A citation-based method for searching scientific literature

Christoph Stosiek, Olga Garaschuk, Knut Holthoff, Arthur Konnerth. Proc Natl Acad Sci U S A 2003
Times Cited: 806







List of co-cited articles
722 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Ultrasensitive fluorescent proteins for imaging neuronal activity.
Tsai-Wen Chen, Trevor J Wardill, Yi Sun, Stefan R Pulver, Sabine L Renninger, Amy Baohan, Eric R Schreiter, Rex A Kerr, Michael B Orger, Vivek Jayaraman,[...]. Nature 2013
29

Deep tissue two-photon microscopy.
Fritjof Helmchen, Winfried Denk. Nat Methods 2005
17

Imaging calcium in neurons.
Christine Grienberger, Arthur Konnerth. Neuron 2012
565
15

Two-photon laser scanning fluorescence microscopy.
W Denk, J H Strickler, W W Webb. Science 1990
15

Simultaneous Denoising, Deconvolution, and Demixing of Calcium Imaging Data.
Eftychios A Pnevmatikakis, Daniel Soudry, Yuanjun Gao, Timothy A Machado, Josh Merel, David Pfau, Thomas Reardon, Yu Mu, Clay Lacefield, Weijian Yang,[...]. Neuron 2016
306
13

High-speed in vivo calcium imaging reveals neuronal network activity with near-millisecond precision.
Benjamin F Grewe, Dominik Langer, Hansjörg Kasper, Björn M Kampa, Fritjof Helmchen. Nat Methods 2010
268
12

Functional imaging with cellular resolution reveals precise micro-architecture in visual cortex.
Kenichi Ohki, Sooyoung Chung, Yeang H Ch'ng, Prakash Kara, R Clay Reid. Nature 2005
702
10

In vivo three-photon microscopy of subcortical structures within an intact mouse brain.
Nicholas G Horton, Ke Wang, Demirhan Kobat, Catharine G Clark, Frank W Wise, Chris B Schaffer, Chris Xu. Nat Photonics 2013
484
10

Millisecond-timescale, genetically targeted optical control of neural activity.
Edward S Boyden, Feng Zhang, Ernst Bamberg, Georg Nagel, Karl Deisseroth. Nat Neurosci 2005
10

Sensitive red protein calcium indicators for imaging neural activity.
Hod Dana, Boaz Mohar, Yi Sun, Sujatha Narayan, Andrew Gordus, Jeremy P Hasseman, Getahun Tsegaye, Graham T Holt, Amy Hu, Deepika Walpita,[...]. Elife 2016
359
10

High-performance calcium sensors for imaging activity in neuronal populations and microcompartments.
Hod Dana, Yi Sun, Boaz Mohar, Brad K Hulse, Aaron M Kerlin, Jeremy P Hasseman, Getahun Tsegaye, Arthur Tsang, Allan Wong, Ronak Patel,[...]. Nat Methods 2019
192
10

Fully integrated silicon probes for high-density recording of neural activity.
James J Jun, Nicholas A Steinmetz, Joshua H Siegle, Daniel J Denman, Marius Bauza, Brian Barbarits, Albert K Lee, Costas A Anastassiou, Alexandru Andrei, Çağatay Aydın,[...]. Nature 2017
467
10

Imaging large-scale neural activity with cellular resolution in awake, mobile mice.
Daniel A Dombeck, Anton N Khabbaz, Forrest Collman, Thomas L Adelman, David W Tank. Neuron 2007
607
9

Miniaturized integration of a fluorescence microscope.
Kunal K Ghosh, Laurie D Burns, Eric D Cocker, Axel Nimmerjahn, Yaniv Ziv, Abbas El Gamal, Mark J Schnitzer. Nat Methods 2011
435
9

Simultaneous all-optical manipulation and recording of neural circuit activity with cellular resolution in vivo.
Adam M Packer, Lloyd E Russell, Henry W P Dalgleish, Michael Häusser. Nat Methods 2015
249
9

In vivo imaging of neural activity.
Weijian Yang, Rafael Yuste. Nat Methods 2017
152
9

