A citation-based method for searching scientific literature

Alexander W MacFarlane, Robert J Stanley. Biochemistry 2003
Times Cited: 74







List of co-cited articles
823 articles co-cited >1



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  Times     Co-cited
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Direct observation of thymine dimer repair in DNA by photolyase.
Ya-Ting Kao, Chaitanya Saxena, Lijuan Wang, Aziz Sancar, Dongping Zhong. Proc Natl Acad Sci U S A 2005
175
75

Crystal structure of a photolyase bound to a CPD-like DNA lesion after in situ repair.
Alexandra Mees, Tobias Klar, Petra Gnau, Ulrich Hennecke, Andre P M Eker, Thomas Carell, Lars-Oliver Essen. Science 2004
271
68

Crystal structure of DNA photolyase from Escherichia coli.
H W Park, S T Kim, A Sancar, J Deisenhofer. Science 1995
399
51

Dynamics and mechanism of cyclobutane pyrimidine dimer repair by DNA photolyase.
Zheyun Liu, Chuang Tan, Xunmin Guo, Ya-Ting Kao, Jiang Li, Lijuan Wang, Aziz Sancar, Dongping Zhong. Proc Natl Acad Sci U S A 2011
112
33

Crystal structure of DNA photolyase from Anacystis nidulans.
T Tamada, K Kitadokoro, Y Higuchi, K Inaka, A Yasui, P E de Ruiter, A P Eker, K Miki. Nat Struct Biol 1997
161
31

Intraprotein radical transfer during photoactivation of DNA photolyase.
C Aubert, M H Vos, P Mathis, A P Eker, K Brettel. Nature 2000
320
29




Kinetics of cyclobutane thymine dimer splitting by DNA photolyase directly monitored in the UV.
Viruthachalam Thiagarajan, Martin Byrdin, André P M Eker, Pavel Müller, Klaus Brettel. Proc Natl Acad Sci U S A 2011
53
39

Crystal structure of thermostable DNA photolyase: pyrimidine-dimer recognition mechanism.
H Komori, R Masui, S Kuramitsu, S Yokoyama, T Shibata, Y Inoue, K Miki. Proc Natl Acad Sci U S A 2001
90
27


Crystal structure and mechanism of a DNA (6-4) photolyase.
Melanie J Maul, Thomas R M Barends, Andreas F Glas, Max J Cryle, Tatiana Domratcheva, Sabine Schneider, Ilme Schlichting, Thomas Carell. Angew Chem Int Ed Engl 2008
140
27

Dynamics and mechanism of repair of ultraviolet-induced (6-4) photoproduct by photolyase.
Jiang Li, Zheyun Liu, Chuang Tan, Xunmin Guo, Lijuan Wang, Aziz Sancar, Dongping Zhong. Nature 2010
140
27

Computational studies of DNA photolyase.
Christopher B Harrison, Lauren L O'Neil, Olaf Wiest. J Phys Chem A 2005
53
35

Reaction mechanism of (6-4) photolyase.
X Zhao, J Liu, D S Hsu, S Zhao, J S Taylor, A Sancar. J Biol Chem 1997
119
24




Photoselected electron transfer pathways in DNA photolyase.
Tatiana R Prytkova, David N Beratan, Spiros S Skourtis. Proc Natl Acad Sci U S A 2007
55
32

Cyclobutylpyrimidine dimer base flipping by DNA photolyase.
Kathleen S Christine, Alexander W MacFarlane, Kongsheng Yang, Robert J Stanley. J Biol Chem 2002
60
28

Role of two histidines in the (6-4) photolyase reaction.
K Hitomi, H Nakamura, S T Kim, T Mizukoshi, T Ishikawa, S Iwai, T Todo. J Biol Chem 2001
97
22


A new photoreactivating enzyme that specifically repairs ultraviolet light-induced (6-4)photoproducts.
T Todo, H Takemori, H Ryo, M Ihara, T Matsunaga, O Nikaido, K Sato, T Nomura. Nature 1993
225
22

Evidence for dinucleotide flipping by DNA photolyase.
B J Vande Berg, G B Sancar. J Biol Chem 1998
67
25


