A citation-based method for searching scientific literature

Thomas A Pologruto, Bernardo L Sabatini, Karel Svoboda. Biomed Eng Online 2003
Times Cited: 679







List of co-cited articles
631 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Ultrasensitive fluorescent proteins for imaging neuronal activity.
Tsai-Wen Chen, Trevor J Wardill, Yi Sun, Stefan R Pulver, Sabine L Renninger, Amy Baohan, Eric R Schreiter, Rex A Kerr, Michael B Orger, Vivek Jayaraman,[...]. Nature 2013
29

Fiji: an open-source platform for biological-image analysis.
Johannes Schindelin, Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig, Mark Longair, Tobias Pietzsch, Stephan Preibisch, Curtis Rueden, Stephan Saalfeld, Benjamin Schmid,[...]. Nat Methods 2012
22

Independent optical excitation of distinct neural populations.
Nathan C Klapoetke, Yasunobu Murata, Sung Soo Kim, Stefan R Pulver, Amanda Birdsey-Benson, Yong Ku Cho, Tania K Morimoto, Amy S Chuong, Eric J Carpenter, Zhijian Tian,[...]. Nat Methods 2014
855
10

Two-photon laser scanning fluorescence microscopy.
W Denk, J H Strickler, W W Webb. Science 1990
8

NIH Image to ImageJ: 25 years of image analysis.
Caroline A Schneider, Wayne S Rasband, Kevin W Eliceiri. Nat Methods 2012
8

NoRMCorre: An online algorithm for piecewise rigid motion correction of calcium imaging data.
Eftychios A Pnevmatikakis, Andrea Giovannucci. J Neurosci Methods 2017
148
7

High-performance calcium sensors for imaging activity in neuronal populations and microcompartments.
Hod Dana, Yi Sun, Boaz Mohar, Brad K Hulse, Aaron M Kerlin, Jeremy P Hasseman, Getahun Tsegaye, Arthur Tsang, Allan Wong, Ronak Patel,[...]. Nat Methods 2019
192
7

Long-term, high-resolution imaging in the mouse neocortex through a chronic cranial window.
Anthony Holtmaat, Tobias Bonhoeffer, David K Chow, Jyoti Chuckowree, Vincenzo De Paola, Sonja B Hofer, Mark Hübener, Tara Keck, Graham Knott, Wei-Chung A Lee,[...]. Nat Protoc 2009
539
6

Supersensitive Ras activation in dendrites and spines revealed by two-photon fluorescence lifetime imaging.
Ryohei Yasuda, Christopher D Harvey, Haining Zhong, Aleksander Sobczyk, Linda van Aelst, Karel Svoboda. Nat Neurosci 2006
185
6

GABAergic Interneurons in the Neocortex: From Cellular Properties to Circuits.
Robin Tremblay, Soohyun Lee, Bernardo Rudy. Neuron 2016
575
6

Spontaneous behaviors drive multidimensional, brainwide activity.
Carsen Stringer, Marius Pachitariu, Nicholas Steinmetz, Charu Bai Reddy, Matteo Carandini, Kenneth D Harris. Science 2019
220
6

Labelling and optical erasure of synaptic memory traces in the motor cortex.
Akiko Hayashi-Takagi, Sho Yagishita, Mayumi Nakamura, Fukutoshi Shirai, Yi I Wu, Amanda L Loshbaugh, Brian Kuhlman, Klaus M Hahn, Haruo Kasai. Nature 2015
298
5

Structural basis of long-term potentiation in single dendritic spines.
Masanori Matsuzaki, Naoki Honkura, Graham C R Ellis-Davies, Haruo Kasai. Nature 2004
5


Activity in motor-sensory projections reveals distributed coding in somatosensation.
Leopoldo Petreanu, Diego A Gutnisky, Daniel Huber, Ning-long Xu, Dan H O'Connor, Lin Tian, Loren Looger, Karel Svoboda. Nature 2012
199
5

Functional specificity of local synaptic connections in neocortical networks.
Ho Ko, Sonja B Hofer, Bruno Pichler, Katherine A Buchanan, P Jesper Sjöström, Thomas D Mrsic-Flogel. Nature 2011
443
5

Ephus: multipurpose data acquisition software for neuroscience experiments.
Benjamin A Suter, Timothy O'Connor, Vijay Iyer, Leopoldo T Petreanu, Bryan M Hooks, Taro Kiritani, Karel Svoboda, Gordon M G Shepherd. Front Neural Circuits 2010
158
5

Biochemical Computation for Spine Structural Plasticity.
Jun Nishiyama, Ryohei Yasuda. Neuron 2015
105
5

A simple method for organotypic cultures of nervous tissue.
L Stoppini, P A Buchs, D Muller. J Neurosci Methods 1991
5

Imaging large-scale neural activity with cellular resolution in awake, mobile mice.
Daniel A Dombeck, Anton N Khabbaz, Forrest Collman, Thomas L Adelman, David W Tank. Neuron 2007
607
5


A GAL4-driver line resource for Drosophila neurobiology.
Arnim Jenett, Gerald M Rubin, Teri-T B Ngo, David Shepherd, Christine Murphy, Heather Dionne, Barret D Pfeiffer, Amanda Cavallaro, Donald Hall, Jennifer Jeter,[...]. Cell Rep 2012
691
5

Highly selective receptive fields in mouse visual cortex.
Cristopher M Niell, Michael P Stryker. J Neurosci 2008
584
5

Nonlinear magic: multiphoton microscopy in the biosciences.
Warren R Zipfel, Rebecca M Williams, Watt W Webb. Nat Biotechnol 2003
5

