Benjamin P Lewis, I-hung Shih, Matthew W Jones-Rhoades, David P Bartel, Christopher B Burge. Cell 2003
Times Cited: 3788
Times Cited: 3788
Times Cited
Times Co-cited
Similarity
Most mammalian mRNAs are conserved targets of microRNAs.
Robin C Friedman, Kyle Kai-How Farh, Christopher B Burge, David P Bartel. Genome Res 2009
Robin C Friedman, Kyle Kai-How Farh, Christopher B Burge, David P Bartel. Genome Res 2009
18
Human MicroRNA targets.
Bino John, Anton J Enright, Alexei Aravin, Thomas Tuschl, Chris Sander, Debora S Marks. PLoS Biol 2004
Bino John, Anton J Enright, Alexei Aravin, Thomas Tuschl, Chris Sander, Debora S Marks. PLoS Biol 2004
18
Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets.
Benjamin P Lewis, Christopher B Burge, David P Bartel. Cell 2005
Benjamin P Lewis, Christopher B Burge, David P Bartel. Cell 2005
17
The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14.
R C Lee, R L Feinbaum, V Ambros. Cell 1993
R C Lee, R L Feinbaum, V Ambros. Cell 1993
14
Combinatorial microRNA target predictions.
Azra Krek, Dominic Grün, Matthew N Poy, Rachel Wolf, Lauren Rosenberg, Eric J Epstein, Philip MacMenamin, Isabelle da Piedade, Kristin C Gunsalus, Markus Stoffel,[...]. Nat Genet 2005
Azra Krek, Dominic Grün, Matthew N Poy, Rachel Wolf, Lauren Rosenberg, Eric J Epstein, Philip MacMenamin, Isabelle da Piedade, Kristin C Gunsalus, Markus Stoffel,[...]. Nat Genet 2005
13
Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method.
K J Livak, T D Schmittgen. Methods 2001
K J Livak, T D Schmittgen. Methods 2001
13
The 21-nucleotide let-7 RNA regulates developmental timing in Caenorhabditis elegans.
B J Reinhart, F J Slack, M Basson, A E Pasquinelli, J C Bettinger, A E Rougvie, H R Horvitz, G Ruvkun. Nature 2000
B J Reinhart, F J Slack, M Basson, A E Pasquinelli, J C Bettinger, A E Rougvie, H R Horvitz, G Ruvkun. Nature 2000
9
The impact of microRNAs on protein output.
Daehyun Baek, Judit Villén, Chanseok Shin, Fernando D Camargo, Steven P Gygi, David P Bartel. Nature 2008
Daehyun Baek, Judit Villén, Chanseok Shin, Fernando D Camargo, Steven P Gygi, David P Bartel. Nature 2008
9
MicroRNA genes are transcribed by RNA polymerase II.
Yoontae Lee, Minju Kim, Jinju Han, Kyu-Hyun Yeom, Sanghyuk Lee, Sung Hee Baek, V Narry Kim. EMBO J 2004
Yoontae Lee, Minju Kim, Jinju Han, Kyu-Hyun Yeom, Sanghyuk Lee, Sung Hee Baek, V Narry Kim. EMBO J 2004
9
The microRNA.org resource: targets and expression.
Doron Betel, Manda Wilson, Aaron Gabow, Debora S Marks, Chris Sander. Nucleic Acids Res 2008
Doron Betel, Manda Wilson, Aaron Gabow, Debora S Marks, Chris Sander. Nucleic Acids Res 2008
8
MicroRNA targets in Drosophila.
Anton J Enright, Bino John, Ulrike Gaul, Thomas Tuschl, Chris Sander, Debora S Marks. Genome Biol 2003
Anton J Enright, Bino John, Ulrike Gaul, Thomas Tuschl, Chris Sander, Debora S Marks. Genome Biol 2003
8
miRDB: an online database for prediction of functional microRNA targets.
