A citation-based method for searching scientific literature


List of co-cited articles
371 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


DNA methylation and its basic function.
Lisa D Moore, Thuc Le, Guoping Fan. Neuropsychopharmacology 2013
864
10

DNA methylation landscapes: provocative insights from epigenomics.
Miho M Suzuki, Adrian Bird. Nat Rev Genet 2008
10

Regulation of chromatin by histone modifications.
Andrew J Bannister, Tony Kouzarides. Cell Res 2011
9



Fast gapped-read alignment with Bowtie 2.
Ben Langmead, Steven L Salzberg. Nat Methods 2012
8

Trimmomatic: a flexible trimmer for Illumina sequence data.
Anthony M Bolger, Marc Lohse, Bjoern Usadel. Bioinformatics 2014
6

The diverse roles of DNA methylation in mammalian development and disease.
Maxim V C Greenberg, Deborah Bourc'his. Nat Rev Mol Cell Biol 2019
318
6

Global cancer statistics 2018: GLOBOCAN estimates of incidence and mortality worldwide for 36 cancers in 185 countries.
Freddie Bray, Jacques Ferlay, Isabelle Soerjomataram, Rebecca L Siegel, Lindsey A Torre, Ahmedin Jemal. CA Cancer J Clin 2018
6

Epigenetics and gene expression.
E R Gibney, C M Nolan. Heredity (Edinb) 2010
257
5

Genome-wide methylation profiles reveal quantitative views of human aging rates.
Gregory Hannum, Justin Guinney, Ling Zhao, Li Zhang, Guy Hughes, SriniVas Sadda, Brandy Klotzle, Marina Bibikova, Jian-Bing Fan, Yuan Gao,[...]. Mol Cell 2013
5

TETonic shift: biological roles of TET proteins in DNA demethylation and transcription.
William A Pastor, L Aravind, Anjana Rao. Nat Rev Mol Cell Biol 2013
513
5

Human DNA methylomes at base resolution show widespread epigenomic differences.
Ryan Lister, Mattia Pelizzola, Robert H Dowen, R David Hawkins, Gary Hon, Julian Tonti-Filippini, Joseph R Nery, Leonard Lee, Zhen Ye, Que-Minh Ngo,[...]. Nature 2009
5


Epigenetic reprogramming in mammalian development.
W Reik, W Dean, J Walter. Science 2001
4

HISAT: a fast spliced aligner with low memory requirements.
Daehwan Kim, Ben Langmead, Steven L Salzberg. Nat Methods 2015
4

Bis-SNP: combined DNA methylation and SNP calling for Bisulfite-seq data.
Yaping Liu, Kimberly D Siegmund, Peter W Laird, Benjamin P Berman. Genome Biol 2012
141
4

Global epigenomic reconfiguration during mammalian brain development.
Ryan Lister, Eran A Mukamel, Joseph R Nery, Mark Urich, Clare A Puddifoot, Nicholas D Johnson, Jacinta Lucero, Yun Huang, Andrew J Dwork, Matthew D Schultz,[...]. Science 2013
4

The Roles of Human DNA Methyltransferases and Their Isoforms in Shaping the Epigenome.
Hemant Gujar, Daniel J Weisenberger, Gangning Liang. Genes (Basel) 2019
49
8


Translating the histone code.
T Jenuwein, C D Allis. Science 2001
4

Epigenetic modifications and human disease.
Anna Portela, Manel Esteller. Nat Biotechnol 2010
4

Perceptions of epigenetics.
Adrian Bird. Nature 2007
4



The epigenotype. 1942.
C H Waddington. Int J Epidemiol 2012
331
4

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2.
Michael I Love, Wolfgang Huber, Simon Anders. Genome Biol 2014
4

The GENCODE v7 catalog of human long noncoding RNAs: analysis of their gene structure, evolution, and expression.
Thomas Derrien, Rory Johnson, Giovanni Bussotti, Andrea Tanzer, Sarah Djebali, Hagen Tilgner, Gregory Guernec, David Martin, Angelika Merkel, David G Knowles,[...]. Genome Res 2012
4

Molecular mechanisms of long noncoding RNAs.
Kevin C Wang, Howard Y Chang. Mol Cell 2011
3

Inhibiting DNA Methylation by 5-Aza-2'-deoxycytidine ameliorates atherosclerosis through suppressing macrophage inflammation.
Qiang Cao, Xianfeng Wang, Lin Jia, Ashis K Mondal, Abdoulaye Diallo, Gregory A Hawkins, Swapan K Das, John S Parks, Liqing Yu, Huidong Shi,[...]. Endocrinology 2014
85
3

