A citation-based method for searching scientific literature

Akihiro Nishida, Akiko Furukawa, Chieko Koike, Yasuo Tano, Shinichi Aizawa, Isao Matsuo, Takahisa Furukawa. Nat Neurosci 2003
Times Cited: 415







List of co-cited articles
1125 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Functional roles of Otx2 transcription factor in postnatal mouse retinal development.
Chieko Koike, Akihiro Nishida, Shinji Ueno, Hiromitsu Saito, Rikako Sanuki, Shigeru Sato, Akiko Furukawa, Shinichi Aizawa, Isao Matsuo, Noboru Suzuki,[...]. Mol Cell Biol 2007
135
33


Nrl is required for rod photoreceptor development.
A J Mears, M Kondo, P K Swain, Y Takada, R A Bush, T L Saunders, P A Sieving, A Swaroop. Nat Genet 2001
676
25


Crx, a novel Otx-like paired-homeodomain protein, binds to and transactivates photoreceptor cell-specific genes.
S Chen, Q L Wang, Z Nie, H Sun, G Lennon, N G Copeland, D J Gilbert, N A Jenkins, D J Zack. Neuron 1997
550
20

Otx2 and Onecut1 promote the fates of cone photoreceptors and horizontal cells and repress rod photoreceptors.
Mark M Emerson, Natalia Surzenko, Jillian J Goetz, Jeffrey Trimarchi, Constance L Cepko. Dev Cell 2013
73
27


Blimp1 controls photoreceptor versus bipolar cell fate choice during retinal development.
Joseph A Brzezinski, Deepak A Lamba, Thomas A Reh. Development 2010
92
20

Transcriptional regulation of photoreceptor development and homeostasis in the mammalian retina.
Anand Swaroop, Douglas Kim, Douglas Forrest. Nat Rev Neurosci 2010
344
19

An essential role for RAX homeoprotein and NOTCH-HES signaling in Otx2 expression in embryonic retinal photoreceptor cell fate determination.
Yuki Muranishi, Koji Terada, Tatsuya Inoue, Kimiko Katoh, Toshinori Tsujii, Rikako Sanuki, Daisuke Kurokawa, Shinichi Aizawa, Yasuhiro Tamaki, Takahisa Furukawa. J Neurosci 2011
81
22



A new GFP-tagged line reveals unexpected Otx2 protein localization in retinal photoreceptors.
Nicolas Fossat, Coralie Le Greneur, Francis Béby, Stéphane Vincent, Pierre Godement, Gilles Chatelain, Thomas Lamonerie. BMC Dev Biol 2007
47
36

A thyroid hormone receptor that is required for the development of green cone photoreceptors.
L Ng, J B Hurley, B Dierks, M Srinivas, C Saltó, B Vennström, T A Reh, D Forrest. Nat Genet 2001
392
16

Retinopathy and attenuated circadian entrainment in Crx-deficient mice.
T Furukawa, E M Morrow, T Li, F C Davis, C L Cepko. Nat Genet 1999
416
16

Pax6 is required for the multipotent state of retinal progenitor cells.
T Marquardt, R Ashery-Padan, N Andrejewski, R Scardigli, F Guillemot, P Gruss. Cell 2001
680
15

Transcription factor Olig2 defines subpopulations of retinal progenitor cells biased toward specific cell fates.
Brian P Hafler, Natalia Surzenko, Kevin T Beier, Claudio Punzo, Jeffrey M Trimarchi, Jennifer H Kong, Constance L Cepko. Proc Natl Acad Sci U S A 2012
82
18

Cell fate determination in the vertebrate retina.
C L Cepko, C P Austin, X Yang, M Alexiades, D Ezzeddine. Proc Natl Acad Sci U S A 1996
768
14

Retinoid X receptor (gamma) is necessary to establish the S-opsin gradient in cone photoreceptors of the developing mouse retina.
Melanie R Roberts, Anita Hendrickson, Christopher R McGuire, Thomas A Reh. Invest Ophthalmol Vis Sci 2005
152
14

Ocular retardation mouse caused by Chx10 homeobox null allele: impaired retinal progenitor proliferation and bipolar cell differentiation.
M Burmeister, J Novak, M Y Liang, S Basu, L Ploder, N L Hawes, D Vidgen, F Hoover, D Goldman, V I Kalnins,[...]. Nat Genet 1996
417
13

Cell fate determination in the vertebrate retina.
Erin A Bassett, Valerie A Wallace. Trends Neurosci 2012
175
13

Blimp1 suppresses Chx10 expression in differentiating retinal photoreceptor precursors to ensure proper photoreceptor development.
Kimiko Katoh, Yoshihiro Omori, Akishi Onishi, Shigeru Sato, Mineo Kondo, Takahisa Furukawa. J Neurosci 2010
79
16

Dkk3-Cre BAC transgenic mouse line: a tool for highly efficient gene deletion in retinal progenitor cells.
Shigeru Sato, Tatsuya Inoue, Koji Terada, Isao Matsuo, Shinichi Aizawa, Yasuo Tano, Takashi Fujikado, Takahisa Furukawa. Genesis 2007
67
19

Single-Cell RNA-Seq Analysis of Retinal Development Identifies NFI Factors as Regulating Mitotic Exit and Late-Born Cell Specification.
Brian S Clark, Genevieve L Stein-O'Brien, Fion Shiau, Gabrielle H Cannon, Emily Davis-Marcisak, Thomas Sherman, Clayton P Santiago, Thanh V Hoang, Fatemeh Rajaii, Rebecca E James-Esposito,[...]. Neuron 2019
150
13