Yuhao Chen, Xiaowei Wang. Nucleic Acids Res 2020
Yuhao Chen, Xiaowei Wang. Nucleic Acids Res 2020
8
Predicting effective microRNA target sites in mammalian mRNAs.
Vikram Agarwal, George W Bell, Jin-Wu Nam, David P Bartel. Elife 2015
Vikram Agarwal, George W Bell, Jin-Wu Nam, David P Bartel. Elife 2015
8
miRDB: an online resource for microRNA target prediction and functional annotations.
Nathan Wong, Xiaowei Wang. Nucleic Acids Res 2015
Nathan Wong, Xiaowei Wang. Nucleic Acids Res 2015
8
Prediction of functional microRNA targets by integrative modeling of microRNA binding and target expression data.
Weijun Liu, Xiaowei Wang. Genome Biol 2019
Weijun Liu, Xiaowei Wang. Genome Biol 2019
8
Rhabdovirus-Inducible MicroRNA-210 Modulates Antiviral Innate Immune Response via Targeting STING/MITA in Fish.
Tianjun Xu, Qing Chu, Junxia Cui. J Immunol 2018
Tianjun Xu, Qing Chu, Junxia Cui. J Immunol 2018
18
Conservation of the sequence and temporal expression of let-7 heterochronic regulatory RNA.
A E Pasquinelli, B J Reinhart, F Slack, M Q Martindale, M I Kuroda, B Maller, D C Hayward, E E Ball, B Degnan, P Müller,[...]. Nature 2000
A E Pasquinelli, B J Reinhart, F Slack, M Q Martindale, M I Kuroda, B Maller, D C Hayward, E E Ball, B Degnan, P Müller,[...]. Nature 2000
8
The role of site accessibility in microRNA target recognition.
Michael Kertesz, Nicola Iovino, Ulrich Unnerstall, Ulrike Gaul, Eran Segal. Nat Genet 2007
Michael Kertesz, Nicola Iovino, Ulrich Unnerstall, Ulrike Gaul, Eran Segal. Nat Genet 2007
7
Principles of microRNA-target recognition.
Julius Brennecke, Alexander Stark, Robert B Russell, Stephen M Cohen. PLoS Biol 2005
Julius Brennecke, Alexander Stark, Robert B Russell, Stephen M Cohen. PLoS Biol 2005
7
miRBase: from microRNA sequences to function.
Ana Kozomara, Maria Birgaoanu, Sam Griffiths-Jones. Nucleic Acids Res 2019
Ana Kozomara, Maria Birgaoanu, Sam Griffiths-Jones. Nucleic Acids Res 2019
7
MicroRNA targeting specificity in mammals: determinants beyond seed pairing.
Andrew Grimson, Kyle Kai-How Farh, Wendy K Johnston, Philip Garrett-Engele, Lee P Lim, David P Bartel. Mol Cell 2007
Andrew Grimson, Kyle Kai-How Farh, Wendy K Johnston, Philip Garrett-Engele, Lee P Lim, David P Bartel. Mol Cell 2007
7
Towards a molecular understanding of microRNA-mediated gene silencing.
Stefanie Jonas, Elisa Izaurralde. Nat Rev Genet 2015
Stefanie Jonas, Elisa Izaurralde. Nat Rev Genet 2015
7
Natural RNA circles function as efficient microRNA sponges.
Thomas B Hansen, Trine I Jensen, Bettina H Clausen, Jesper B Bramsen, Bente Finsen, Christian K Damgaard, Jørgen Kjems. Nature 2013
Thomas B Hansen, Trine I Jensen, Bettina H Clausen, Jesper B Bramsen, Bente Finsen, Christian K Damgaard, Jørgen Kjems. Nature 2013
7
MicroRNA-216a Inhibits NF-κB-Mediated Inflammatory Cytokine Production in Teleost Fish by Modulating p65.