Optimization of a GCaMP calcium indicator for neural activity imaging.
Jasper Akerboom, Tsai-Wen Chen, Trevor J Wardill, Lin Tian, Jonathan S Marvin, Sevinç Mutlu, Nicole Carreras Calderón, Federico Esposti, Bart G Borghuis, Xiaonan Richard Sun,[...]. J Neurosci 2012
701
9

A large field of view two-photon mesoscope with subcellular resolution for in vivo imaging.
Nicholas James Sofroniew, Daniel Flickinger, Jonathan King, Karel Svoboda. Elife 2016
208
9

In vivo dendritic calcium dynamics in neocortical pyramidal neurons.
K Svoboda, W Denk, D Kleinfeld, D W Tank. Nature 1997
502
8

In vivo three-photon imaging of activity of GCaMP6-labeled neurons deep in intact mouse brain.
Dimitre G Ouzounov, Tianyu Wang, Mengran Wang, Danielle D Feng, Nicholas G Horton, Jean C Cruz-Hernández, Yu-Ting Cheng, Jacob Reimer, Andreas S Tolias, Nozomi Nishimura,[...]. Nat Methods 2017
175
8

Whole-brain functional imaging at cellular resolution using light-sheet microscopy.
Misha B Ahrens, Michael B Orger, Drew N Robson, Jennifer M Li, Philipp J Keller. Nat Methods 2013
591
8



A highly sensitive fluorescent indicator dye for calcium imaging of neural activity in vitro and in vivo.
Mayumi Tada, Atsuya Takeuchi, Miki Hashizume, Kazuo Kitamura, Masanobu Kano. Eur J Neurosci 2014
67
10

Targeted bulk-loading of fluorescent indicators for two-photon brain imaging in vivo.
Olga Garaschuk, Ruxandra-Iulia Milos, Arthur Konnerth. Nat Protoc 2006
171
7

Imaging neural activity in worms, flies and mice with improved GCaMP calcium indicators.
Lin Tian, S Andrew Hires, Tianyi Mao, Daniel Huber, M Eugenia Chiappe, Sreekanth H Chalasani, Leopoldo Petreanu, Jasper Akerboom, Sean A McKinney, Eric R Schreiter,[...]. Nat Methods 2009
7

Genetically encoded indicators of neuronal activity.
Michael Z Lin, Mark J Schnitzer. Nat Neurosci 2016
263
7

Automated analysis of cellular signals from large-scale calcium imaging data.
Eran A Mukamel, Axel Nimmerjahn, Mark J Schnitzer. Neuron 2009
325
7

All-Optical Interrogation of Neural Circuits.
Valentina Emiliani, Adam E Cohen, Karl Deisseroth, Michael Häusser. J Neurosci 2015
145
7

Volumetric Ca2+ Imaging in the Mouse Brain Using Hybrid Multiplexed Sculpted Light Microscopy.
Siegfried Weisenburger, Frank Tejera, Jeffrey Demas, Brandon Chen, Jason Manley, Fraser T Sparks, Francisca Martínez Traub, Tanya Daigle, Hongkui Zeng, Attila Losonczy,[...]. Cell 2019
46
15

Population imaging of ongoing neuronal activity in the visual cortex of awake rats.
David S Greenberg, Arthur R Houweling, Jason N D Kerr. Nat Neurosci 2008
270
7


Highly selective receptive fields in mouse visual cortex.
Cristopher M Niell, Michael P Stryker. J Neurosci 2008
584
6

Functional mapping of single spines in cortical neurons in vivo.
Xiaowei Chen, Ulrich Leischner, Nathalie L Rochefort, Israel Nelken, Arthur Konnerth. Nature 2011
236
6

A robust and high-throughput Cre reporting and characterization system for the whole mouse brain.
Linda Madisen, Theresa A Zwingman, Susan M Sunkin, Seung Wook Oh, Hatim A Zariwala, Hong Gu, Lydia L Ng, Richard D Palmiter, Michael J Hawrylycz, Allan R Jones,[...]. Nat Neurosci 2010
6