What do you mean, "epigenetic"?
Carrie Deans, Keith A Maggert. Genetics 2015
141
3

Epigenetic prediction of complex traits and death.
Daniel L McCartney, Robert F Hillary, Anna J Stevenson, Stuart J Ritchie, Rosie M Walker, Qian Zhang, Stewart W Morris, Mairead L Bermingham, Archie Campbell, Alison D Murray,[...]. Genome Biol 2018
35
8

Integrative analysis of 111 reference human epigenomes.
Anshul Kundaje, Wouter Meuleman, Jason Ernst, Misha Bilenky, Angela Yen, Alireza Heravi-Moussavi, Pouya Kheradpour, Zhizhuo Zhang, Jianrong Wang, Michael J Ziller,[...]. Nature 2015
3

Decoding the epigenetic language of neuronal plasticity.
Emiliana Borrelli, Eric J Nestler, C David Allis, Paolo Sassone-Corsi. Neuron 2008
331
3

Epigenetic programming by maternal behavior.
Ian C G Weaver, Nadia Cervoni, Frances A Champagne, Ana C D'Alessio, Shakti Sharma, Jonathan R Seckl, Sergiy Dymov, Moshe Szyf, Michael J Meaney. Nat Neurosci 2004
3

Sustained hippocampal chromatin regulation in a mouse model of depression and antidepressant action.
Nadia M Tsankova, Olivier Berton, William Renthal, Arvind Kumar, Rachel L Neve, Eric J Nestler. Nat Neurosci 2006
3

Non-coding RNAs: regulators of disease.
Ryan J Taft, Ken C Pang, Timothy R Mercer, Marcel Dinger, John S Mattick. J Pathol 2010
682
3

MeCP2, a key contributor to neurological disease, activates and represses transcription.
Maria Chahrour, Sung Yun Jung, Chad Shaw, Xiaobo Zhou, Stephen T C Wong, Jun Qin, Huda Y Zoghbi. Science 2008
3

An epigenetic biomarker of aging for lifespan and healthspan.
Morgan E Levine, Ake T Lu, Austin Quach, Brian H Chen, Themistocles L Assimes, Stefania Bandinelli, Lifang Hou, Andrea A Baccarelli, James D Stewart, Yun Li,[...]. Aging (Albany NY) 2018
370
3

Persistent epigenetic differences associated with prenatal exposure to famine in humans.
Bastiaan T Heijmans, Elmar W Tobi, Aryeh D Stein, Hein Putter, Gerard J Blauw, Ezra S Susser, P Eline Slagboom, L H Lumey. Proc Natl Acad Sci U S A 2008
3


Epigenetic measures of ageing predict the prevalence and incidence of leading causes of death and disease burden.
Robert F Hillary, Anna J Stevenson, Daniel L McCartney, Archie Campbell, Rosie M Walker, David M Howard, Craig W Ritchie, Steve Horvath, Caroline Hayward, Andrew M McIntosh,[...]. Clin Epigenetics 2020
13
23

DNA methylation GrimAge strongly predicts lifespan and healthspan.
Ake T Lu, Austin Quach, James G Wilson, Alex P Reiner, Abraham Aviv, Kenneth Raj, Lifang Hou, Andrea A Baccarelli, Yun Li, James D Stewart,[...]. Aging (Albany NY) 2019
201
3

An operational definition of epigenetics.
Shelley L Berger, Tony Kouzarides, Ramin Shiekhattar, Ali Shilatifard. Genes Dev 2009
884
3

Lateral Thinking: How Histone Modifications Regulate Gene Expression.
Moyra Lawrence, Sylvain Daujat, Robert Schneider. Trends Genet 2016
280
3


The role of mutations in epigenetic regulators in myeloid malignancies.
Alan H Shih, Omar Abdel-Wahab, Jay P Patel, Ross L Levine. Nat Rev Cancer 2012
485
3

Somatic mutations altering EZH2 (Tyr641) in follicular and diffuse large B-cell lymphomas of germinal-center origin.
Ryan D Morin, Nathalie A Johnson, Tesa M Severson, Andrew J Mungall, Jianghong An, Rodrigo Goya, Jessica E Paul, Merrill Boyle, Bruce W Woolcock, Florian Kuchenbauer,[...]. Nat Genet 2010
3

Epigenetics: a landscape takes shape.
Aaron D Goldberg, C David Allis, Emily Bernstein. Cell 2007
3

The hallmarks of aging.
Carlos López-Otín, Maria A Blasco, Linda Partridge, Manuel Serrano, Guido Kroemer. Cell 2013
3


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.