Tianjun Xu, Qing Chu, Junxia Cui, Ruixuan Huo. Infect Immun 2018
Tianjun Xu, Qing Chu, Junxia Cui, Ruixuan Huo. Infect Immun 2018
16
Inducible MicroRNA-217 Inhibits NF-κB- and IRF3-Driven Immune Responses in Lower Vertebrates through Targeting TAK1.
Lei Zhang, Qing Chu, Renjie Chang, Tianjun Xu. J Immunol 2020
Lei Zhang, Qing Chu, Renjie Chang, Tianjun Xu. J Immunol 2020
33
Widespread changes in protein synthesis induced by microRNAs.
Matthias Selbach, Björn Schwanhäusser, Nadine Thierfelder, Zhuo Fang, Raya Khanin, Nikolaus Rajewsky. Nature 2008
Matthias Selbach, Björn Schwanhäusser, Nadine Thierfelder, Zhuo Fang, Raya Khanin, Nikolaus Rajewsky. Nature 2008
7
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2.
Michael I Love, Wolfgang Huber, Simon Anders. Genome Biol 2014
Michael I Love, Wolfgang Huber, Simon Anders. Genome Biol 2014
7
Fast and effective prediction of microRNA/target duplexes.
Marc Rehmsmeier, Peter Steffen, Matthias Hochsmann, Robert Giegerich. RNA 2004
Marc Rehmsmeier, Peter Steffen, Matthias Hochsmann, Robert Giegerich. RNA 2004
6
Microarray analysis shows that some microRNAs downregulate large numbers of target mRNAs.
Lee P Lim, Nelson C Lau, Philip Garrett-Engele, Andrew Grimson, Janell M Schelter, John Castle, David P Bartel, Peter S Linsley, Jason M Johnson. Nature 2005
Lee P Lim, Nelson C Lau, Philip Garrett-Engele, Andrew Grimson, Janell M Schelter, John Castle, David P Bartel, Peter S Linsley, Jason M Johnson. Nature 2005
6
The nuclear RNase III Drosha initiates microRNA processing.
Yoontae Lee, Chiyoung Ahn, Jinju Han, Hyounjeong Choi, Jaekwang Kim, Jeongbin Yim, Junho Lee, Patrick Provost, Olof Rådmark, Sunyoung Kim,[...]. Nature 2003
Yoontae Lee, Chiyoung Ahn, Jinju Han, Hyounjeong Choi, Jaekwang Kim, Jeongbin Yim, Junho Lee, Patrick Provost, Olof Rådmark, Sunyoung Kim,[...]. Nature 2003
6
Inducible MicroRNA-3570 Feedback Inhibits the RIG-I-Dependent Innate Immune Response to Rhabdovirus in Teleost Fish by Targeting MAVS/IPS-1.
Tianjun Xu, Qing Chu, Junxia Cui, Dekun Bi. J Virol 2018
Tianjun Xu, Qing Chu, Junxia Cui, Dekun Bi. J Virol 2018
11
miRecords: an integrated resource for microRNA-target interactions.
Feifei Xiao, Zhixiang Zuo, Guoshuai Cai, Shuli Kang, Xiaolian Gao, Tongbin Li. Nucleic Acids Res 2009
Feifei Xiao, Zhixiang Zuo, Guoshuai Cai, Shuli Kang, Xiaolian Gao, Tongbin Li. Nucleic Acids Res 2009
6
Overview of MicroRNA Biogenesis, Mechanisms of Actions, and Circulation.
Jacob O'Brien, Heyam Hayder, Yara Zayed, Chun Peng. Front Endocrinol (Lausanne) 2018
Jacob O'Brien, Heyam Hayder, Yara Zayed, Chun Peng. Front Endocrinol (Lausanne) 2018
6
RNAhybrid: microRNA target prediction easy, fast and flexible.
Jan Krüger, Marc Rehmsmeier. Nucleic Acids Res 2006
Jan Krüger, Marc Rehmsmeier. Nucleic Acids Res 2006
5
miRWalk--database: prediction of possible miRNA binding sites by "walking" the genes of three genomes.