Learning Enhances Sensory and Multiple Non-sensory Representations in Primary Visual Cortex.
Jasper Poort, Adil G Khan, Marius Pachitariu, Abdellatif Nemri, Ivana Orsolic, Julija Krupic, Marius Bauza, Maneesh Sahani, Georg B Keller, Thomas D Mrsic-Flogel,[...]. Neuron 2015
151
5

Deep tissue two-photon microscopy.
Fritjof Helmchen, Winfried Denk. Nat Methods 2005
5

Activity-dependent clustering of functional synaptic inputs on developing hippocampal dendrites.
Thomas Kleindienst, Johan Winnubst, Claudia Roth-Alpermann, Tobias Bonhoeffer, Christian Lohmann. Neuron 2011
138
4

The spread of Ras activity triggered by activation of a single dendritic spine.
Christopher D Harvey, Ryohei Yasuda, Haining Zhong, Karel Svoboda. Science 2008
271
4

A pyramid approach to subpixel registration based on intensity.
P Thévenaz, U E Ruttimann, M Unser. IEEE Trans Image Process 1998
4

Synaptic organization of visual space in primary visual cortex.
M Florencia Iacaruso, Ioana T Gasler, Sonja B Hofer. Nature 2017
65
6

Sustained rescue of prefrontal circuit dysfunction by antidepressant-induced spine formation.
R N Moda-Sava, M H Murdock, P K Parekh, R N Fetcho, B S Huang, T N Huynh, J Witztum, D C Shaver, D L Rosenthal, E J Alway,[...]. Science 2019
159
4

A resource of Cre driver lines for genetic targeting of GABAergic neurons in cerebral cortex.
Hiroki Taniguchi, Miao He, Priscilla Wu, Sangyong Kim, Raehum Paik, Ken Sugino, Duda Kvitsiani, Yu Fu, Jiangteng Lu, Ying Lin,[...]. Neuron 2011
963
4

mTOR-dependent synapse formation underlies the rapid antidepressant effects of NMDA antagonists.
Nanxin Li, Boyoung Lee, Rong-Jian Liu, Mounira Banasr, Jason M Dwyer, Masaaki Iwata, Xiao-Yuan Li, George Aghajanian, Ronald S Duman. Science 2010
4

GABAergic lateral interactions tune the early stages of visual processing in Drosophila.
Limor Freifeld, Damon A Clark, Mark J Schnitzer, Mark A Horowitz, Thomas R Clandinin. Neuron 2013
45
8

The Temporal Tuning of the Drosophila Motion Detectors Is Determined by the Dynamics of Their Input Elements.
Alexander Arenz, Michael S Drews, Florian G Richter, Georg Ammer, Alexander Borst. Curr Biol 2017
50
8

Processing properties of ON and OFF pathways for Drosophila motion detection.
Rudy Behnia, Damon A Clark, Adam G Carter, Thomas R Clandinin, Claude Desplan. Nature 2014
108
4

The Emergence of Directional Selectivity in the Visual Motion Pathway of Drosophila.
James A Strother, Shiuan-Tze Wu, Allan M Wong, Aljoscha Nern, Edward M Rogers, Jasmine Q Le, Gerald M Rubin, Michael B Reiser. Neuron 2017
62
6


Defining the computational structure of the motion detector in Drosophila.
Damon A Clark, Limor Bursztyn, Mark A Horowitz, Mark J Schnitzer, Thomas R Clandinin. Neuron 2011
150
4

Choice-specific sequences in parietal cortex during a virtual-navigation decision task.
Christopher D Harvey, Philip Coen, David W Tank. Nature 2012
462
4

Measuring and interpreting neuronal correlations.
Marlene R Cohen, Adam Kohn. Nat Neurosci 2011
513
4


Principles of connectivity among morphologically defined cell types in adult neocortex.
Xiaolong Jiang, Shan Shen, Cathryn R Cadwell, Philipp Berens, Fabian Sinz, Alexander S Ecker, Saumil Patel, Andreas S Tolias. Science 2015
346
4

A neural circuit for spatial summation in visual cortex.
Hillel Adesnik, William Bruns, Hiroki Taniguchi, Z Josh Huang, Massimo Scanziani. Nature 2012
345
4

Two-photon calcium imaging from head-fixed Drosophila during optomotor walking behavior.
Johannes D Seelig, M Eugenia Chiappe, Gus K Lott, Anirban Dutta, Jason E Osborne, Michael B Reiser, Vivek Jayaraman. Nat Methods 2010
170
4

Remote z-scanning with a macroscopic voice coil motor for fast 3D multiphoton laser scanning microscopy.
Peter Rupprecht, Andrew Prendergast, Claire Wyart, Rainer W Friedrich. Biomed Opt Express 2016
27
14

Two-photon calcium imaging in mice navigating a virtual reality environment.
Marcus Leinweber, Pawel Zmarz, Peter Buchmann, Paul Argast, Mark Hübener, Tobias Bonhoeffer, Georg B Keller. J Vis Exp 2014
27
14

Thalamic nuclei convey diverse contextual information to layer 1 of visual cortex.
Morgane M Roth, Johannes C Dahmen, Dylan R Muir, Fabia Imhof, Francisco J Martini, Sonja B Hofer. Nat Neurosci 2016
158
4

Selective attention. Long-range and local circuits for top-down modulation of visual cortex processing.
Siyu Zhang, Min Xu, Tsukasa Kamigaki, Johnny Phong Hoang Do, Wei-Cheng Chang, Sean Jenvay, Kazunari Miyamichi, Liqun Luo, Yang Dan. Science 2014
346
4

The emergence of functional microcircuits in visual cortex.
Ho Ko, Lee Cossell, Chiara Baragli, Jan Antolik, Claudia Clopath, Sonja B Hofer, Thomas D Mrsic-Flogel. Nature 2013
227
4


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.