Thy1-GCaMP6 transgenic mice for neuronal population imaging in vivo.
Hod Dana, Tsai-Wen Chen, Amy Hu, Brenda C Shields, Caiying Guo, Loren L Looger, Douglas S Kim, Karel Svoboda. PLoS One 2014
208
6

Nonlinear magic: multiphoton microscopy in the biosciences.
Warren R Zipfel, Rebecca M Williams, Watt W Webb. Nat Biotechnol 2003
6

Broadly tuned response properties of diverse inhibitory neuron subtypes in mouse visual cortex.
Aaron M Kerlin, Mark L Andermann, Vladimir K Berezovskii, R Clay Reid. Neuron 2010
345
6

Improved deep two-photon calcium imaging in vivo.
Antje Birkner, Carsten H Tischbirek, Arthur Konnerth. Cell Calcium 2017
20
30

Ultrafast neuronal imaging of dopamine dynamics with designed genetically encoded sensors.
Tommaso Patriarchi, Jounhong Ryan Cho, Katharina Merten, Mark W Howe, Aaron Marley, Wei-Hong Xiong, Robert W Folk, Gerard Joey Broussard, Ruqiang Liang, Min Jee Jang,[...]. Science 2018
249
6

A genetically encoded calcium indicator for chronic in vivo two-photon imaging.
Marco Mank, Alexandre Ferrão Santos, Stephan Direnberger, Thomas D Mrsic-Flogel, Sonja B Hofer, Valentin Stein, Thomas Hendel, Dierk F Reiff, Christiaan Levelt, Alexander Borst,[...]. Nat Methods 2008
316
6

Benchmarking Spike Rate Inference in Population Calcium Imaging.
Lucas Theis, Philipp Berens, Emmanouil Froudarakis, Jacob Reimer, Miroslav Román Rosón, Tom Baden, Thomas Euler, Andreas S Tolias, Matthias Bethge. Neuron 2016
77
7


Fast volumetric calcium imaging across multiple cortical layers using sculpted light.
Robert Prevedel, Aart J Verhoef, Alejandro J Pernía-Andrade, Siegfried Weisenburger, Ben S Huang, Tobias Nöbauer, Alma Fernández, Jeroen E Delcour, Peyman Golshani, Andrius Baltuska,[...]. Nat Methods 2016
65
9

Fast high-resolution miniature two-photon microscopy for brain imaging in freely behaving mice.
Weijian Zong, Runlong Wu, Mingli Li, Yanhui Hu, Yijun Li, Jinghang Li, Hao Rong, Haitao Wu, Yangyang Xu, Yang Lu,[...]. Nat Methods 2017
137
6

Fast two-photon in vivo imaging with three-dimensional random-access scanning in large tissue volumes.
Gergely Katona, Gergely Szalay, Pál Maák, Attila Kaszás, Máté Veress, Dániel Hillier, Balázs Chiovini, E Sylvester Vizi, Botond Roska, Balázs Rózsa. Nat Methods 2012
194
6

Fluorescent indicators for Ca2+ based on green fluorescent proteins and calmodulin.
A Miyawaki, J Llopis, R Heim, J M McCaffery, J A Adams, M Ikura, R Y Tsien. Nature 1997
6

Fiji: an open-source platform for biological-image analysis.
Johannes Schindelin, Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig, Mark Longair, Tobias Pietzsch, Stephan Preibisch, Curtis Rueden, Stephan Saalfeld, Benjamin Schmid,[...]. Nat Methods 2012
6

Ultra-compact fiber-optic two-photon microscope for functional fluorescence imaging in vivo.
Christoph J Engelbrecht, Richard S Johnston, Eric J Seibel, Fritjof Helmchen. Opt Express 2008
142
5

Activation of specific interneurons improves V1 feature selectivity and visual perception.
Seung-Hee Lee, Alex C Kwan, Siyu Zhang, Victoria Phoumthipphavong, John G Flannery, Sotiris C Masmanidis, Hiroki Taniguchi, Z Josh Huang, Feng Zhang, Edward S Boyden,[...]. Nature 2012
332
5


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.