Harsh Dweep, Carsten Sticht, Priyanka Pandey, Norbert Gretz. J Biomed Inform 2011
Harsh Dweep, Carsten Sticht, Priyanka Pandey, Norbert Gretz. J Biomed Inform 2011
5
MicroInspector: a web tool for detection of miRNA binding sites in an RNA sequence.
Ventsislav Rusinov, Vesselin Baev, Ivan Nikiforov Minkov, Martin Tabler. Nucleic Acids Res 2005
Ventsislav Rusinov, Vesselin Baev, Ivan Nikiforov Minkov, Martin Tabler. Nucleic Acids Res 2005
5
An estimate of the total number of true human miRNAs.
Julia Alles, Tobias Fehlmann, Ulrike Fischer, Christina Backes, Valentina Galata, Marie Minet, Martin Hart, Masood Abu-Halima, Friedrich A Grässer, Hans-Peter Lenhof,[...]. Nucleic Acids Res 2019
Julia Alles, Tobias Fehlmann, Ulrike Fischer, Christina Backes, Valentina Galata, Marie Minet, Martin Hart, Masood Abu-Halima, Friedrich A Grässer, Hans-Peter Lenhof,[...]. Nucleic Acids Res 2019
5
MicroRNA therapeutics: towards a new era for the management of cancer and other diseases.
Rajesha Rupaimoole, Frank J Slack. Nat Rev Drug Discov 2017
Rajesha Rupaimoole, Frank J Slack. Nat Rev Drug Discov 2017
5
The biochemical basis of microRNA targeting efficacy.
Sean E McGeary, Kathy S Lin, Charlie Y Shi, Thy M Pham, Namita Bisaria, Gina M Kelley, David P Bartel. Science 2019
Sean E McGeary, Kathy S Lin, Charlie Y Shi, Thy M Pham, Namita Bisaria, Gina M Kelley, David P Bartel. Science 2019
5
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome.
Ben Langmead, Cole Trapnell, Mihai Pop, Steven L Salzberg. Genome Biol 2009
Ben Langmead, Cole Trapnell, Mihai Pop, Steven L Salzberg. Genome Biol 2009
5
Exportin-5 mediates the nuclear export of pre-microRNAs and short hairpin RNAs.
Rui Yi, Yi Qin, Ian G Macara, Bryan R Cullen. Genes Dev 2003
Rui Yi, Yi Qin, Ian G Macara, Bryan R Cullen. Genes Dev 2003
5
Posttranscriptional regulation of the heterochronic gene lin-14 by lin-4 mediates temporal pattern formation in C. elegans.
B Wightman, I Ha, G Ruvkun. Cell 1993
B Wightman, I Ha, G Ruvkun. Cell 1993
5
Gene silencing by microRNAs: contributions of translational repression and mRNA decay.
Eric Huntzinger, Elisa Izaurralde. Nat Rev Genet 2011
Eric Huntzinger, Elisa Izaurralde. Nat Rev Genet 2011
5
Processing of primary microRNAs by the Microprocessor complex.
Ahmet M Denli, Bastiaan B J Tops, Ronald H A Plasterk, René F Ketting, Gregory J Hannon. Nature 2004
Ahmet M Denli, Bastiaan B J Tops, Ronald H A Plasterk, René F Ketting, Gregory J Hannon. Nature 2004
5
The genome of the miiuy croaker reveals well-developed innate immune and sensory systems.
Tianjun Xu, Guoliang Xu, Rongbo Che, Rixin Wang, Yanjin Wang, Jinrui Li, Shanchen Wang, Chang Shu, Yuena Sun, Tianxing Liu,[...]. Sci Rep 2016
Tianjun Xu, Guoliang Xu, Rongbo Che, Rixin Wang, Yanjin Wang, Jinrui Li, Shanchen Wang, Chang Shu, Yuena Sun, Tianxing Liu,[...]. Sci Rep 2016
6
Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.