The homeobox gene Otx2 in development and disease.
Francis Beby, Thomas Lamonerie. Exp Eye Res 2013
79
15

Otx genes are required for tissue specification in the developing eye.
J R Martinez-Morales, M Signore, D Acampora, A Simeone, P Bovolenta. Development 2001
189
12


Photoreceptor cell fate specification in vertebrates.
Joseph A Brzezinski, Thomas A Reh. Development 2015
85
12

Mouse Otx2 functions in the formation and patterning of rostral head.
I Matsuo, S Kuratani, C Kimura, N Takeda, S Aizawa. Genes Dev 1995
562
11


Chx10 is required to block photoreceptor differentiation but is dispensable for progenitor proliferation in the postnatal retina.
Izzy Livne-Bar, Marek Pacal, Melissa C Cheung, Mark Hankin, Judy Trogadis, Danian Chen, Kimberley M Dorval, Rod Bremner. Proc Natl Acad Sci U S A 2006
72
15

Comprehensive Classification of Retinal Bipolar Neurons by Single-Cell Transcriptomics.
Karthik Shekhar, Sylvain W Lapan, Irene E Whitney, Nicholas M Tran, Evan Z Macosko, Monika Kowalczyk, Xian Adiconis, Joshua Z Levin, James Nemesh, Melissa Goldman,[...]. Cell 2016
527
11

Genomic analysis of mouse retinal development.
Seth Blackshaw, Sanjiv Harpavat, Jeff Trimarchi, Li Cai, Haiyan Huang, Winston P Kuo, Griffin Weber, Kyungjoon Lee, Rebecca E Fraioli, Seo-Hee Cho,[...]. PLoS Biol 2004
447
10


Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets.
Evan Z Macosko, Anindita Basu, Rahul Satija, James Nemesh, Karthik Shekhar, Melissa Goldman, Itay Tirosh, Allison R Bialas, Nolan Kamitaki, Emily M Martersteck,[...]. Cell 2015
10

Making the gradient: thyroid hormone regulates cone opsin expression in the developing mouse retina.
Melanie R Roberts, Maya Srinivas, Douglas Forrest, Gabriella Morreale de Escobar, Thomas A Reh. Proc Natl Acad Sci U S A 2006
182
10

Electroporation and RNA interference in the rodent retina in vivo and in vitro.
Takahiko Matsuda, Constance L Cepko. Proc Natl Acad Sci U S A 2004
737
10

Notch 1 inhibits photoreceptor production in the developing mammalian retina.
Ashutosh P Jadhav, Heather A Mason, Constance L Cepko. Development 2006
166
10

Math5 is required for retinal ganglion cell and optic nerve formation.
N L Brown, S Patel, J Brzezinski, T Glaser. Development 2001
366
10

The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis.
Issam Aldiri, Beisi Xu, Lu Wang, Xiang Chen, Daniel Hiler, Lyra Griffiths, Marc Valentine, Abbas Shirinifard, Suresh Thiagarajan, Andras Sablauer,[...]. Neuron 2017
119
10

Molecular Anatomy of the Developing Human Retina.
Akina Hoshino, Rinki Ratnapriya, Matthew J Brooks, Vijender Chaitankar, Matthew S Wilken, Chi Zhang, Margaret R Starostik, Linn Gieser, Anna La Torre, Mario Nishio,[...]. Dev Cell 2017
109
10

Ikaros confers early temporal competence to mouse retinal progenitor cells.
Jimmy Elliott, Christine Jolicoeur, Vasanth Ramamurthy, Michel Cayouette. Neuron 2008
135
10

rax, Hes1, and notch1 promote the formation of Müller glia by postnatal retinal progenitor cells.
T Furukawa, S Mukherjee, Z Z Bao, E M Morrow, C L Cepko. Neuron 2000
388
10


Generation of three-dimensional retinal tissue with functional photoreceptors from human iPSCs.
Xiufeng Zhong, Christian Gutierrez, Tian Xue, Christopher Hampton, M Natalia Vergara, Li-Hui Cao, Ann Peters, Tea Soon Park, Elias T Zambidis, Jason S Meyer,[...]. Nat Commun 2014
475
9

Self-formation of optic cups and storable stratified neural retina from human ESCs.
Tokushige Nakano, Satoshi Ando, Nozomu Takata, Masako Kawada, Keiko Muguruma, Kiyotoshi Sekiguchi, Koichi Saito, Shigenobu Yonemura, Mototsugu Eiraku, Yoshiki Sasai. Cell Stem Cell 2012
812
9

Stimulation of functional neuronal regeneration from Müller glia in adult mice.
Nikolas L Jorstad, Matthew S Wilken, William N Grimes, Stefanie G Wohl, Leah S VandenBosch, Takeshi Yoshimatsu, Rachel O Wong, Fred Rieke, Thomas A Reh. Nature 2017
213
9

Combinatorial regulation of a Blimp1 (Prdm1) enhancer in the mouse retina.
Taylor S Mills, Tatiana Eliseeva, Stephanie M Bersie, Grace Randazzo, Jhenya Nahreini, Ko Uoon Park, Joseph A Brzezinski. PLoS One 2017
14
64

The Sequence Alignment/Map format and SAMtools.
Heng Li, Bob Handsaker, Alec Wysoker, Tim Fennell, Jue Ruan, Nils Homer, Gabor Marth, Goncalo Abecasis, Richard Durbin. Bioinformatics 2009
9


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.