A QM/MM investigation of thymine dimer radical anion splitting catalyzed by DNA photolyase.
Fanny Masson, Teodoro Laino, Ursula Rothlisberger, Jürg Hutter. Chemphyschem 2009
49
34



Substrate binding modulates the reduction potential of DNA photolyase.
Yvonne M Gindt, Johannes P M Schelvis, Katie L Thoren, Tina H Huang. J Am Chem Soc 2005
37
40

The cryptochromes: blue light photoreceptors in plants and animals.
Inês Chaves, Richard Pokorny, Martin Byrdin, Nathalie Hoang, Thorsten Ritz, Klaus Brettel, Lars-Oliver Essen, Gijsbertus T J van der Horst, Alfred Batschauer, Margaret Ahmad. Annu Rev Plant Biol 2011
505
20

Electron tunneling pathways and role of adenine in repair of cyclobutane pyrimidine dimer by DNA photolyase.
Zheyun Liu, Xunmin Guo, Chuang Tan, Jiang Li, Ya-Ting Kao, Lijuan Wang, Aziz Sancar, Dongping Zhong. J Am Chem Soc 2012
49
30

Origin of the transient electron paramagnetic resonance signals in DNA photolyase.
Y M Gindt, E Vollenbroek, K Westphal, H Sackett, A Sancar, G T Babcock. Biochemistry 1999
62
22


Identification of a new cryptochrome class. Structure, function, and evolution.
Ronald Brudler, Kenichi Hitomi, Hiromi Daiyasu, Hiroyuki Toh, Ken-ichi Kucho, Masahiro Ishiura, Minoru Kanehisa, Victoria A Roberts, Takeshi Todo, John A Tainer,[...]. Mol Cell 2003
229
18



Light-driven DNA repair by photolyases.
L O Essen, T Klar. Cell Mol Life Sci 2006
111
18

Ultrafast dynamics and anionic active states of the flavin cofactor in cryptochrome and photolyase.
Ya-Ting Kao, Chuang Tan, Sang-Hun Song, Nuri Oztürk, Jiang Li, Lijuan Wang, Aziz Sancar, Dongping Zhong. J Am Chem Soc 2008
104
18



Computational study of thymine dimer radical anion splitting in the self-repair process of duplex DNA.
Fanny Masson, Teodoro Laino, Ivano Tavernelli, Ursula Rothlisberger, Jürg Hutter. J Am Chem Soc 2008
42
30

Recognition and repair of UV lesions in loop structures of duplex DNA by DASH-type cryptochrome.
Richard Pokorny, Tobias Klar, Ulrich Hennecke, Thomas Carell, Alfred Batschauer, Lars-Oliver Essen. Proc Natl Acad Sci U S A 2008
127
17

Crystal structure of a DNA decamer containing a cis-syn thymine dimer.
HaJeung Park, Kaijiang Zhang, Yingjie Ren, Sourena Nadji, Nanda Sinha, John-Stephen Taylor, ChulHee Kang. Proc Natl Acad Sci U S A 2002
177
16

Structure of the photolyase-like domain of cryptochrome 1 from Arabidopsis thaliana.
Chad A Brautigam, Barbara S Smith, Zhiquan Ma, Maya Palnitkar, Diana R Tomchick, Mischa Machius, Johann Deisenhofer. Proc Natl Acad Sci U S A 2004
219
16


Investigation of the cyclobutane pyrimidine dimer (CPD) photolyase DNA recognition mechanism by NMR analyses.
Takuya Torizawa, Takumi Ueda, Seiki Kuramitsu, Kenichi Hitomi, Takeshi Todo, Shigenori Iwai, Kosuke Morikawa, Ichio Shimada. J Biol Chem 2004
34
35

Crystal structure of cryptochrome 3 from Arabidopsis thaliana and its implications for photolyase activity.
Yihua Huang, Richard Baxter, Barbara S Smith, Carrie L Partch, Christopher L Colbert, Johann Deisenhofer. Proc Natl Acad Sci U S A 2006
93
16

What is adenine doing in photolyase?
Angela Acocella, Garth A Jones, Francesco Zerbetto. J Phys Chem B 2010
28
42


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.