealed by structures of late nuclear pre-60S ribosomes.
Shan Wu, Beril Tutuncuoglu, Kaige Yan, Hailey Brown, Yixiao Zhang, Dan Tan, Michael Gamalinda, Yi Yuan, Zhifei Li, Jelena Jakovljevic,[...]. Nature 2016
112
22


A second base pair interaction between U3 small nucleolar RNA and the 5'-ETS region is required for early cleavage of the yeast pre-ribosomal RNA.
Nathalie Marmier-Gourrier, Antoine Cléry, Florence Schlotter, Véronique Senty-Ségault, Christiane Branlant. Nucleic Acids Res 2011
43
48

RNA polymerase I transcription and pre-rRNA processing are linked by specific SSU processome components.
Jennifer E G Gallagher, David A Dunbar, Sander Granneman, Brianna M Mitchell, Yvonne Osheim, Ann L Beyer, Susan J Baserga. Genes Dev 2004
176
21

Ribosome assembly coming into focus.
Sebastian Klinge, John L Woolford. Nat Rev Mol Cell Biol 2019
137
20

The economics of ribosome biosynthesis in yeast.
J R Warner. Trends Biochem Sci 1999
19

60S ribosome biogenesis requires rotation of the 5S ribonucleoprotein particle.
Christoph Leidig, Matthias Thoms, Iris Holdermann, Bettina Bradatsch, Otto Berninghausen, Gert Bange, Irmgard Sinning, Ed Hurt, Roland Beckmann. Nat Commun 2014
89
21

The small subunit processome in ribosome biogenesis—progress and prospects.
Kathleen R Phipps, J Michael Charette, Susan J Baserga. Wiley Interdiscip Rev RNA 2011
122
19

Processing of preribosomal RNA in Saccharomyces cerevisiae.
Antonio Fernández-Pevida, Dieter Kressler, Jesús de la Cruz. Wiley Interdiscip Rev RNA 2015
57
33

UtpA and UtpB chaperone nascent pre-ribosomal RNA and U3 snoRNA to initiate eukaryotic ribosome assembly.
Mirjam Hunziker, Jonas Barandun, Elisabeth Petfalski, Dongyan Tan, Clémentine Delan-Forino, Kelly R Molloy, Kelly H Kim, Hywel Dunn-Davies, Yi Shi, Malik Chaker-Margot,[...]. Nat Commun 2016
35
54

Insertion of the Biogenesis Factor Rei1 Probes the Ribosomal Tunnel during 60S Maturation.
Basil Johannes Greber, Stefan Gerhardy, Alexander Leitner, Marc Leibundgut, Michèle Salem, Daniel Boehringer, Nicolas Leulliot, Ruedi Aebersold, Vikram Govind Panse, Nenad Ban. Cell 2016
64
29

A new system for naming ribosomal proteins.
Nenad Ban, Roland Beckmann, Jamie H D Cate, Jonathan D Dinman, François Dragon, Steven R Ellis, Denis L J Lafontaine, Lasse Lindahl, Anders Liljas, Jeffrey M Lipton,[...]. Curr Opin Struct Biol 2014
322
18

Stepwise assembly of the earliest precursors of large ribosomal subunits in yeast.
Wu Chen, Zhensheng Xie, Fuquan Yang, Keqiong Ye. Nucleic Acids Res 2017
32
56

UCSF Chimera--a visualization system for exploratory research and analysis.
Eric F Pettersen, Thomas D Goddard, Conrad C Huang, Gregory S Couch, Daniel M Greenblatt, Elaine C Meng, Thomas E Ferrin. J Comput Chem 2004
17

Ribosome assembly factors prevent premature translation initiation by 40S assembly intermediates.
Bethany S Strunk, Cherisse R Loucks, Min Su, Harish Vashisth, Shanshan Cheng, Justin Schilling, Charles L Brooks, Katrin Karbstein, Georgios Skiniotis. Science 2011
154
17

PHENIX: a comprehensive Python-based system for macromolecular structure solution.
Paul D Adams, Pavel V Afonine, Gábor Bunkóczi, Vincent B Chen, Ian W Davis, Nathaniel Echols, Jeffrey J Headd, Li-Wei Hung, Gary J Kapral, Ralf W Grosse-Kunstleve,[...]. Acta Crystallogr D Biol Crystallogr 2010
17


The complexity of human ribosome biogenesis revealed by systematic nucleolar screening of Pre-rRNA processing factors.
Lionel Tafforeau, Christiane Zorbas, Jean-Louis Langhendries, Sahra-Taylor Mullineux, Vassiliki Stamatopoulou, Romain Mullier, Ludivine Wacheul, Denis L J Lafontaine. Mol Cell 2013
251
16

Structure of the pre-60S ribosomal subunit with nuclear export factor Arx1 bound at the exit tunnel.
Bettina Bradatsch, Christoph Leidig, Sander Granneman, Marén Gnädig, David Tollervey, Bettina Böttcher, Roland Beckmann, Ed Hurt. Nat Struct Mol Biol 2012
85
18

Coupled GTPase and remodelling ATPase activities form a checkpoint for ribosome export.
Yoshitaka Matsuo, Sander Granneman, Matthias Thoms, Rizos-Georgios Manikas, David Tollervey, Ed Hurt. Nature 2014
90
17

The DEAH-box helicase Dhr1 dissociates U3 from the pre-rRNA to promote formation of the central pseudoknot.
Richa Sardana, Xin Liu, Sander Granneman, Jieyi Zhu, Michael Gill, Ophelia Papoulas, Edward M Marcotte, David Tollervey, Carl C Correll, Arlen W Johnson. PLoS Biol 2015
44
36

Mechanism of eIF6 release from the nascent 60S ribosomal subunit.
Félix Weis, Emmanuel Giudice, Mark Churcher, Li Jin, Christine Hilcenko, Chi C Wong, David Traynor, Robert R Kay, Alan J Warren. Nat Struct Mol Biol 2015
105
16

Architecture of the Rix1-Rea1 checkpoint machinery during pre-60S-ribosome remodeling.
Clara Barrio-Garcia, Matthias Thoms, Dirk Flemming, Lukas Kater, Otto Berninghausen, Jochen Baßler, Roland Beckmann, Ed Hurt. Nat Struct Mol Biol 2016
66
24

The PIN domain endonuclease Utp24 cleaves pre-ribosomal RNA at two coupled sites in yeast and humans.
Graeme R Wells, Franziska Weichmann, David Colvin, Katherine E Sloan, Grzegorz Kudla, David Tollervey, Nicholas J Watkins, Claudia Schneider. Nucleic Acids Res 2016
35
45

Hrr25-dependent phosphorylation state regulates organization of the pre-40S subunit.
Thorsten Schäfer, Bohumil Maco, Elisabeth Petfalski, David Tollervey, Bettina Böttcher, Ueli Aebi, Ed Hurt. Nature 2006
161
15

A hierarchical model for assembly of eukaryotic 60S ribosomal subunit domains.
Michael Gamalinda, Uli Ohmayer, Jelena Jakovljevic, Beril Kumcuoglu, Joshua Woolford, Bertrade Mbom, Lawrence Lin, John L Woolford. Genes Dev 2014
77
19



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.