A citation-based method for searching scientific literature

Andrey S Krasilnikov, Xiaojing Yang, Tao Pan, Alfonso Mondragón. Nature 2003
Times Cited: 173







List of co-cited articles
1096 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Basis for structural diversity in homologous RNAs.
Andrey S Krasilnikov, Yinghua Xiao, Tao Pan, Alfonso Mondragón. Science 2004
104
39

Crystal structure of the RNA component of bacterial ribonuclease P.
Alfredo Torres-Larios, Kerren K Swinger, Andrey S Krasilnikov, Tao Pan, Alfonso Mondragón. Nature 2005
158
36

Crystal structure of a bacterial ribonuclease P RNA.
Alexei V Kazantsev, Angelika A Krivenko, Daniel J Harrington, Stephen R Holbrook, Paul D Adams, Norman R Pace. Proc Natl Acad Sci U S A 2005
156
34

The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme.
C Guerrier-Takada, K Gardiner, T Marsh, N Pace, S Altman. Cell 1983
34

Crystal structure of a group I ribozyme domain: principles of RNA packing.
J H Cate, A R Gooding, E Podell, K Zhou, B L Golden, C E Kundrot, T R Cech, J A Doudna. Science 1996
29

Structure of a bacterial ribonuclease P holoenzyme in complex with tRNA.
Nicholas J Reiter, Amy Osterman, Alfredo Torres-Larios, Kerren K Swinger, Tao Pan, Alfonso Mondragón. Nature 2010
191
26

Structure of ribonuclease P--a universal ribozyme.
Alfredo Torres-Larios, Kerren K Swinger, Tao Pan, Alfonso Mondragón. Curr Opin Struct Biol 2006
56
37

Bacterial RNase P: a new view of an ancient enzyme.
Alexei V Kazantsev, Norman R Pace. Nat Rev Microbiol 2006
136
20

The complete atomic structure of the large ribosomal subunit at 2.4 A resolution.
N Ban, P Nissen, J Hansen, P B Moore, T A Steitz. Science 2000
18

Ribonuclease P: the evolution of an ancient RNA enzyme.
Scott C Walker, David R Engelke. Crit Rev Biochem Mol Biol 2006
139
18

RNA tertiary interactions in the large ribosomal subunit: the A-minor motif.
P Nissen, J A Ippolito, N Ban, P B Moore, T A Steitz. Proc Natl Acad Sci U S A 2001
497
17

RNase P RNAs from some Archaea are catalytically active.
J A Pannucci, E S Haas, T A Hall, J K Harris, J W Brown. Proc Natl Acad Sci U S A 1999
179
17

Eukaryotic RNase P RNA mediates cleavage in the absence of protein.
Ema Kikovska, Staffan G Svärd, Leif A Kirsebom. Proc Natl Acad Sci U S A 2007
125
17

Crystal structure of a self-spliced group II intron.
Navtej Toor, Kevin S Keating, Sean D Taylor, Anna Marie Pyle. Science 2008
339
16


Ribonuclease P protein structure: evolutionary origins in the translational apparatus.
T Stams, S Niranjanakumari, C A Fierke, D W Christianson. Science 1998
129
15

RNA structure analysis at single nucleotide resolution by selective 2'-hydroxyl acylation and primer extension (SHAPE).
Edward J Merino, Kevin A Wilkinson, Jennifer L Coughlan, Kevin M Weeks. J Am Chem Soc 2005
526
15


Of proteins and RNA: the RNase P/MRP family.
Olga Esakova, Andrey S Krasilnikov. RNA 2010
155
14


Identification and analysis of ribonuclease P and MRP RNA in a broad range of eukaryotes.
Paul Piccinelli, Magnus Alm Rosenblad, Tore Samuelsson. Nucleic Acids Res 2005
90
14

Crystal structure of a self-splicing group I intron with both exons.
Peter L Adams, Mary R Stahley, Anne B Kosek, Jimin Wang, Scott A Strobel. Nature 2004
321
13

RNase P: interface of the RNA and protein worlds.
Donald Evans, Steven M Marquez, Norman R Pace. Trends Biochem Sci 2006
151
12



The kink-turn: a new RNA secondary structure motif.
D J Klein, T M Schmeing, P B Moore, T A Steitz. EMBO J 2001
576
12

Accurate SHAPE-directed RNA structure determination.
Katherine E Deigan, Tian W Li, David H Mathews, Kevin M Weeks. Proc Natl Acad Sci U S A 2009
452
12

The P4 metal binding site in RNase P RNA affects active site metal affinity through substrate positioning.
Eric L Christian, Kari M J Smith, Nicholas Perera, Michael E Harris. RNA 2006
36
33

The Ribonuclease P Database.
J W Brown. Nucleic Acids Res 1999
238
12

Structural perspective on the activation of RNAse P RNA by protein.
Amy H Buck, Alexei V Kazantsev, Andrew B Dalby, Norman R Pace. Nat Struct Mol Biol 2005
58
20

Protein activation of a ribozyme: the role of bacterial RNase P protein.
Amy H Buck, Andrew B Dalby, Alexander W Poole, Alexei V Kazantsev, Norman R Pace. EMBO J 2005
73
16

Structure of the 30S ribosomal subunit.
B T Wimberly, D E Brodersen, W M Clemons, R J Morgan-Warren, A P Carter, C Vonrhein, T Hartsch, V Ramakrishnan. Nature 2000
11





On the occurrence of the T-loop RNA folding motif in large RNA molecules.
Andrey S Krasilnikov, Alfonso Mondragón. RNA 2003
64
17

Eukaryotic ribonucleases P/MRP: the crystal structure of the P3 domain.
Anna Perederina, Olga Esakova, Chao Quan, Elena Khanova, Andrey S Krasilnikov. EMBO J 2010
42
26


Protein component of the ribozyme ribonuclease P alters substrate recognition by directly contacting precursor tRNA.
S Niranjanakumari, T Stams, S M Crary, D W Christianson, C A Fierke. Proc Natl Acad Sci U S A 1998
140
10



Three-dimensional structure of a hammerhead ribozyme.
H W Pley, K M Flaherty, D B McKay. Nature 1994
843
10

High-resolution structure of RNase P protein from Thermotoga maritima.
Alexei V Kazantsev, Angelika A Krivenko, Daniel J Harrington, Richard J Carter, Stephen R Holbrook, Paul D Adams, Norman R Pace. Proc Natl Acad Sci U S A 2003
68
14


RNA tertiary structure mediation by adenosine platforms.
J H Cate, A R Gooding, E Podell, K Zhou, B L Golden, A A Szewczak, C E Kundrot, T R Cech, J A Doudna. Science 1996
264
10

Footprinting analysis demonstrates extensive similarity between eukaryotic RNase P and RNase MRP holoenzymes.
Olga Esakova, Anna Perederina, Chao Quan, Mark E Schmitt, Andrey S Krasilnikov. RNA 2008
26
38

Mapping metal-binding sites in the catalytic domain of bacterial RNase P RNA.
Alexei V Kazantsev, Angelika A Krivenko, Norman R Pace. RNA 2009
37
27

A universal mode of helix packing in RNA.
E A Doherty, R T Batey, B Masquida, J A Doudna. Nat Struct Biol 2001
196
9

How RNA folds.
I Tinoco, C Bustamante. J Mol Biol 1999
579
9


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.